FFCP PHASE1:Hg19::chr16:70680361..70680370,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=146433 | |EntrezGene=146433 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28529 | |HGNC=28529 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZMJ4 | |UniProt=Q6ZMJ4 | ||
|association_with_transcript=-97bp_to_ENST00000288098,uc002ezh.1,uc002ezi.1_5end | |association_with_transcript=-97bp_to_ENST00000288098,uc002ezh.1,uc002ezi.1_5end | ||
|cluster_id=chr16:70680361..70680370,+ | |||
|description=CAGE_peak_6_at_IL34_5end | |description=CAGE_peak_6_at_IL34_5end | ||
|id=chr16:70680361..70680370,+ | |id=chr16:70680361..70680370,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.64e-38;7!UBERON:0006215;3.66e-23;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.77e-40!57;UBERON:0005068!2.77e-40!57;UBERON:0006241!2.77e-40!57;UBERON:0007135!2.77e-40!57;UBERON:0002616!8.26e-39!59;UBERON:0000955!1.16e-35!69;UBERON:0006238!1.16e-35!69;UBERON:0005743!5.64e-31!86;UBERON:0007023!2.29e-30!115;UBERON:0001017!1.67e-29!82;UBERON:0003075!2.07e-28!86;UBERON:0007284!2.07e-28!86;UBERON:0000073!1.06e-27!94;UBERON:0001016!1.06e-27!94;UBERON:0002780!4.90e-27!41;UBERON:0001890!4.90e-27!41;UBERON:0006240!4.90e-27!41;UBERON:0002346!5.59e-27!90;UBERON:0003080!2.41e-26!42;UBERON:0001893!7.14e-24!34;UBERON:0002791!1.07e-20!33;UBERON:0000033!1.58e-20!123;UBERON:0003056!3.35e-20!61;UBERON:0000153!2.17e-19!129;UBERON:0007811!2.17e-19!129;UBERON:0004733!3.90e-19!12;UBERON:0002028!3.90e-19!12;UBERON:0007277!3.90e-19!12;UBERON:0004732!1.26e-17!13;UBERON:0001869!1.49e-17!32;UBERON:0002020!1.36e-16!34;UBERON:0003528!1.36e-16!34;UBERON:0003076!3.29e-15!15;UBERON:0003057!3.29e-15!15;UBERON:0001950!3.32e-14!20;UBERON:0004121!9.92e-14!169;UBERON:0000924!2.56e-13!173;UBERON:0006601!2.56e-13!173;UBERON:0002298!4.99e-13!8;UBERON:0000025!5.38e-13!194;UBERON:0002619!6.73e-13!22;UBERON:0002680!4.45e-12!9;UBERON:0001895!4.45e-12!9;UBERON:0010092!4.45e-12!9;UBERON:0002420!1.13e-11!9;UBERON:0007245!1.13e-11!9;UBERON:0010009!1.13e-11!9;UBERON:0010011!1.13e-11!9;UBERON:0000454!1.13e-11!9;UBERON:0000956!2.58e-11!25;UBERON:0000203!2.58e-11!25;UBERON:0004111!9.65e-11!241;UBERON:0002037!9.78e-11!6;UBERON:0006215!9.78e-11!6;UBERON:0000477!2.00e-10!286;UBERON:0002106!3.51e-10!3;UBERON:0004854!3.51e-10!3;UBERON:0009034!3.51e-10!3;UBERON:0002095!3.51e-10!3;UBERON:0004782!3.51e-10!3;UBERON:0003281!3.51e-10!3;UBERON:0009664!3.51e-10!3;UBERON:0002296!3.51e-10!3;UBERON:0005602!3.51e-10!3;UBERON:0001179!3.51e-10!3;UBERON:0006293!3.51e-10!3;UBERON:0006947!8.52e-10!3;UBERON:0004054!8.52e-10!3;UBERON:0001896!2.41e-09!3;UBERON:0005290!2.41e-09!3;UBERON:0010096!2.41e-09!3;UBERON:0000483!3.55e-09!309;UBERON:0000119!4.85e-09!312;UBERON:0000064!8.37e-09!219;UBERON:0009663!8.84e-09!7;UBERON:0000475!9.48e-09!365;UBERON:0001000!3.80e-08!1;UBERON:0005352!3.80e-08!1;UBERON:0002038!5.33e-08!1;UBERON:0009661!5.33e-08!1;UBERON:0001301!8.51e-08!1;UBERON:0002581!1.04e-07!1;UBERON:0002022!1.26e-07!1;UBERON:0005904!1.49e-07!4;UBERON:0002902!1.64e-07!1;UBERON:0009899!1.64e-07!1;UBERON:0007190!1.75e-07!1;UBERON:0002336!1.87e-07!1;UBERON:0001018!1.87e-07!1;UBERON:0002473!1.87e-07!1;UBERON:0005340!1.87e-07!1;UBERON:0002316!1.87e-07!1;UBERON:0003544!1.87e-07!1;UBERON:0001020!1.87e-07!1;UBERON:0005970!1.87e-07!1;UBERON:0002437!1.87e-07!1;UBERON:0001882!1.99e-07!1;UBERON:0005403!1.99e-07!1;UBERON:0002308!6.28e-07!9;UBERON:0000125!6.28e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;7.79e-88;3!UBERON:0004177;