FFCP PHASE1:Hg19::chr17:7461732..7461744,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8741 | |EntrezGene=8741 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11928 | |HGNC=11928 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-48bp_to_ENST00000349228_5end | |association_with_transcript=-48bp_to_ENST00000349228_5end | ||
|cluster_id=chr17:7461732..7461744,+ | |||
|description=CAGE_peak_16_at_TNFSF13_5end | |description=CAGE_peak_16_at_TNFSF13_5end | ||
|id=chr17:7461732..7461744,+ | |id=chr17:7461732..7461744,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008425;9.55e-12;1!UBERON:0005754;2.67e-11;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.62e-24!115;UBERON:0001049!3.34e-17!57;UBERON:0005068!3.34e-17!57;UBERON:0006241!3.34e-17!57;UBERON:0007135!3.34e-17!57;UBERON:0002616!8.78e-14!59;UBERON:0003075!2.57e-12!86;UBERON:0007284!2.57e-12!86;UBERON:0004111!5.26e-12!241;UBERON:0002346!7.79e-12!90;UBERON:0000025!2.69e-11!194;UBERON:0003080!3.80e-11!42;UBERON:0001017!4.00e-11!82;UBERON:0005743!6.47e-11!86;UBERON:0000955!8.23e-11!69;UBERON:0006238!8.23e-11!69;UBERON:0000477!1.09e-10!286;UBERON:0002780!2.09e-10!41;UBERON:0001890!2.09e-10!41;UBERON:0006240!2.09e-10!41;UBERON:0002020!5.20e-10!34;UBERON:0003528!5.20e-10!34;UBERON:0001893!6.07e-10!34;UBERON:0002791!2.62e-09!33;UBERON:0001869!6.58e-09!32;UBERON:0000073!9.78e-09!94;UBERON:0001016!9.78e-09!94;UBERON:0002298!2.42e-08!8;UBERON:0002619!5.40e-08!22;UBERON:0003076!1.15e-07!15;UBERON:0003057!1.15e-07!15;UBERON:0003056!3.24e-07!61;UBERON:0000153!6.68e-07!129;UBERON:0007811!6.68e-07!129;UBERON:0000483!6.93e-07!309;UBERON:0000119!7.10e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;7.76e-21;2!UBERON:0002757;7.76e-21;2!UBERON:0010134;7.76e-21;2!UBERON:0005408;7.76e-21;2!UBERON:0001899;7.76e-21;2!UBERON:0000998;2.67e-11;1!UBERON:0006868;2.67e-11;1!UBERON:0003296;6.63e-11;4!UBERON:0010133;6.63e-11;4!UBERON:0002784;6.63e-11;4!UBERON:0002021;6.69e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.59e-20,2;UBERON:0002757,2.59e-20,2;UBERON:0010134,2.59e-20,2;UBERON:0005408,2.59e-20,2;UBERON:0001899,2.59e-20,2;UBERON:0000998,1.18e-11,1;UBERON:0006868,1.18e-11,1;UBERON:0003296,1.21e-10,4;UBERON:0010133,1.21e-10,4;UBERON:0002784,1.21e-10,4;UBERON:0002021,4.68e-09,5;UBERON:0000073,2.54e-08,53;UBERON:0002616,2.54e-08,53;UBERON:0002780,4.00e-08,41;UBERON:0001890,4.00e-08,41;UBERON:0003080,4.00e-08,41;UBERON:0006240,4.00e-08,41;UBERON:0001049,7.58e-08,56;UBERON:0005068,7.58e-08,56;UBERON:0006241,7.58e-08,56;UBERON:0007135,7.58e-08,56;UBERON:0007023,2.72e-07,114;UBERON:0003056,3.75e-07,61 | |||
|phase1_expression=0.181678379270557,0,0,1.0007329835313,0.446961094427288,0,0,1.26343974685366,0.261185628199839,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0.209658645508376,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.579386075843295,0,0,0.0945348171640679,0.221729397462564,0,0.327447688744282,0,0,0.649094787309367,0.348259474598534,1.06366368415092,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0.825354125820202,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,1.53316637465883,0,0.183201743930407,0,0,0,0,0.25326102332916,0,0,0.354668382198357,0,0,0,0.311211035399766,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.206105058476878,0,0.18611685633159,0.168776332241266,0.194874010322397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0.857479297891735,0,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.199945982364114,1.2162378064119,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831883446123229,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0.321707842287215,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0.10115778085555,0,0,0,0.308033580176089,0.532306030317022,0.869932992075073,0,0,0,0.316379424718726,0,0,0,0.318203247925937,0,0.179872457583315,0,0,0.404364963146632,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