FFCP PHASE1:Hg19::chr1:33351572..33351602,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:33351572..33351602,+ to FFCP PHASE1:Hg19::chr1:33351572..33351602,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3208 | |EntrezGene=3208 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5144 | |HGNC=5144 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000470166_5end | |||
|cluster_id=chr1:33351572..33351602,+ | |||
|coexpression_cluster_id=C85 | |||
|description=CAGE_peak_4_at_HPCA_5end | |||
|id=chr1:33351572..33351602,+ | |||
|ontology_enrichment_celltype=CL:0000242!1.74e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;9.90e-11;2!CL:0000242;9.90e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.01e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.57e-10;2!UBERON:0006601;3.56e-09;82!UBERON:0006238;2.40e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.06e-67!57;UBERON:0005068!1.06e-67!57;UBERON:0006241!1.06e-67!57;UBERON:0007135!1.06e-67!57;UBERON:0001017!3.41e-67!82;UBERON:0005743!1.69e-66!86;UBERON:0001893!1.20e-64!34;UBERON:0001869!1.97e-64!32;UBERON:0002020!2.11e-64!34;UBERON:0003528!2.11e-64!34;UBERON:0000955!7.39e-64!69;UBERON:0006238!7.39e-64!69;UBERON:0000073!2.81e-62!94;UBERON:0001016!2.81e-62!94;UBERON:0002791!6.55e-62!33;UBERON:0002780!1.04e-60!41;UBERON:0001890!1.04e-60!41;UBERON:0006240!1.04e-60!41;UBERON:0003080!4.28e-59!42;UBERON:0002616!4.65e-58!59;UBERON:0002619!6.05e-52!22;UBERON:0003075!1.95e-49!86;UBERON:0007284!1.95e-49!86;UBERON:0002346!1.99e-49!90;UBERON:0001950!1.13e-46!20;UBERON:0000956!2.82e-45!25;UBERON:0000203!2.82e-45!25;UBERON:0003056!4.22e-44!61;UBERON:0000033!4.06e-35!123;UBERON:0000153!1.04e-34!129;UBERON:0007811!1.04e-34!129;UBERON:0000924!1.02e-33!173;UBERON:0006601!1.02e-33!173;UBERON:0004121!4.20e-33!169;UBERON:0007023!2.86e-32!115;UBERON:0002308!2.81e-20!9;UBERON:0000125!2.81e-20!9;UBERON:0000200!3.21e-17!6;UBERON:0002420!7.83e-16!9;UBERON:0007245!7.83e-16!9;UBERON:0010009!7.83e-16!9;UBERON:0010011!7.83e-16!9;UBERON:0000454!7.83e-16!9;UBERON:0009663!1.40e-15!7;UBERON:0002021!7.85e-15!5;UBERON:0001872!8.08e-15!5;UBERON:0000025!4.28e-14!194;UBERON:0000369!4.50e-13!4;UBERON:0002435!4.50e-13!4;UBERON:0000204!4.50e-13!4;UBERON:0010082!4.50e-13!4;UBERON:0001871!8.44e-13!7;UBERON:0003076!1.26e-10!15;UBERON:0003057!1.26e-10!15;UBERON:0000064!1.31e-10!219;UBERON:0005383!3.91e-10!3;UBERON:0005382!3.91e-10!3;UBERON:0000349!8.74e-10!5;UBERON:0000483!1.07e-09!309;UBERON:0000475!1.41e-09!365;UBERON:0000119!1.68e-09!312;UBERON:0004111!1.70e-09!241;UBERON:0002771!4.33e-09!3;UBERON:0000988!1.04e-08!3;UBERON:0000477!9.74e-08!286;UBERON:0004733!1.06e-07!12;UBERON:0002028!1.06e-07!12;UBERON:0007277!1.06e-07!12;UBERON:0002680!1.80e-07!9;UBERON:0001895!1.80e-07!9;UBERON:0010092!1.80e-07!9;UBERON:0001870!3.23e-07!2;UBERON:0001873!3.44e-07!2;UBERON:0010122!3.44e-07