FFCP PHASE1:Hg19::chr6:30594622..30594665,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79969 | |EntrezGene=79969 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21186 | |HGNC=21186 | ||
|TSSclassifier=strong | |||
|UniProt=Q5SQI0,B7Z4Q7 | |UniProt=Q5SQI0,B7Z4Q7 | ||
|association_with_transcript=0bp_to_ENST00000319027,ENST00000329992,ENST00000330083,ENST00000376478,ENST00000376483,ENST00000376485,NM_001031722,NM_001190724,uc003nqv.2,uc011dmm.1_5end | |association_with_transcript=0bp_to_ENST00000319027,ENST00000329992,ENST00000330083,ENST00000376478,ENST00000376483,ENST00000376485,NM_001031722,NM_001190724,uc003nqv.2,uc011dmm.1_5end | ||
|cluster_id=chr6:30594622..30594665,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_ATAT1_5end | |description=CAGE_peak_1_at_ATAT1_5end | ||
|id=chr6:30594622..30594665,+ | |id=chr6:30594622..30594665,+ | ||
|ontology_enrichment_celltype=CL:0002319!1.19e-07!25;CL:0000133!1.42e-07!59 | |ontology_enrichment_celltype=CL:0002319!1.19e-07!25;CL:0000133!1.42e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.28e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.19e-07,25;CL:0000133,1.42e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.87e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.20e-39!94;UBERON:0001016!5.20e-39!94;UBERON:0005743!5.08e-38!86;UBERON:0001017!7.85e-37!82;UBERON:0002346!8.66e-37!90;UBERON:0003075!7.80e-35!86;UBERON:0007284!7.80e-35!86;UBERON:0001049!1.67e-33!57;UBERON:0005068!1.67e-33!57;UBERON:0006241!1.67e-33!57;UBERON:0007135!1.67e-33!57;UBERON:0000955!7.96e-32!69;UBERON:0006238!7.96e-32!69;UBERON:0002616!2.16e-29!59;UBERON:0003056!3.36e-29!61;UBERON:0000924!2.15e-26!173;UBERON:0006601!2.15e-26!173;UBERON:0002780!6.17e-26!41;UBERON:0001890!6.17e-26!41;UBERON:0006240!6.17e-26!41;UBERON:0003080!2.95e-25!42;UBERON:0004121!1.03e-24!169;UBERON:0000033!2.25e-22!123;UBERON:0000153!3.06e-22!129;UBERON:0007811!3.06e-22!129;UBERON:0001893!5.29e-22!34;UBERON:0002020!8.99e-22!34;UBERON:0003528!8.99e-22!34;UBERON:0002791!2.24e-21!33;UBERON:0001869!7.98e-21!32;UBERON:0000025!2.44e-20!194;UBERON:0000119!1.34e-19!312;UBERON:0000483!4.53e-19!309;UBERON:0000956!1.71e-16!25;UBERON:0000203!1.71e-16!25;UBERON:0004111!8.28e-16!241;UBERON:0000475!8.53e-16!365;UBERON:0002619!2.12e-15!22;UBERON:0000477!8.28e-15!286;UBERON:0001950!3.56e-14!20;UBERON:0000481!6.07e-12!347;UBERON:0000064!1.86e-11!219;UBERON:0003076!2.74e-09!15;UBERON:0003057!2.74e-09!15;UBERON:0004732!3.91e-08!13;UBERON:0004733!1.46e-07!12;UBERON:0002028!1.46e-07!12;UBERON:0007277!1.46e-07!12;UBERON:0007023!2.84e-07!115;UBERON:0002420!5.15e-07!9;UBERON:0007245!5.15e-07!9;UBERON:0010009!5.15e-07!9;UBERON:0010011!5.15e-07!9;UBERON:0000454!5.15e-07!9;UBERON:0002308!9.91e-07!9;UBERON:0000125!9.91e-07!9 | |ontology_enrichment_uberon=UBERON:0000073!5.20e-39!94;UBERON:0001016!5.20e-39!94;UBERON:0005743!5.08e-38!86;UBERON:0001017!7.85e-37!82;UBERON:0002346!8.66e-37!90;UBERON:0003075!7.80e-35!86;UBERON:0007284!7.80e-35!86;UBERON:0001049!1.67e-33!57;UBERON:0005068!1.67e-33!57;UBERON:0006241!1.67e-33!57;UBERON:0007135!1.67e-33!57;UBERON:0000955!7.96e-32!69;UBERON:0006238!7.96e-32!69;UBERON:0002616!2.16e-29!59;UBERON:0003056!3.36e-29!61;UBERON:0000924!2.15e-26!173;UBERON:0006601!2.15e-26!173;UBERON:0002780!6.17e-26!41;UBERON:0001890!6.17e-26!41;UBERON:0006240!6.17e-26!41;UBERON:0003080!2.95e-25!42;UBERON:0004121!1.03e-24!169;UBERON:0000033!2.25e-22!123;UBERON:0000153!3.06e-22!129;UBERON:0007811!3.06e-22!129;UBERON:0001893!5.29e-22!34;UBERON:0002020!8.99e-22!34;UBERON:0003528!8.99e-22!34;UBERON:0002791!2.24e-21!33;UBERON:0001869!7.98e-21!32;UBERON:0000025!2.44e-20!194;UBERON:0000119!1.34e-19!312;UBERON:0000483!4.53e-19!309;UBERON:0000956!1.71e-16!25;UBERON:0000203!1.71e-16!25;UBERON:0004111!8.28e-16!241;UBERON:0000475!8.53e-16!365;UBERON:0002619!2.12e-15!22;UBERON:0000477!8.28e-15!286;UBERON:0001950!3.56e-14!20;UBERON:0000481!6.07e-12!347;UBERON:0000064!1.86e-11!219;UBERON:0003076!2.74e-09!15;UBERON:0003057!2.74e-09!15;UBERON:0004732!3.91e-08!13;UBERON:0004733!1.46e-07!12;UBERON:0002028!1.46e-07!12;UBERON:0007277!1.46e-07!12;UBERON:0007023!2.84e-07!115;UBERON:0002420!5.15e-07!9;UBERON:0007245!5.15e-07!9;UBERON:0010009!5.15e-07!9;UBERON:0010011!5.15e-07!9;UBERON:0000454!5.15e-07!9;UBERON:0002308!9.91e-07!9;UBERON:0000125!9.91e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.31e-19;32!UBERON:0001893;4.36e-19;34!UBERON:0002791;4.87e-19;32!UBERON:0003528;6.21e-19;34!UBERON:0002020;6.21e-19;34!UBERON:0002780;7.25e-19;41!UBERON:0001890;7.25e-19;41!UBERON:0000073;2.10e-18;53!UBERON:0002616;2.10e-18;53!UBERON:0000956;1.41e-16;25!UBERON:0000203;1.41e-16;25!UBERON:0002619;1.85e-15;22!UBERON:0000955;2.19e-14;68!UBERON:0001017;2.22e-14;75!UBERON:0001950;3.11e-14;20!UBERON:0001016;3.80e-13;83!UBERON:0004732;3.72e-08;13!UBERON:0004733;1.40e-07;12!UBERON:0002028;1.40e-07;12!UBERON:0002420;4.95e-07;9!UBERON:0007245;4.95e-07;9!UBERON:0010009;4.95e-07;9!UBERON:0010011;4.95e-07;9!UBERON:0000454;4.95e-07;9!UBERON:0000125;9.53e-07;9!UBERON:0002308;9.53e-07;9 | |||
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| ||
|short_description=p1@ATAT1 | |short_description=p1@ATAT1 | ||
}} | }} |
Latest revision as of 17:16, 17 September 2015
Short description: | p1@ATAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ATAT1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000319027, ENST00000329992, ENST00000330083, ENST00000376478, ENST00000376483, ENST00000376485, NM_001031722, NM_001190724, uc003nqv.2, uc011dmm.1_5end |
EntrezGene: | ATAT1 |
HGNC: | 21186 |
UniProt: | Q5SQI0B7Z4Q7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.19e-07 | 25 |
neurectodermal cell | 1.42e-07 | 59 |