FFCP PHASE1:Hg19::chr7:20370652..20370663,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:20370652..20370663,+ to FFCP PHASE1:Hg19::chr7:20370652..20370663,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3696 | |EntrezGene=3696 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6163 | |HGNC=6163 | ||
|TSSclassifier=strong | |||
|UniProt=P26012,Q9BUG9 | |UniProt=P26012,Q9BUG9 | ||
|association_with_transcript=-61bp_to_ENST00000478974,NM_002214,uc003sut.2,uc003suu.2_5end | |||
|cluster_id=chr7:20370652..20370663,+ | |||
|coexpression_cluster_id=C1537 | |||
|description=CAGE_peak_12_at_ITGB8_5end | |||
|id=chr7:20370652..20370663,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000128;1.51e-07;7!CL:0000126;1.51e-07;7!CL:0000127;1.51e-07;7!CL:0002605;1.90e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.46e-07,3;CL:0000128,3.00e-07,7;CL:0000126,3.00e-07,7;CL:0000127,3.00e-07,7;CL:0002453,3.00e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0006241;5.02e-07;3!UBERON:0003057;5.02e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.86e-27!57;UBERON:0005068!6.86e-27!57;UBERON:0006241!6.86e-27!57;UBERON:0007135!6.86e-27!57;UBERON:0001017!2.23e-26!82;UBERON:0005743!9.23e-26!86;UBERON:0000073!6.75e-24!94;UBERON:0001016!6.75e-24!94;UBERON:0000033!2.24e-22!123;UBERON:0000153!1.15e-21!129;UBERON:0007811!1.15e-21!129;UBERON:0003075!1.75e-21!86;UBERON:0007284!1.75e-21!86;UBERON:0002780!5.43e-21!41;UBERON:0001890!5.43e-21!41;UBERON:0006240!5.43e-21!41;UBERON:0002346!6.19e-21!90;UBERON:0002616!1.11e-20!59;UBERON:0000955!1.63e-20!69;UBERON:0006238!1.63e-20!69;UBERON:0003080!4.88e-20!42;UBERON:0004121!5.98e-20!169;UBERON:0000924!8.46e-20!173;UBERON:0006601!8.46e-20!173;UBERON:0003056!3.93e-18!61;UBERON:0002020!4.04e-18!34;UBERON:0003528!4.04e-18!34;UBERON:0001893!6.57e-18!34;UBERON:0002791!2.44e-17!33;UBERON:0001869!1.24e-16!32;UBERON:0007023!9.23e-16!115;UBERON:0004111!4.52e-14!241;UBERON:0000467!8.67e-14!625;UBERON:0000477!9.81e-14!286;UBERON:0000480!1.30e-13!626;UBERON:0000468!2.85e-13!659;UBERON:0000922!3.65e-13!612;UBERON:0000956!8.32e-13!25;UBERON:0000203!8.32e-13!25;UBERON:0002050!8.84e-13!605;UBERON:0005423!8.84e-13!605;UBERON:0000062!1.00e-12!511;UBERON:0000923!1.85e-12!604;UBERON:0005291!1.85e-12!604;UBERON:0006598!1.85e-12!604;UBERON:0002532!1.85e-12!604;UBERON:0002619!8.27e-11!22;UBERON:0000025!2.18e-10!194;UBERON:0000475!5.81e-10!365;UBERON:0001950!1.87e-09!20;UBERON:0000483!2.23e-08!309;UBERON:0003076!5.24e-08!15;UBERON:0003057!5.24e-08!15;UBERON:0000119!6.40e-08!312;UBERON:0000481!6.71e-08!347;UBERON:0000064!1.60e-07!219;UBERON:0002420!6.53e-07!9;UBERON:0007245!6.53e-07!9;UBERON:0010009!6.53e-07!9;UBERON:0010011!6.53e-07!9;UBERON:0000454!6.53e-07!9;UBERON:0002308!7.17e-07!9;UBERON:0000125!7.17e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;6.22e-21;34!UBERON:0002020;6.22e-21;34!UBERON:0002791;4.27e-20;32!UBERON:0001869;1.24e-19;32!UBERON:0001893;2.63e-19;34!UBERON:0000073;1.34e-18;53!UBERON:0002616;1.34e-18;53!UBERON:0002780;2.67e-18;41!UBERON:0001890;2.67e-18;41!UBERON:0000956;8.97e-15;25!UBERON:0000203;8.97e-15;25!UBERON:0001017;1.26e-12;75!UBERON:0001016;7.84e-12;83!UBERON:0000955;8.31e-12;68!UBERON:0002420;5.64e-11;9!UBERON:0000125;5.64e-11;9!UBERON:0007245;5.64e-11;9!UBERON:0002308;5.64e-11;9!UBERON:0010009;5.64e-11;9!UBERON:0010011;5.64e-11;9!UBERON:0000454;5.64e-11;9!UBERON:0000349;7.16e-11;5!UBERON:0004733;1.44e-10;12!UBERON:0002028;1.44e-10;12!UBERON:0002619;1.70e-10;22!UBERON:0004732;1.25e-09;13!UBERON:0002298;2.40e-09;6!UBERON:0001950;6.69e-08;20!UBERON