FFCP PHASE1:Hg19::chr17:74733404..74733422,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6427 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10783 | |||
|TSSclassifier=strong | |||
|UniProt=B3KUY1,Q01130,Q8NAK9,F5GYB8 | |||
|association_with_transcript=0bp_to_ENST00000358156,ENST00000359995,ENST00000392485,ENST00000452355,uc002jsv.2,uc002jsx.1,uc002jsy.3,uc010wtg.1_5end | |||
|cluster_id=chr17:74733404..74733422,- | |||
|description=CAGE_peak_1_at_SRSF2_5end | |||
|id=chr17:74733404..74733422,- | |||
|ontology_enrichment_celltype=CL:0000037!2.87e-34!172;CL:0000566!2.87e-34!172;CL:0000988!7.04e-34!182;CL:0002032!9.89e-32!165;CL:0000837!9.89e-32!165;CL:0000012!9.81e-27!682;CL:0000548!1.01e-24!679;CL:0000004!1.01e-24!679;CL:0000255!1.01e-24!679;CL:0000738!3.82e-24!140;CL:0000003!1.06e-23!722;CL:0002031!3.71e-22!124;CL:0002087!3.49e-21!119;CL:0000063!7.21e-21!578;CL:0000219!4.62e-17!390;CL:0000763!1.75e-16!112;CL:0000049!1.75e-16!112;CL:0000144!6.80e-16!625;CL:0000542!5.72e-15!53;CL:0000051!5.72e-15!53;CL:0000838!1.74e-14!52;CL:0000134!2.31e-14!358;CL:0002320!1.35e-12!365;CL:0002371!7.15e-12!591;CL:0000034!5.36e-11!444;CL:0000860!8.02e-10!45;CL:0000048!1.51e-09!430;CL:0000723!2.13e-09!436;CL:0002057!2.19e-09!42;CL:0000557!1.35e-08!71;CL:0000766!1.78e-08!76;CL:0000839!3.61e-08!70;CL:0002009!5.61e-08!65;CL:0000084!6.44e-08!25;CL:0000827!6.44e-08!25;CL:0002194!3.02e-07!63;CL:0000576!3.02e-07!63;CL:0000040!3.02e-07!63;CL:0000559!3.02e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000542;3.57e-09;53!CL:0000084;6.58e-08;25!CL:0002087;1.44e-07;104!CL:0000860;5.65e-07;33!CL:0002057;5.65e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.87e-34,168;CL:0000988,3.29e-34,177;CL:0002032,6.52e-32,161;CL:0000837,6.52e-32,161;CL:0000738,2.59e-24,136;CL:0002031,2.34e-22,120;CL:0002087,2.18e-21,115;CL:0000763,1.27e-16,108;CL:0000049,1.27e-16,108;CL:0000219,1.48e-16,386;CL:0000542,5.72e-15,53;CL:0000051,5.72e-15,53;CL:0000838,1.74e-14,52;CL:0000134,6.53e-14,354;CL:0002320,3.58e-12,361;CL:0000034,2.57e-10,441;CL:0000860,2.19e-09,42;CL:0002057,2.19e-09,42;CL:0000048,6.35e-09,427;CL:0000723,8.88e-09,433;CL:0000557,1.08e-08,67;CL:0000473,1.43e-08,48;CL:0000234,1.43e-08,48;CL:0000766,1.50e-08,72;CL:0000839,2.97e-08,66;CL:0002009,4.47e-08,61;CL:0000084,6.44e-08,25;CL:0000827,6.44e-08,25;CL:0002194,2.51e-07,59;CL:0000576,2.51e-07,59;CL:0000040,2.51e-07,59;CL:0000559,2.51e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000051;3.57e-09;53!CL:0002057;6.06e-07;42 | |||
|ontology_enrichment_disease=DOID:2531!1.37e-15!51;DOID:0060083!1.37e-15!51;DOID:162!1.82e-13!235;DOID:1240!2.61e-12!39;DOID:14566!2.62e-12!239;DOID:0050686!1.25e-09!137;DOID:8692!3.87e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;4.29e-10;39!DOID:2531;1.53e-09;51!DOID:0060083;1.53e-09;51!DOID:8692;8.28e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.37e-15,51;DOID:0060083,1.37e-15,51;DOID:162,1.82e-13,235;DOID:1240,2.61e-12,39;DOID:14566,2.62e-12,239;DOID:0050686,1.25e-09,137;DOID:8692,3.87e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0002384!5.03e-12!375;UBERON:0002371!2.12e-07!80;UBERON:0001474!2.21e-07!86;UBERON:0002390!6.69e-07!102;UBERON:0003061!6.69e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.31e-11,371;UBERON:0002371,1.97e-07,76;UBERON:0001474,2.12e-07,82;UBERON:0002390,6.96e-07,98;UBERON:0003061,6.96e-07,98;UBERON:0002405,7.86e-07,93 | |||
|phase1_expression=166.780752170371,119.68219285506,168.017649682398,112.082094155506,138.110978178032,74.1487745485313,103.852950049007,120.658495824525,98.4669818313391,261.460908437605,496.136630428396,321.545699775614,181.999214977633,119.310764253485,86.8261124407139,98.1594713819592,107.279625988268,94.9403117503585,121.495266898836,449.145619864122,312.937060368684,267.690332142287,226.126429833535,267.589501017489,291.635551778727,281.812640398444,334.067298471829,304.21716977737,381.563348543437,322.800523799756,317.063420551324,192.159035916096,253.314177692508,95.766288633198,639.56920799097,481.811528899872,394.3053900267,353.449070643338,342.329371831532,389.75152380567,126.960073894037,157.088428019205,161.499880906635,187.854524503198,241.462728017149,308.081757708527,254.509795411725,309.609419680435,470.753683760557,223.536988834311,220.554368321556,374.114887683742,340.608732567779,384.063386732377,572.854038294066,272.763149997234,266.902214756573,409.670912143389,323.530674236044,465.347089260336,510.191026387635,184.716728104561,209.636304160335,283.013234353709,286.146309287784,335.892053017155,511.337066425367,211.300127480921,239.360659554872,365.094447949301,300.278153306151,406.210232494284,544.315306398321,306.320165152316,289.779660852354,388