2.51e-53;5!UBERON:0005057;2.51e-53;5!UBERON:0002075;8.72e-16;18!UBERON:0002037;2.59e-12;6!UBERON:0000077;6.40e-11;27!UBERON:0002405;6.40e-11;27!UBERON:0002390;2.73e-09;32!UBERON:0002680;1.16e-08;9!UBERON:0001895;1.16e-08;9!UBERON:0004458;7.77e-07;48!UBERON:0004733;8.14e-07;12!UBERON:0002028;8.14e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,9.74e-88,3;UBERON:0004854,9.74e-88,3;UBERON:0009034,9.74e-88,3;UBERON:0002095,9.74e-88,3;UBERON:0004782,9.74e-88,3;UBERON:0003281,9.74e-88,3;UBERON:0009664,9.74e-88,3;UBERON:0002296,9.74e-88,3;UBERON:0005602,9.74e-88,3;UBERON:0001179,9.74e-88,3;UBERON:0006293,9.74e-88,3;UBERON:0004177,1.80e-38,7;UBERON:0005057,1.80e-38,7;UBERON:0000945,7.68e-34,8;UBERON:0010039,7.68e-34,8;UBERON:0004457,5.14e-23,12;UBERON:0000042,5.14e-23,12;UBERON:0003887,5.14e-23,12;UBERON:0002075,9.05e-16,18;UBERON:0002037,2.45e-12,6;UBERON:0006215,2.45e-12,6;UBERON:0005409,2.77e-11,25;UBERON:0000077,3.10e-10,29;UBERON:0002680,1.12e-08,9;UBERON:0001895,1.12e-08,9;UBERON:0010092,1.12e-08,9;UBERON:0002323,7.52e-07,46;UBERON:0004733,7.92e-07,12;UBERON:0002028,7.92e-07,12;UBERON:0007277,7.92e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0.331737779793674,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0.514784993585894,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0.781078098613847,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.135939465953663,0.131545547125698,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,1.03382309777839,2.12711030312805,0,0,0,0,0,0,0.286679166302903,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0.331737779793674,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0.514784993585894,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0.781078098613847,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.135939465953663,0.131545547125698,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,1.03382309777839,2.12711030312805,0,0,0,0,0,0,0.286679166302903,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@IL34 | |short_description=p6@IL34 | ||
}} | }} |
Latest revision as of 16:26, 17 September 2015
Short description: | p6@IL34 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_IL34_5end |
Coexpression cluster: | NA |
Association with transcript: | -97bp_to_ENST00000288098, uc002ezh.1, uc002ezi.1_5end |
EntrezGene: | IL34 |
HGNC: | 28529 |
UniProt: | Q6ZMJ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spleen | 9.74e-88 | 3 |
gastrointestinal system mesentery | 9.74e-88 | 3 |
stomach region | 9.74e-88 | 3 |
mesentery | 9.74e-88 | 3 |
gastrointestinal system serosa | 9.74e-88 | 3 |
mesentery of stomach | 9.74e-88 | 3 |
gut mesentery | 9.74e-88 | 3 |
dorsal mesentery | 9.74e-88 | 3 |
dorsal mesogastrium | 9.74e-88 | 3 |
peritoneal cavity | 9.74e-88 | 3 |
spleen primordium | 9.74e-88 | 3 |
hemopoietic organ | 1.80e-38 | 7 |
immune organ | 1.80e-38 | 7 |
stomach | 7.68e-34 | 8 |
food storage organ | 7.68e-34 | 8 |
cavity lining | 5.14e-23 | 12 |
serous membrane | 5.14e-23 | 12 |
intraembryonic coelom | 5.14e-23 | 12 |
viscus | 9.05e-16 | 18 |
cerebellum | 2.45e-12 | 6 |
rhombic lip | 2.45e-12 | 6 |
gastrointestinal system | 2.77e-11 | 25 |
mixed endoderm/mesoderm-derived structure | 3.10e-10 | 29 |
regional part of metencephalon | 1.12e-08 | 9 |
metencephalon | 1.12e-08 | 9 |
future metencephalon | 1.12e-08 | 9 |
body cavity | 7.52e-07 | 46 |
segmental subdivision of hindbrain | 7.92e-07 | 12 |
hindbrain | 7.92e-07 | 12 |
presumptive hindbrain | 7.92e-07 | 12 |