:0001896;1.34e-07;3!UBERON:0005290;1.34e-07;3!UBERON:0009663;1.51e-07;7!UBERON:0002240;5.02e-07;3!UBERON:0005174;5.02e-07;3!UBERON:0001137;5.02e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.96e-38,56;UBERON:0005068,3.96e-38,56;UBERON:0006241,3.96e-38,56;UBERON:0007135,3.96e-38,56;UBERON:0001017,1.13e-35,81;UBERON:0000073,2.31e-33,53;UBERON:0002616,2.31e-33,53;UBERON:0003075,3.91e-31,82;UBERON:0007284,3.91e-31,82;UBERON:0001016,6.20e-31,89;UBERON:0002346,3.78e-29,86;UBERON:0000955,3.70e-27,68;UBERON:0006238,3.70e-27,68;UBERON:0002780,1.88e-24,41;UBERON:0001890,1.88e-24,41;UBERON:0003080,1.88e-24,41;UBERON:0006240,1.88e-24,41;UBERON:0003528,7.38e-24,34;UBERON:0002020,7.38e-24,34;UBERON:0010371,1.29e-23,104;UBERON:0001893,1.89e-23,34;UBERON:0003056,6.74e-22,61;UBERON:0002791,9.74e-21,32;UBERON:0001869,1.66e-20,32;UBERON:0004121,1.06e-16,171;UBERON:0000924,1.06e-16,171;UBERON:0006601,1.06e-16,171;UBERON:0010314,4.56e-16,132;UBERON:0003076,4.53e-15,15;UBERON:0003057,4.53e-15,15;UBERON:0000956,1.07e-14,25;UBERON:0000203,1.07e-14,25;UBERON:0000025,4.20e-12,192;UBERON:0002420,2.06e-11,9;UBERON:0007245,2.06e-11,9;UBERON:0010009,2.06e-11,9;UBERON:0010011,2.06e-11,9;UBERON:0000454,2.06e-11,9;UBERON:0000125,2.54e-11,9;UBERON:0002308,2.54e-11,9;UBERON:0000349,3.61e-11,5;UBERON:0007023,1.52e-10,114;UBERON:0002619,1.77e-10,22;UBERON:0004733,3.77e-10,12;UBERON:0002028,3.77e-10,12;UBERON:0007277,3.77e-10,12;UBERON:0004732,2.98e-09,13;UBERON:0004111,3.75e-09,240;UBERON:0002298,3.78e-09,6;UBERON:0011216,5.00e-09,223;UBERON:0000483,6.27e-08,306;UBERON:0001950,7.65e-08,20;UBERON:0009663,7.68e-08,7;UBERON:0000119,1.00e-07,309;UBERON:0000489,1.27e-07,31;UBERON:0001896,2.57e-07,3;UBERON:0005290,2.57e-07,3;UBERON:0010096,2.57e-07,3;UBERON:0002240,3.39e-07,3;UBERON:0005174,3.39e-07,3;UBERON:0001137,3.39e-07,3 | |||
|phase1_expression=0,0,0.422863212287913,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0,0.123121058076788,1.02000345622126,1.25381888591235,2.57612388417951,1.23186982565596,2.13422487311165,0.305653622991805,0.246301768349837,0.157421562627358,0.393364276848904,0,0.154816123316076,0.919421224478927,0.6024118375565,0,0,0,0,0.553995408531877,1.00272223735071,0.434021741431704,0,0,0,0,0,0,0.697287110717054,0,0,0,0,0,0.689491361473237,1.29096936716765,1.35426486594342,0.188242339542605,0,0,2.75475503133812,0.962787081228281,0.639337125799041,0,0,0,2.03146467040009,1.70215567407342,0.622822248995575,0.251248665256743,0,0,0.605399502633369,1.10483290796269,1.58231193720442,0,0,0,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0,1.41802225746102,1.10864698731282,0.87834785693126,0.589405839739707,0.364295288292542,0,0.649094787309367,0.522389211897802,0.398873881556595,0,0,0,0.198762407366705,0,0,0.56530794192401,0.419499436209906,0,0,0,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0.25326102332916,2.38336525463794,2.29469296599051,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0.168336113954066,0,0,0,0.919463387397059,0.600952235626387,0,0.179389635688862,0,0,0.300091096084402,0.206105058476878,0,0.18611685633159,0,0,0.252433774244115,0.184099797284599,0.161646056818812,0.355009592516614,0,0,0.386521706326594,0.545492241181669,0.573609190778008,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0.928735856063958,0,0.236613600079688,0,0.482022059766964,0.220587945464788,0,0.237270619111097,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0.686271241194102,0.548751427043128,0,0,0.370353780634118,0,0,1.44331342025273,0.695582429850461,0.117408694235822,0.288732895522148,0.462