FFCP PHASE1:Hg19::chr5:32711680..32711686,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4883 | |EntrezGene=4883 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7945 | |HGNC=7945 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=15bp_to_uc003jhu.2,uc003jhv.2_5end | |association_with_transcript=15bp_to_uc003jhu.2,uc003jhv.2_5end | ||
|cluster_id=chr5:32711680..32711686,+ | |||
|coexpression_cluster_id=C1959 | |coexpression_cluster_id=C1959 | ||
|description=CAGE_peak_5_at_NPR3_5end | |description=CAGE_peak_5_at_NPR3_5end | ||
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|ontology_enrichment_celltype=CL:0000055!1.77e-14!180;CL:0000680!1.41e-11!57;CL:0000056!1.41e-11!57;CL:0000355!1.41e-11!57;CL:0000187!5.90e-10!54;CL:0000183!1.04e-08!59;CL:0000057!1.45e-08!75;CL:0000393!2.36e-08!60;CL:0000211!2.36e-08!60;CL:0000192!9.56e-08!42;CL:0000514!9.56e-08!42;CL:0002620!1.44e-07!23;CL:0000136!2.02e-07!15;CL:0000359!6.95e-07!32 | |ontology_enrichment_celltype=CL:0000055!1.77e-14!180;CL:0000680!1.41e-11!57;CL:0000056!1.41e-11!57;CL:0000355!1.41e-11!57;CL:0000187!5.90e-10!54;CL:0000183!1.04e-08!59;CL:0000057!1.45e-08!75;CL:0000393!2.36e-08!60;CL:0000211!2.36e-08!60;CL:0000192!9.56e-08!42;CL:0000514!9.56e-08!42;CL:0002620!1.44e-07!23;CL:0000136!2.02e-07!15;CL:0000359!6.95e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000136;5.63e-10;13!CL:0002620;7.86e-10;23!CL:0000153;9.79e-07;9!CL:0000447;9.79e-07;9 | |ontology_enrichment_celltype_v019=CL:0000136;5.63e-10;13!CL:0002620;7.86e-10;23!CL:0000153;9.79e-07;9!CL:0000447;9.79e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,8.22e-12,15;CL:0000057,1.71e-11,76;CL:0002620,6.82e-10,23;CL:0000680,1.56e-07,58;CL:0000056,1.56e-07,58;CL:0000355,1.56e-07,58;CL:0000153,9.68e-07,9;CL:0000447,9.68e-07,9 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;4.86e-07;5!DOID:450;4.86e-07;5!DOID:66;4.86e-07;5!DOID:423;4.86e-07;5!DOID:0080000;4.86e-07;5!DOID:11722;4.86e-07;5 | |ontology_enrichment_disease_v019=DOID:17;4.86e-07;5!DOID:450;4.86e-07;5!DOID:66;4.86e-07;5!DOID:423;4.86e-07;5!DOID:0080000;4.86e-07;5!DOID:11722;4.86e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,4.32e-07,5;DOID:450,4.32e-07,5;DOID:66,4.32e-07,5;DOID:423,4.32e-07,5;DOID:0080000,4.32e-07,5;DOID:11722,4.32e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001134!1.58e-11!61;UBERON:0002036!1.58e-11!61;UBERON:0003082!1.58e-11!61;UBERON:0002385!2.78e-11!63;UBERON:0001015!2.78e-11!63;UBERON:0000383!2.78e-11!63;UBERON:0000914!2.02e-10!83;UBERON:0002329!2.02e-10!83;UBERON:0003077!2.02e-10!83;UBERON:0003059!2.02e-10!83;UBERON:0007282!2.02e-10!83;UBERON:0009618!2.02e-10!83;UBERON:0007285!2.02e-10!83;UBERON:0004290!7.02e-10!70;UBERON:0002100!1.12e-08!216;UBERON:0000486!2.69e-08!82;UBERON:0003104!1.20e-07!238;UBERON:0009142!1.20e-07!238;UBERON:0000475!3.10e-07!365;UBERON:0000481!4.05e-07!347 | |ontology_enrichment_uberon=UBERON:0001134!1.58e-11!61;UBERON:0002036!1.58e-11!61;UBERON:0003082!1.58e-11!61;UBERON:0002385!2.78e-11!63;UBERON:0001015!2.78e-11!63;UBERON:0000383!2.78e-11!63;UBERON:0000914!2.02e-10!83;UBERON:0002329!2.02e-10!83;UBERON:0003077!2.02e-10!83;UBERON:0003059!2.02e-10!83;UBERON:0007282!2.02e-10!83;UBERON:0009618!2.02e-10!83;UBERON:0007285!2.02e-10!83;UBERON:0004290!7.02e-10!70;UBERON:0002100!1.12e-08!216;UBERON:0000486!2.69e-08!82;UBERON:0003104!1.20e-07!238;UBERON:0009142!1.20e-07!238;UBERON:0000475!3.10e-07!365;UBERON:0000481!4.05e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0004905;2.73e-10;8!UBERON:0000982;2.73e-10;8!UBERON:0004770;2.73e-10;8!UBERON:0004457;2.56e-09;9!UBERON:0000042;2.56e-09;9!UBERON:0011135;6.42e-09;5!UBERON:0002216;6.42e-09;5!UBERON:0011134;6.42e-09;5!UBERON:0002209;6.42e-09;5!UBERON:0002213;6.42e-09;5!UBERON:0007844;6.42e-09;5!UBERON:0011138;6.42e-09;5!UBERON:0001130;6.42e-09;5!UBERON:0001066;6.42e-09;5!UBERON:0001468;6.42e-09;5!UBERON:0003688;1.09e-07;6!UBERON:0002358;1.09e-07;6!UBERON:0003684;1.09e-07;6!UBERON:0001178;1.09e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0004905;2.73e-10;8!UBERON:0000982;2.73e-10;8!UBERON:0004770;2.73e-10;8!UBERON:0004457;2.56e-09;9!UBERON:0000042;2.56e-09;9!UBERON:0011135;6.42e-09;5!UBERON:0002216;6.42e-09;5!UBERON:0011134;6.42e-09;5!UBERON:0002209;6.42e-09;5!UBERON:0002213;6.42e-09;5!UBERON:0007844;6.42e-09;5!UBERON:0011138;6.42e-09;5!UBERON:0001130;6.42e-09;5!UBERON:0001066;6.42e-09;5!UBERON:0001468;6.42e-09;5!UBERON:0003688;1.09e-07;6!UBERON:0002358;1.09e-07;6!UBERON:0003684;1.09e-07;6!UBERON:0001178;1.09e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,3.35e-10,8;UBERON:0000982,3.35e-10,8;UBERON:0004770,3.35e-10,8;UBERON:0011135,7.69e-09,5;UBERON:0002216,7.69e-09,5;UBERON:0011134,7.69e-09,5;UBERON:0002209,7.69e-09,5;UBERON:0002213,7.69e-09,5;UBERON:0005856,7.69e-09,5;UBERON:0005866,7.69e-09,5;UBERON:0005863,7.69e-09,5;UBERON:0007844,7.69e-09,5;UBERON:0011138,7.69e-09,5;UBERON:0001130,7.69e-09,5;UBERON:0001066,7.69e-09,5;UBERON:0001468,7.69e-09,5;UBERON:0004457,1.96e-08,12;UBERON:0000042,1.96e-08,12;UBERON:0003688,1.08e-07,6;UBERON:0002358,1.08e-07,6;UBERON:0003684,1.08e-07,6;UBERON:0001178,1.08e-07,6;UBERON:0001134,1.50e-07,62;UBERON:0002036,1.50e-07,62;UBERON:0003082,1.50e-07,62;UBERON:0004797,3.34e-07,7;UBERON:0002385,3.87e-07,64;UBERON:0001015,3.87e-07,64;UBERON:0000383,3.87e-07,64 | |||
|phase1_expression=16.3510541343501,21.8382534368803,10.2896714990059,7.00513088471913,4.91657203870017,12.2127393374052,0,0,0,0,0,0,0,8.91117741312336,8.61633176892581,0,0,0,0,0,0.408001382488506,0,0,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,1.17440175733939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30152611318355,4.3372698286148,16.5441510509844,6.80778639115871,0,0.486634870302636,0.0945348171640679,0.886917589850256,0.43917392846563,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,2.48485975847659,2.78587125662075,1.05927344650575,9.46560848471085,2.4826786753885,3.92474320099615,0,5.42668606517752,0,0,0.163461903113459,0.454072282934794,0,0,0,0,0.448346041655403,0,0.