FFCP PHASE1:Hg19::chr1:34630758..34630772,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114784 | |EntrezGene=114784 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19290 | |HGNC=19290 | ||
|TSSclassifier=strong | |||
|UniProt=E7EUA6,Q53TY4 | |UniProt=E7EUA6,Q53TY4 | ||
|association_with_transcript=102bp_to_ENST00000373381,uc001bxm.1_5end | |association_with_transcript=102bp_to_ENST00000373381,uc001bxm.1_5end | ||
|cluster_id=chr1:34630758..34630772,- | |||
|coexpression_cluster_id=C1856 | |||
|description=CAGE_peak_2_at_CSMD2_5end | |description=CAGE_peak_2_at_CSMD2_5end | ||
|id=chr1:34630758..34630772,- | |id=chr1:34630758..34630772,- | ||
|ontology_enrichment_celltype=CL:0000055!5.13e-13!180;CL:0002620!1.01e-09!23;CL:0000133!2.04e-08!59;CL:0002319!1.65e-07!25;CL:0000057!3.24e-07!75 | |ontology_enrichment_celltype=CL:0000055!5.13e-13!180;CL:0002620!1.01e-09!23;CL:0000133!2.04e-08!59;CL:0002319!1.65e-07!25;CL:0000057!3.24e-07!75 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.59e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060072;4.69e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060072,6.72e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001017!2.23e-31!82;UBERON:0005743!6.97e-31!86;UBERON:0000073!3.83e-30!94;UBERON:0001016!3.83e-30!94;UBERON:0001049!3.54e-27!57;UBERON:0005068!3.54e-27!57;UBERON:0006241!3.54e-27!57;UBERON:0007135!3.54e-27!57;UBERON:0000955!7.21e-24!69;UBERON:0006238!7.21e-24!69;UBERON:0002616!2.75e-22!59;UBERON:0002346!6.42e-21!90;UBERON:0003075!4.39e-20!86;UBERON:0007284!4.39e-20!86;UBERON:0002020!8.75e-20!34;UBERON:0003528!8.75e-20!34;UBERON:0001893!1.93e-19!34;UBERON:0001869!8.96e-19!32;UBERON:0002791!9.65e-19!33;UBERON:0002780!2.60e-18!41;UBERON:0001890!2.60e-18!41;UBERON:0006240!2.60e-18!41;UBERON:0003080!1.55e-17!42;UBERON:0000924!1.75e-16!173;UBERON:0006601!1.75e-16!173;UBERON:0004121!1.10e-15!169;UBERON:0000475!1.70e-15!365;UBERON:0000956!1.03e-14!25;UBERON:0000203!1.03e-14!25;UBERON:0001950!2.32e-13!20;UBERON:0003056!2.61e-13!61;UBERON:0002619!5.18e-13!22;UBERON:0000033!1.18e-12!123;UBERON:0000153!2.56e-12!129;UBERON:0007811!2.56e-12!129;UBERON:0007023!4.01e-12!115;UBERON:0003076!3.60e-11!15;UBERON:0003057!3.60e-11!15;UBERON:0000025!6.91e-11!194;UBERON:0004732!9.77e-10!13;UBERON:0004733!3.90e-09!12;UBERON:0002028!3.90e-09!12;UBERON:0007277!3.90e-09!12;UBERON:0002199!1.01e-08!45;UBERON:0002416!1.01e-08!45;UBERON:0002097!1.56e-08!40;UBERON:0000468!2.78e-08!659;UBERON:0004111!8.83e-08!241;UBERON:0002680!3.51e-07!9;UBERON:0001895!3.51e-07!9;UBERON:0010092!3.51e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.70e-23;32!UBERON:0003528;1.45e-22;34!UBERON:0002020;1.45e-22;34!UBERON:0000956;3.41e-22;25!UBERON:0000203;3.41e-22;25!UBERON:0002791;2.23e-21;32!UBERON:0001950;1.04e-20;20!UBERON:0002619;1.05e-20;22!UBERON:0001893;3.23e-20;34!UBERON:0000073;3.47e-16;53!UBERON:0002616;3.47e-16;53!UBERON:0002780;4.16e-14;41!UBERON:0001890;4.16e-14;41!UBERON:0004732;1.12e-13;13!UBERON:0004733;1.68e-12;12!UBERON:0002028;1.68e-12;12!UBERON:0001017;1.85e-12;75!UBERON:0000955;3.03e-12;68!UBERON:0001016;6.09e-10;83!UBERON:0002021;1.20e-09;5!UBERON:0002680;9.78e-09;9!UBERON:0001895;9.78e-09;9!UBERON:0002037;3.39e-07;6!UBERON:0002298;6.41e-07;6!UBERON:0000200;8.53e