FFCP PHASE1:Hg19::chr11:34073872..34073895,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:34073872..34073895,+
|short_description=p4@CAPRIN1
|description=CAGE_peak_4_at_CAPRIN1_5end
|association_with_transcript=0bp_to_ENST00000530820_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4076 | |EntrezGene=4076 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6743 | |HGNC=6743 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000530820_5end | |||
|cluster_id=chr11:34073872..34073895,+ | |||
|description=CAGE_peak_4_at_CAPRIN1_5end | |||
|id=chr11:34073872..34073895,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.17e-17!254;CL:0002321!4.30e-15!248;CL:0000220!2.66e-14!246;CL:0000012!1.43e-13!682;CL:0000548!2.50e-13!679;CL:0000004!2.50e-13!679;CL:0000255!2.50e-13!679;CL:0000076!2.53e-10!62;CL:0002319!1.85e-07!25;CL:0000133!9.71e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.05e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.09e-17,253;CL:0002321,4.42e-15,250;CL:0000076,7.55e-10,63;CL:0002319,1.85e-07,25;CL:0000133,9.71e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.50e-42!235;DOID:14566!4.67e-42!239;DOID:0050687!1.04e-26!143;DOID:305!2.76e-22!106;DOID:0050686!9.70e-18!137;DOID:2531!7.42e-10!51;DOID:0060083!7.42e-10!51;DOID:1240!2.01e-09!39;DOID:8692!4.74e-09!31;DOID:3095!3.99e-07!22;DOID:2994!3.99e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:8692;7.48e-09;31!DOID:1240;7.10e-08;39!DOID:305;2.26e-07;106!DOID:3095;3.98e-07;22!DOID:2994;3.98e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.50e-42,235;DOID:14566,4.67e-42,239;DOID:0050687,1.04e-26,143;DOID:305,2.76e-22,106;DOID:0050686,9.70e-18,137;DOID:2531,7.42e-10,51;DOID:0060083,7.42e-10,51;DOID:1240,2.01e-09,39;DOID:8692,4.74e-09,31;DOID:3095,3.99e-07,22;DOID:2994,3.99e-07,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p4@CAPRIN1 | |||
}} | }} |
Latest revision as of 17:27, 17 September 2015
Short description: | p4@CAPRIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CAPRIN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000530820_5end |
EntrezGene: | CAPRIN1 |
HGNC: | 6743 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.09e-17 | 253 |
embryonic cell | 4.42e-15 | 250 |
squamous epithelial cell | 7.55e-10 | 63 |
neural cell | 1.85e-07 | 25 |
neurectodermal cell | 9.71e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.50e-42 | 235 |
disease of cellular proliferation | 4.67e-42 | 239 |
cell type cancer | 1.04e-26 | 143 |
carcinoma | 2.76e-22 | 106 |
organ system cancer | 9.70e-18 | 137 |
hematologic cancer | 7.42e-10 | 51 |
immune system cancer | 7.42e-10 | 51 |
leukemia | 2.01e-09 | 39 |
myeloid leukemia | 4.74e-09 | 31 |
germ cell and embryonal cancer | 3.99e-07 | 22 |
germ cell cancer | 3.99e-07 | 22 |