161872944368132,0.140450806702248,0,0,0,0,1.23633464639278,0,0,0,0,0.277064115484183,0,7.35570709917647,1.50238058906597,0.113432183160021,1.79389635688862,1.06778694409284,2.96704661623387,2.40072876867522,1.13357782162283,1.28820270022815,2.79175284497385,16.3713042274028,6.72315335612271,0.504867548488229,2.30124746605748,2.10139873864455,4.9701342952326,2.61955455391865,1.3564847384839,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,6.50115099244771,8.66255378003503,0.591534000199219,0.168584690078102,0.241011029883482,0.882351781859152,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,2.34817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.4400297149257,0,0,0.845302752556,0,0,0,1.41849132023278,0.266422179016099,18.444161181901,0.542621605391443,0,0.325736184293735,13.8602860009593,0.791951872933429,0,0,0,0,0,0,3.35474797688216,0,0,4.48822050669496,3.28762116080613,2.14873155887875,0,0,0,0,0,1.30139853857622,0,0.335032530668698,0,0,0,0,3.92612773501248,2.00068208423871,4.34024037919577,6.23912584592421,15.8801800029474,11.3545738824433,8.43418187947535,3.31040709700491,0,0,0.664225598535437,0,0,0.391602314925481,0,0,0,0.106727557803444,0,0,0.30239029332968,6.20269519546942,9.66810431714793,5.05188169979532,4.10045277618243,6.65219423786715,0,1.48418066444991,0,0,0.410635780069046,0.519254429183621,0,0,0,0,0.459257792658427,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.386682873168488,0.616194468458578,0.767518373630648,0.413509717453592,2.90034661144339,4.64053420525531,0.340906509664404,0.623224249527161,0,0,0,0,0,16.6850543820239,2.7881490806424,2.46426864140871,0.532306030317022,0.869932992075073,0.55597265731176,0.286249773483982,2.97726695487734,4.42931194606216,0.571890581771475,1.27948895655667,0,7.00047145437061,0.78494864019923,1.43897966066652,0.54907405947211,0,0.202182481573316,4.75530963519025,0.842516912477962,0,2.92456187557541,0,0,2.40389234321312,1.13008116620243,12.1300375580147,5.97095077717098,1.31535265576129,0.578775534266688,1.31178950409327,0,0.30982349809975,0.563391205064483,0,0,0,0,6.12212142363226,5.59801318031833,0,0,0,0.670302275535787,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,3.59845090630601,0,1.40398589056729,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0.270455678475983,2.33150377598474,0,0,2.05111450980652,0,0,0,0.23874448473769,0,0,0,0,0,0,0.844501632511974,0.19924798825107,0,0,0,0,0.622079175323615,0,1.07412704805365,0,0.197286811273867,0,6.66821940867821,0,0,1.99613798001194,0.260427761085233,0.0874599999961957,0,0.341380344856499,1.01701460117107,1.41832609060762,0,0,0,0,0,0,0,0,0,0.653630781113941,0.557694977114413,0.0769502585037971,0,0,0,0,2.23300811812344,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,1.22206028986725,0,0,0,0.067401132980677,4.01288823649394,0,0,0,0,0.394584402849391,0,0.91821828489147,0.568679216656392,0.150323419414493,0,0,0,0,0,0,0,0.520679215005393,0,0,0.52418000472609,0,0.483781656445426,0.0730893170861856,0.410577285266046,0.193978032