FFCP PHASE1:Hg19::chr6:30652466..30652492,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=170954 | |EntrezGene=170954 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29413 | |HGNC=29413 | ||
|TSSclassifier=strong | |||
|UniProt=Q6NYC8 | |UniProt=Q6NYC8 | ||
|association_with_transcript=0bp_to_BC006176,DQ988947_5end | |association_with_transcript=0bp_to_BC006176,DQ988947_5end | ||
|cluster_id=chr6:30652466..30652492,- | |||
|coexpression_cluster_id=C4589 | |||
|description=CAGE_peak_8_at_PPP1R18_5end | |description=CAGE_peak_8_at_PPP1R18_5end | ||
|id=chr6:30652466..30652492,- | |id=chr6:30652466..30652492,- | ||
|ontology_enrichment_celltype=CL:0000037!2.88e-47!172;CL:0000566!2.88e-47!172;CL:0000988!1.09e-44!182;CL:0002032!7.60e-44!165;CL:0000837!7.60e-44!165;CL:0000738!4.32e-38!140;CL:0002087!1.36e-31!119;CL:0002031!3.53e-30!124;CL:0000763!3.78e-27!112;CL:0000049!3.78e-27!112;CL:0000766!2.52e-21!76;CL:0000048!8.44e-18!430;CL:0000134!2.89e-17!358;CL:0000723!7.60e-17!436;CL:0000034!1.08e-16!444;CL:0000557!2.13e-16!71;CL:0002320!2.63e-16!365;CL:0000839!7.33e-16!70;CL:0002194!3.01e-15!63;CL:0000576!3.01e-15!63;CL:0000040!3.01e-15!63;CL:0000559!3.01e-15!63;CL:0000838!5.66e-15!52;CL:0000542!7.84e-15!53;CL:0000051!7.84e-15!53;CL:0002009!1.68e-14!65;CL:0002057!5.84e-13!42;CL:0000219!6.16e-12!390;CL:0000115!1.16e-11!35;CL:0002139!6.73e-11!24;CL:0000860!1.25e-10!45;CL:0000084!5.58e-10!25;CL:0000827!5.58e-10!25;CL:0000071!2.16e-09!18;CL:0002546!2.16e-09!18;CL:0000791!4.83e-09!18;CL:0000789!4.83e-09!18;CL:0002420!4.83e-09!18;CL:0002419!4.83e-09!18;CL:0000790!4.83e-09!18;CL:0000625!7.79e-08!11;CL:0002078!8.09e-08!44;CL:0002371!1.46e-07!591 | |ontology_enrichment_celltype=CL:0000037!2.88e-47!172;CL:0000566!2.88e-47!172;CL:0000988!1.09e-44!182;CL:0002032!7.60e-44!165;CL:0000837!7.60e-44!165;CL:0000738!4.32e-38!140;CL:0002087!1.36e-31!119;CL:0002031!3.53e-30!124;CL:0000763!3.78e-27!112;CL:0000049!3.78e-27!112;CL:0000766!2.52e-21!76;CL:0000048!8.44e-18!430;CL:0000134!2.89e-17!358;CL:0000723!7.60e-17!436;CL:0000034!1.08e-16!444;CL:0000557!2.13e-16!71;CL:0002320!2.63e-16!365;CL:0000839!7.33e-16!70;CL:0002194!3.01e-15!63;CL:0000576!3.01e-15!63;CL:0000040!3.01e-15!63;CL:0000559!3.01e-15!63;CL:0000838!5.66e-15!52;CL:0000542!7.84e-15!53;CL:0000051!7.84e-15!53;CL:0002009!1.68e-14!65;CL:0002057!5.84e-13!42;CL:0000219!6.16e-12!390;CL:0000115!1.16e-11!35;CL:0002139!6.73e-11!24;CL:0000860!1.25e-10!45;CL:0000084!5.58e-10!25;CL:0000827!5.58e-10!25;CL:0000071!2.16e-09!18;CL:0002546!2.16e-09!18;CL:0000791!4.83e-09!18;CL:0000789!4.83e-09!18;CL:0002420!4.83e-09!18;CL:0002419!4.83e-09!18;CL:0000790!4.83e-09!18;CL:0000625!7.79e-08!11;CL:0002078!8.09e-08!44;CL:0002371!1.46e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000115;2.27e-15;36!CL:0002139;1.24e-14;24!CL:0000071;2.31e-12;18!CL:0000084;3.52e-12;25!CL:0000763;6.60e-12;100!CL:0000791;6.83e-12;18!CL:0000789;6.83e-12;18!CL:0002419;6.83e-12;18!CL:0000473;1.62e-11;39!CL:0000234;1.62e-11;39!CL:0000766;5.39e-11;69!CL:0000576;1.60e-10;48!CL:0000860;2.86e-10;33!CL:0002057;2.86e-10;33!CL:0000542;2.89e-10;53!CL:0002087;3.15e-10;104!CL:0000625;3.43e-10;11!CL:0000988;4.40e-10;177!CL:0000738;5.01e-10;136!CL:0000094;1.20e-08;8!CL:0002078;2.47e-08;45!CL:1000413;3.09e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.59e-57,168;CL:0000988,1.38e-53,177;CL:0002032,9.64e-53,161;CL:0000837,9.64e-53,161;CL:0000738,5.65e-46,136;CL:0002087,1.19e-38,115;CL:0002031,4.53e-37,120;CL:0000763,3.12e-34,108;CL:0000049,3.12e-34,108;CL:0000766,8.86e-29,72;CL:0000557,1.16e-21,67;CL:0000839,4.74e-21,66;CL:0002194,2.78e-20,59;CL:0000576,2.78e-20,59;CL:0000040,2.78e-20,59;CL:0000559,2.78e-20,59;CL:0002009,4.97e-