.192444225451024,0,0,0.188287601553558,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0.846694330895531,0,0,0,0,2.50634477090067,0.338583555603207,0.321176150207399,0.201799707191048,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.834912883456661,0,0,2.62379999988587,0.724999575434793,0.227586896570999,0.254253650292766,0,0,0,0,0,0.723578631752448,0,0.884634079449797,0.591095237907095,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.317873157960757,0,0,0,0,0,0.176915129006678,0,0,0,0,0.337005664903385,0,0,0,0.782658475728359,0,0.394584402849391,0,0,0.379119477770928,0,0,0,0,0,0,0.284609546029793,0,0.347119476670262,0.0979923974143777,0,0.17472666824203,0,0.0967563312890851,0.219267951258557,0,0.290967049465258,0,0.451961481561065,0,0,0.316553979779393,2.34661659281764,0.0801588202515337,0,0,0.144090417154106,0,0.171594997861965,0,0,0,0,0,0,0,1.20084057741958,0.410716136675979,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0.164831716762333,0.26961417541674,0,0,0.795229689809303,0.272406812223151,0,0,0,0.2249738915515,0,0.850493793212345,0,0.236417121897595,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0.339936274560377,0,0,0.387848869084652,0.39669780522807,0,0.704815022316672,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,0,0,0.244052529803926,0.3755727921195,1.14681839138014,0.332787154610557,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0.228840068396924,0,0.15543720058278,0,0.159296767163702,0,0.155262956876259,0,0,0,0.150257608997218,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0.414775308455192,0,0,0,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,1.41696576325585,1.43670473151436,0.205116364240755,0,0.691572524642179,0.807378228159255,0,0.0981477185010256,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,1.44680757550829,0.507326481551255,0,0,0.496211178389294,0.175871244359621,0.894336993477167,1.07140367175657,1.00885116665647,0,0.682986574053893,0.177404740325278,0,0.342976018874837,0.40781839786099,0.328863867814245,0.118193840883968,0.111231401892069,0.470958557103084,0,0,0,0,0,1.1436247068265,0,0,0,0,0,0.17071847709395,0,1.29068207646083,0,0,1.69354820076372,0,0,0,0,0.098150233615243,0.121917924982269,0,0,0,0,0,0.198950775161368,0,0,0,0,0.308696632431779,0.218559560503957,0,0.490296643507811,0,0.392616934229891,0.594092800654172,0.4226557275834,0.169927114687817,0,0.257831551894309,0,0,0,0.240724100067505,0,0.458729283404541,0.143339583151451,0,0.339957450954573,0,0.5290268405154,0,0.462175628631418,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.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| ||
|short_description=p16@TNFSF13 | |short_description=p16@TNFSF13 | ||
}} | }} |
Latest revision as of 16:11, 17 September 2015
Short description: | p16@TNFSF13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_TNFSF13_5end |
Coexpression cluster: | NA |
Association with transcript: | -48bp_to_ENST00000349228_5end |
EntrezGene: | TNFSF13 |
HGNC: | 11928 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 2.59e-20 | 2 |
regional part of epithalamus | 2.59e-20 | 2 |
secretory circumventricular organ | 2.59e-20 | 2 |
circumventricular organ | 2.59e-20 | 2 |
epithalamus | 2.59e-20 | 2 |
seminal vesicle | 1.18e-11 | 1 |
seminal fluid secreting gland | 1.18e-11 | 1 |
gland of diencephalon | 1.21e-10 | 4 |
neuroendocrine gland | 1.21e-10 | 4 |
regional part of diencephalon | 1.21e-10 | 4 |
occipital lobe | 4.68e-09 | 5 |
regional part of nervous system | 2.54e-08 | 53 |
regional part of brain | 2.54e-08 | 53 |
regional part of forebrain | 4.00e-08 | 41 |
forebrain | 4.00e-08 | 41 |
anterior neural tube | 4.00e-08 | 41 |
future forebrain | 4.00e-08 | 41 |
neural tube | 7.58e-08 | 56 |
neural rod | 7.58e-08 | 56 |
future spinal cord | 7.58e-08 | 56 |
neural keel | 7.58e-08 | 56 |
adult organism | 2.72e-07 | 114 |
pre-chordal neural plate | 3.75e-07 | 61 |