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.62e-33,56;UBERON:0005068,1.62e-33,56;UBERON:0006241,1.62e-33,56;UBERON:0007135,1.62e-33,56;UBERON:0001017,7.22e-32,81;UBERON:0000073,7.25e-30,53;UBERON:0002616,7.25e-30,53;UBERON:0001016,9.23e-29,89;UBERON:0003528,3.98e-27,34;UBERON:0002020,3.98e-27,34;UBERON:0001869,1.27e-26,32;UBERON:0001893,1.20e-24,34;UBERON:0002346,1.36e-24,86;UBERON:0002791,2.54e-24,32;UBERON:0000955,5.83e-24,68;UBERON:0006238,5.83e-24,68;UBERON:0003075,1.87e-23,82;UBERON:0007284,1.87e-23,82;UBERON:0000956,9.13e-23,25;UBERON:0000203,9.13e-23,25;UBERON:0002619,2.27e-21,22;UBERON:0001950,2.38e-21,20;UBERON:0002780,3.02e-19,41;UBERON:0001890,3.02e-19,41;UBERON:0003080,3.02e-19,41;UBERON:0006240,3.02e-19,41;UBERON:0010371,2.44e-18,104;UBERON:0003076,1.31e-16,15;UBERON:0003057,1.31e-16,15;UBERON:0010314,1.51e-14,132;UBERON:0004121,4.93e-14,171;UBERON:0000924,4.93e-14,171;UBERON:0006601,4.93e-14,171;UBERON:0004732,7.35e-14,13;UBERON:0003056,7.00e-13,61;UBERON:0004733,1.08e-12,12;UBERON:0002028,1.08e-12,12;UBERON:0007277,1.08e-12,12;UBERON:0000025,1.32e-12,192;UBERON:0002021,8.17e-10,5;UBERON:0002680,5.82e-09,9;UBERON:0001895,5.82e-09,9;UBERON:0010092,5.82e-09,9;UBERON:0004111,6.57e-08,240;UBERON:0002037,2.72e-07,6;UBERON:0006215,2.72e-07,6;UBERON:0000200,4.00e-07,6;UBERON:0007023,4.48e-07,114;UBERON:0011216,4.68e-07,223;UBERON:0002298,5.10e-07,6 | |||
|phase1_expression=0.726713517082227,0.642301571672949,2.39622486963151,0,2.68176656656373,0.872338524100369,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0.730310090387373,0.487932798790507,2.70866327768933,1.42800483870977,0.313454721478088,1.43117993565528,2.05311637609326,0.753255837568817,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0,0,0,0.283604451492204,0.443458794925128,0.175669571386252,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.25326102332916,7.81214166797991,2.29469296599051,0.709336764396714,0.560677600142307,0,0.24666754841716,0.622422070799533,0,0,0,0,0,0.624320153660641,0.570471821544449,0,1.29177948508141,0.971237666208789,0.98315564691574,0,0,0,0,0,0.910161361938026,0,0,0.125118519871964,0,0,0,0.300476117813194,0,6.27863724911017,0.640672166455702,0.635795703478686,4.50136644126603,0.618315175430633,2.57640540045629,0.744467425326359,3.71307930930786,1.36411807225678,3.78650661366172,0.644349290496095,0,8.87523981291536,2.11579406278045,1.3564847384839,0,0,0,1.82960559194393,1.06023814657188,0.69716365721711,0.725627385107593,1.26160425437814,1.09493207722749,0,1.92972281457866,8.28809528114883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0,0,0,0,0,0.579652024875384,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.2933531432838,0.904902010304444,3.57656445851882,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0,0,2.41151501647669,2.61460037580088,0.799783929456456,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,3.81141936333695,1.30139853857622,0.773288812777695,1.67516265334349,4.46557126157214,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0.234282829985426,0,0,0,0,0.184369168541703,1.73767228936166,0,0,0,0,0,0,0,0,0.496215615637554,2.455391572609,0.280660094433074,0.384417447767103,1.53512174720011,0.804269605718038,0,1.07946785661859,0.710246901252508,1.23190734020714,0,1