19,61;CL:0000473,1.20e-18,48;CL:0000234,1.20e-18,48;CL:0000115,1.12e-17,36;CL:0000838,1.27e-16,52;CL:0000542,5.09e-16,53;CL:0000051,5.09e-16,53;CL:0000860,1.20e-15,42;CL:0002057,1.20e-15,42;CL:0000048,2.11e-15,427;CL:0000134,3.56e-15,354;CL:0000034,8.42e-15,441;CL:0002139,1.73e-14,24;CL:0000723,1.84e-14,433;CL:0002320,2.54e-14,361;CL:0002078,1.90e-12,45;CL:0000071,2.11e-12,18;CL:0002546,2.11e-12,18;CL:0000084,4.15e-12,25;CL:0000827,4.15e-12,25;CL:0000791,6.40e-12,18;CL:0000789,6.40e-12,18;CL:0002420,6.40e-12,18;CL:0002419,6.40e-12,18;CL:0000790,6.40e-12,18;CL:0000219,9.78e-11,386;CL:0000625,2.98e-10,11;CL:0000213,2.23e-09,58;CL:0000215,2.23e-09,58;CL:0000094,1.18e-08,8;CL:1000413,2.95e-07,9;CL:0000236,9.36e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002546;2.31e-12;18!CL:0000790;6.83e-12;18!CL:0002057;2.09e-11;42!CL:0000051;2.89e-10;53!CL:0000049;1.70e-09;108 | |||
|ontology_enrichment_disease=DOID:1240!5.20e-09!39;DOID:2531!5.77e-09!51;DOID:0060083!5.77e-09!51;DOID:8692!5.32e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.00e-08;31!DOID:1240;5.11e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,4.40e-09,39;DOID:8692,9.69e-09,31;DOID:2531,2.48e-07,51;DOID:0060083,2.48e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002193!2.38e-22!112;UBERON:0003081!1.20e-20!216;UBERON:0002390!2.33e-20!102;UBERON:0003061!2.33e-20!102;UBERON:0002384!1.63e-15!375;UBERON:0002371!3.55e-14!80;UBERON:0002405!1.04e-13!115;UBERON:0001474!2.07e-12!86;UBERON:0000055!1.96e-10!69;UBERON:0001981!1.17e-09!60;UBERON:0007500!1.17e-09!60;UBERON:0004537!1.17e-09!60;UBERON:0006965!1.17e-09!60;UBERON:0004535!1.56e-09!110;UBERON:0001986!2.16e-09!18;UBERON:0004638!2.16e-09!18;UBERON:0004852!2.16e-09!18;UBERON:0004765!2.91e-09!101;UBERON:0001434!2.91e-09!101;UBERON:0001009!3.03e-09!113;UBERON:0004872!7.52e-08!84;UBERON:0002049!7.91e-08!79;UBERON:0007798!7.91e-08!79;UBERON:0002204!1.47e-07!167;UBERON:0000487!1.53e-07!22 | |ontology_enrichment_uberon=UBERON:0002193!2.38e-22!112;UBERON:0003081!1.20e-20!216;UBERON:0002390!2.33e-20!102;UBERON:0003061!2.33e-20!102;UBERON:0002384!1.63e-15!375;UBERON:0002371!3.55e-14!80;UBERON:0002405!1.04e-13!115;UBERON:0001474!2.07e-12!86;UBERON:0000055!1.96e-10!69;UBERON:0001981!1.17e-09!60;UBERON:0007500!1.17e-09!60;UBERON:0004537!1.17e-09!60;UBERON:0006965!1.17e-09!60;UBERON:0004535!1.56e-09!110;UBERON:0001986!2.16e-09!18;UBERON:0004638!2.16e-09!18;UBERON:0004852!2.16e-09!18;UBERON:0004765!2.91e-09!101;UBERON:0001434!2.91e-09!101;UBERON:0001009!3.03e-09!113;UBERON:0004872!7.52e-08!84;UBERON:0002049!7.91e-08!79;UBERON:0007798!7.91e-08!79;UBERON:0002204!1.47e-07!167;UBERON:0000487!1.53e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.31e-12;18!UBERON:0001986;2.31e-12;18!UBERON:0004852;2.31e-12;18!UBERON:0000487;8.08e-10;22!UBERON:0006914;7.41e-08;25!UBERON:0007500;1.89e-07;56!UBERON:0001981;1.89e-07;56!UBERON:0004537;1.89e-07;56!UBERON:0003915;3.09e-07;9!UBERON:0004700;3.09e-07;9!UBERON:0001917;3.09e-07;9!UBERON:0000055;3.41e-07;65 | |||
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| ||
|short_description=p8@PPP1R18 | |short_description=p8@PPP1R18 | ||
}} | }} |
Latest revision as of 17:35, 17 September 2015
Short description: | p8@PPP1R18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PPP1R18_5end |
Coexpression cluster: | C4589_Neutrophils_Eosinophils_acute_CD8_Whole_thymus_CD4 |
Association with transcript: | 0bp_to_BC006176, DQ988947_5end |
EntrezGene: | PPP1R18 |
HGNC: | 29413 |
UniProt: | Q6NYC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukemia | 4.40e-09 | 39 |
myeloid leukemia | 9.69e-09 | 31 |
hematologic cancer | 2.48e-07 | 51 |
immune system cancer | 2.48e-07 | 51 |