.287811481512,299.805116529995,288.189457362851,266.000845983668,269.622055579221,238.501095961709,304.683808479409,239.354892467399,219.547721727377,249.062591081795,370.828563410295,199.397201543934,225.877708902112,227.399436237993,218.478309788598,335.266438805465,469.789751496751,517.215677653435,531.328740887684,572.83975136713,573.123768470568,562.393232755449,451.962377161539,365.970668219126,225.033022795853,393.06225356011,355.08585430105,512.394295712807,217.9188536674,342.332064485761,316.350401465411,308.987208555883,222.366531043772,269.482968144068,261.127392510638,326.093020987301,243.434592017444,366.860957262937,344.86012740764,436.958489504803,262.877675058354,457.182048867092,416.132836479465,424.820062900745,229.048532899026,269.548549896557,233.8112029343,233.391434570548,208.746162792856,228.623229590793,231.804929751093,248.801783067077,709.050915921384,714.867643329315,602.179871344678,107.275021178143,208.587967367831,174.020946669045,243.971427859582,203.041853807535,149.191914529648,180.5299099806,138.204303165949,246.263198712397,162.527648340059,205.796902878994,142.898171368004,141.346571857506,282.537745401735,146.370874538262,147.139628017881,137.345573215988,306.460452232364,438.148101657578,315.73887613013,207.50795329084,241.725921224821,231.195574070658,192.770008196087,194.647738401396,285.02229144991,197.91823331036,149.623303559041,122.383594364228,172.71583618657,252.171152510326,276.739046481539,203.059631880077,372.442700390365,172.560234898815,271.381874255318,185.461261789216,250.560544075392,329.630770551649,467.038704507519,355.960988456781,807.813958883068,1140.07397659608,226.768907114118,171.95229528658,198.303381266732,301.892932254139,230.329806461297,210.673019025824,206.890034452511,434.468412619899,108.53372130355,155.294306664483,137.809017527291,180.461941037258,201.456736195404,183.80011990912,214.872752991592,189.169006559174,212.78598943608,166.635278815258,233.107479807873,250.417444937499,265.873377087356,101.668777284937,178.478263053999,72.5346983853873,127.11630572918,133.524141810421,204.786306436056,137.974683228718,242.572340207809,216.58015789837,159.588930518889,183.053667907309,191.554872374387,125.899493363728,319.765324328099,322.542564968574,154.401992115824,201.547238002743,355.908039956101,177.250350290115,288.81504539115,212.917683643339,403.037881392144,174.80198725919,242.083989500106,174.986857319011,122.851003182297,268.742261535077,191.428986632517,209.916013280384,225.535415641567,243.016793446434,178.105653736571,277.49018144483,386.456804425451,281.073147801365,185.449627422498,376.715030357313,693.821959603153,208.077877998655,159.523752671836,196.151588320522,92.8735856063958,51.2534431985406,328.183063310527,410.3351356501,460.331067077451,341.028963688562,352.528940541513,429.697091210196,292.449107399397,337.30469855047,390.13361714364,241.37683366226,315.543991057753,200.436543518392,232.273763989156,195.20275362562,220.153296535788,242.814651646057,664.401964619049,214.737813696276,223.552856818979,170.990944666639,110.153718192467,168.28549981707,144.80832822794,253.153053226122,174.709043926969,318.972265875854,169.374321668587,89.7002423961678,221.458130865487,191.676002206717,132.036381650811,377.717702224533,406.92244083297,154.624279822886,163.100972802049,197.679445844009,248.394660064959,142.784808969031,133.69391669957,98.4248164504303,107.534557250166,241.147705194918,167.998164122517,229.190073736427,380.032435786235,210.415131988764,305.001719158134,166.173989362606,108.484712858551,130.111366403152,215.551281988609,187.454519198159,132.451288509168,117.188837378537,505.935452566268,299.504567288463,456.090799520488,153.445526604482,225.323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| |||
|short_description=p1@SRSF2 | |||
}} |
Latest revision as of 16:59, 17 September 2015
Short description: | p1@SRSF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SRSF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000358156, ENST00000359995, ENST00000392485, ENST00000452355, uc002jsv.2, uc002jsx.1, uc002jsy.3, uc010wtg.1_5end |
EntrezGene: | SRSF2 |
HGNC: | 10783 |
UniProt: | B3KUY1Q01130Q8NAK9F5GYB8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.31e-11 | 371 |
bone marrow | 1.97e-07 | 76 |
bone element | 2.12e-07 | 82 |
hematopoietic system | 6.96e-07 | 98 |
blood island | 6.96e-07 | 98 |
immune system | 7.86e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.37e-15 | 51 |
immune system cancer | 1.37e-15 | 51 |
cancer | 1.82e-13 | 235 |
leukemia | 2.61e-12 | 39 |
disease of cellular proliferation | 2.62e-12 | 239 |
organ system cancer | 1.25e-09 | 137 |
myeloid leukemia | 3.87e-09 | 31 |