.04589340613963,0,0.200506470303285,0,0.574072240823034,0,0.262248829918848,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,3.21367859688319,0,0,0,0,0,0,0.170453254832202,0.267096106940212,0,0,0,0.10115778085555,0,5.98143458978216,0,0.308033580176089,2.66153015158511,3.47973196830029,1.11194531462352,0.715624433709956,0.372158369359667,0,0,0,0,1.27281299170375,0.78494864019923,0,0.274537029736055,0.117812402345686,2.22400729730648,3.17020642346017,0,0,0.487426979262569,0,0.545999645631943,0.141405431953713,3.39024349860728,0,3.98063385144732,3.94605796728386,0.578775534266688,0,1.62328301570163,0.92947049429925,0.281695602532241,0.286822704408103,0,2.1400263088875,1.06428319221179,0,0,0,0,0,0,0,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0.962479855263359,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,1.9882952955326,0.984685914873589,0,0.824019371133798,0.844501632511974,0.996239941255349,0.276283915531148,0,0.818149460017238,0,0.933118762985422,0,0,0,0.295930216910801,0,0,5.81599647657131,0.927680981618513,15.9691038400955,0,0,0,0,0,0,0.689486746482929,0,1.04174996959975,1.77148277162768,1.32656082487949,1.52581736317083,2.54332297841817,3.54657142744257,0.219385397153973,0,2.23077990845765,0.230850775511391,1.93701494939902,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.943615861729479,0,0.937057782901357,0,0,0,0.789168805698781,0,9.48825561054519,0.505492637027904,0.450970258243478,0.207376382794494,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,1.39100228192093,2.089256266544,0,0,1.06726497369676,0,0.144090417154106,0,0,0,0,0,0.543616824294456,0.209205692624666,0.611989305817931,0,1.20084057741958,0.958337652243951,0,0,0,0.558564802544508,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,1.63444087333891,2.57205037544031,1.65047323916681,0.415440338029185,0,0,2.24773359634691,2.34804281319486,0.157611414598396,0.577000469484979,0,0,0,0.714695326373367,0,0,1.08599920350743,2.5926644736038,2.28611152076586,0,0.082092520749339,0,0,0,0,3.74920573448497,1.85125642439766,0,0,0.213574825135389,0,0,0,0,0,1.27668251554036,0,0,0,0.327872630709804,0.157054096250234,1.77213635993397,0.854183854313742,2.754200475543,1.72022758707021,1.22021956690538,2.11127770000704,0.276697269872462,0,0,0,0,0,0.869526171664951,0.74627401443437,1.63599316893057,0.554805861502613,0.189403005275089,0.251567901752575,0.889811221596536,0.228840068396924,0.907385542579434,0.15543720058278,0.147855149989634,0.955780602982214,1.34940933649081,0.776314784381297,0.829412415681711,0.53168342911599,1.04349012362347,0.901545653983311,7.23529903120711,0.813741466409323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| ||
|short_description=p2@CSMD2 | |short_description=p2@CSMD2 | ||
}} | }} |
Latest revision as of 17:36, 17 September 2015
Short description: | p2@CSMD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CSMD2_5end |
Coexpression cluster: | C1856_brain_parietal_temporal_occipital_duodenum_Fibroblast_neuroectodermal |
Association with transcript: | 102bp_to_ENST00000373381, uc001bxm.1_5end |
EntrezGene: | CSMD2 |
HGNC: | 19290 |
UniProt: | E7EUA6Q53TY4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.59e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
benign neoplasm | 6.72e-07 | 4 |