976839,2.55942767405351,0,0,0,0,0,0.400794101257669,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,1.11712960508902,1.14580212005842,0.717873024576814,0.399358000997982,0,0.446342914883745,0.335917362433631,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,1.97014268247995,0.209818352539992,0.105600336519406,0.537862017998534,0.383830394638891,0,0.662091970365432,0,0.542999601753713,0,0,0,0,0,0,0.293104467356165,2.65013777824443,0,0,0.513260513652988,0,2.24253566392159,2.20086027139532,0.414239055347196,0.496166021811951,0,0,0,3.80812462358632,2.7575888342497,3.67614692116154,0.655745261419609,0,0,0,0.1251909307065,0,0,0.0620964029413835,5.53394539744923,0.249960815924213,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0.378806010550178,4.0250864280412,3.55924488638614,0.228840068396924,0,1.70980920641059,0.591420599958536,0,0,0.155262956876259,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| ||
|short_description=p5@NPR3 | |short_description=p5@NPR3 | ||
}} | }} |
Latest revision as of 16:16, 17 September 2015
Short description: | p5@NPR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NPR3_5end |
Coexpression cluster: | C1959_Smooth_Fibroblast_Chondrocyte_Mesenchymal_normal_Olfactory_medulloblastoma |
Association with transcript: | 15bp_to_uc003jhu.2, uc003jhv.2_5end |
EntrezGene: | NPR3 |
HGNC: | 7945 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 8.22e-12 | 15 |
fibroblast | 1.71e-11 | 76 |
skin fibroblast | 6.82e-10 | 23 |
muscle precursor cell | 1.56e-07 | 58 |
myoblast | 1.56e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.56e-07 | 58 |
GAG secreting cell | 9.68e-07 | 9 |
carbohydrate secreting cell | 9.68e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
articulation | 3.35e-10 | 8 |
skeletal joint | 3.35e-10 | 8 |
articular system | 3.35e-10 | 8 |
intervertebral cartilage | 7.69e-09 | 5 |
symphysis | 7.69e-09 | 5 |
nonsynovial joint | 7.69e-09 | 5 |
fibrous joint | 7.69e-09 | 5 |
cartilaginous joint | 7.69e-09 | 5 |
developing mesenchymal condensation | 7.69e-09 | 5 |
pre-cartilage condensation | 7.69e-09 | 5 |
cartilaginous condensation | 7.69e-09 | 5 |
cartilage element | 7.69e-09 | 5 |
post-cranial axial skeletal system | 7.69e-09 | 5 |
vertebral column | 7.69e-09 | 5 |
intervertebral disk | 7.69e-09 | 5 |
intervertebral joint | 7.69e-09 | 5 |
cavity lining | 1.96e-08 | 12 |
serous membrane | 1.96e-08 | 12 |
omentum | 1.08e-07 | 6 |
peritoneum | 1.08e-07 | 6 |
abdominal cavity | 1.08e-07 | 6 |
visceral peritoneum | 1.08e-07 | 6 |
skeletal muscle tissue | 1.50e-07 | 62 |
striated muscle tissue | 1.50e-07 | 62 |
myotome | 1.50e-07 | 62 |
blood vessel layer | 3.34e-07 | 7 |
muscle tissue | 3.87e-07 | 64 |
musculature | 3.87e-07 | 64 |
musculature of body | 3.87e-07 | 64 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.32e-07 | 5 |
myotonic disease | 4.32e-07 | 5 |
muscle tissue disease | 4.32e-07 | 5 |
myopathy | 4.32e-07 | 5 |
muscular disease | 4.32e-07 | 5 |
myotonic dystrophy | 4.32e-07 | 5 |