985512576611,0.380508304469197,0.790204397959275,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0.503946384596579,0.567100388969546,0.53735113621709,0.581267877027924,0.383382679165211,0,0,0.414656231081544,0.576479813667846,0,0.698476837213859,2.29193055334967,1.17217447210047,0,1.02827492703324,1.50171528921959,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0.904318131178758,0,1.29964888536674,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0,0,0,0,0,3.04913549066956,1.30139853857622,1.54657762555539,0.670065061337395,2.55175500661265,0,0,0,0.12269149171914,0,0,0,0,0.315404830067869,0.35142424497814,0,0,0,0,0.184369168541703,0,0,0,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0.182091168006717,0.131124414959424,0,1.92538342761037,0.784349769176855,2.92278449306521,1.05551628892876,0,0,0,0,0.541892875087706,1.50506932156456,1.52925763827023,0.831076008928724,0.895499018888713,0.219259876645935,0,0.256450125116389,0,0,0.103041011647722,0.0915694648183434,0,0,0.650060246036521,1.6068392984416,0,0,0.15350367472613,0.137836572484531,0,0,0,0,0.165284915360978,0,0.127612712494584,0.10115778085555,0.464845549297286,1.25924938732256,0,0.616067160352178,0,0.869932992075073,0.18532421910392,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0.274537029736055,0,0,0,0.421258456238981,0,0.487426979262569,0,0.136499911407986,0.424216295861138,0,1.10273068709225,0,0.438450885253763,0,0,0.608731130888112,0.30982349809975,0,0,0,0,0,0,0.658589785919804,0,0,0,0.670302275535787,0,0.376575203107117,0,0,0,0.229723400206959,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0.962479855263359,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,2.98244294329889,1.40669416410513,0.779160935160341,0,0,0.398495976502139,0,1.0077309914171,0.102268682502155,0,0,0.0898683511473268,0,0,0.197286811273867,0,0,0.969332746095218,1.57705766875147,1.99613798001194,0,0,0,1.82069517256799,0.254253650292766,0,0,0,0.173624994933292,2.65722415744152,0.60298219312704,0,0.552896299656123,2.06883333267483,1.97446857438575,0,0.557694977114413,0.384751292518985,0.569710279235006,0.46112780877612,0,0,0,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0.843992258112108,9.30427006507142,0,0,0,0.265372693510018,0,0,0.494255755786011,0.417687798021821,1.21322039365219,0,0.702793337176017,0,0,0.242780379534093,0.789168805698781,2.41981432097328,1.22429104652196,0.126373159256976,0,0,0,0.330991955875499,0,0,8.25367683486399,0,4.85967267338367,0.195984794828755,0.0870592065804026,2.97035336011451,0.171986032471617,0.19351266257817,0.146178634172371,0.492692742319255,0.193978032976839,0.176512253383001,0.90392296312213,0,0,1.01297273529406,0,0.400794101257669,0.640358984218058,0.19980960958213,0,0.343609788497747,0,0,0,1.88555227693436,0.135904206073614,0.209205692624666,0.101998217636322,0,2.40168115483916,0.547621515567972,0,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| ||
|short_description=p12@ITGB8 | |||
}} | }} |
Latest revision as of 16:34, 17 September 2015
Short description: | p12@ITGB8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ITGB8_5end |
Coexpression cluster: | C1537_clear_endometrial_serous_Neural_Fibroblast_CD14_melanoma |
Association with transcript: | -61bp_to_ENST00000478974, NM_002214, uc003sut.2, uc003suu.2_5end |
EntrezGene: | ITGB8 |
HGNC: | 6163 |
UniProt: | P26012Q9BUG9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.46e-07 | 3 |
oligodendrocyte | 3.00e-07 | 7 |
macroglial cell | 3.00e-07 | 7 |
astrocyte | 3.00e-07 | 7 |
oligodendrocyte precursor cell | 3.00e-07 | 7 |