!2;UBERON:0004732!4.64e-07!13;UBERON:0001875!6.30e-07!2;UBERON:0006514!6.30e-07!2;UBERON:0001954!6.89e-07!2;UBERON:0003022!6.89e-07!2;UBERON:0002421!6.89e-07!2;UBERON:0002600!6.89e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.81e-51;32!UBERON:0002791;4.98e-48;32!UBERON:0001893;1.87e-45;34!UBERON:0003528;8.20e-43;34!UBERON:0002020;8.20e-43;34!UBERON:0002619;1.69e-41;22!UBERON:0000956;2.52e-36;25!UBERON:0000203;2.52e-36;25!UBERON:0002780;5.16e-36;41!UBERON:0001890;5.16e-36;41!UBERON:0001950;2.47e-34;20!UBERON:0000955;8.52e-23;68!UBERON:0001017;1.88e-22;75!UBERON:0000073;8.22e-20;53!UBERON:0002616;8.22e-20;53!UBERON:0000369;2.46e-19;4!UBERON:0002435;2.46e-19;4!UBERON:0000204;2.46e-19;4!UBERON:0001016;2.78e-17;83!UBERON:0009663;6.78e-17;7!UBERON:0005383;7.82e-15;3!UBERON:0005382;7.82e-15;3!UBERON:0002021;8.45e-15;5!UBERON:0002420;4.35e-13;9!UBERON:0000125;4.35e-13;9!UBERON:0007245;4.35e-13;9!UBERON:0002308;4.35e-13;9!UBERON:0010009;4.35e-13;9!UBERON:0010011;4.35e-13;9!UBERON:0000454;4.35e-13;9!UBERON:0000200;3.20e-12;6!UBERON:0001873;2.57e-10;2!UBERON:0001954;7.01e-10;2!UBERON:0003022;7.01e-10;2!UBERON:0002421;7.01e-10;2!UBERON:0002600;7.01e-10;2!UBERON:0001872;7.82e-09;5!UBERON:0000349;7.82e-09;5!UBERON:0011216;3.15e-07;132!UBERON:0001870;4.40e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,4.67e-57,32;UBERON:0001893,1.62e-53,34;UBERON:0002791,1.47e-51,32;UBERON:0002780,1.86e-48,41;UBERON:0001890,1.86e-48,41;UBERON:0003080,1.86e-48,41;UBERON:0006240,1.86e-48,41;UBERON:0003528,2.40e-48,34;UBERON:0002020,2.40e-48,34;UBERON:0002619,1.07e-41,22;UBERON:0001017,6.04e-41,81;UBERON:0000955,2.15e-39,68;UBERON:0006238,2.15e-39,68;UBERON:0001016,2.69e-39,89;UBERON:0001049,9.63e-38,56;UBERON:0005068,9.63e-38,56;UBERON:0006241,9.63e-38,56;UBERON:0007135,9.63e-38,56;UBERON:0000073,1.51e-36,53;UBERON:0002616,1.51e-36,53;UBERON:0000956,1.68e-36,25;UBERON:0000203,1.68e-36,25;UBERON:0001950,1.42e-34,20;UBERON:0003056,1.76e-34,61;UBERON:0002346,1.07e-27,86;UBERON:0003075,8.71e-27,82;UBERON:0007284,8.71e-27,82;UBERON:0010371,3.88e-24,104;UBERON:0004121,2.40e-22,171;UBERON:0000924,2.40e-22,171;UBERON:0006601,2.40e-22,171;UBERON:0000369,2.40e-19,4;UBERON:0002435,2.40e-19,4;UBERON:0000204,2.40e-19,4;UBERON:0010082,2.40e-19,4;UBERON:0009663,7.14e-17,7;UBERON:0010314,4.20e-16,132;UBERON:0011216,1.87e-15,223;UBERON:0002021,7.58e-15,5;UBERON:0005383,8.40e-15,3;UBERON:0005382,8.40e-15,3;UBERON:0007023,1.78e-14,114;UBERON:0002420,4.53e-13,9;UBERON:0000125,4.53e-13,9;UBERON:0007245,4.53e-13,9;UBERON:0002308,4.53e-13,9;UBERON:0010009,4.53e-13,9;UBERON:0010011,4.53e-13,9;UBERON:0000454,4.53e-13,9;UBERON:0000200,2.56e-12,6;UBERON:0001873,2.90e-10,2;UBERON:0010122,2.90e-10,2;UBERON:0001954,8.43e-10,2;UBERON:0003022,8.43e-10,2;UBERON:0002421,8.43e-10,2;UBERON:0002600,8.43e-10,2;UBERON:0001872,5.79e-09,5;UBERON:0000349,8.27e-09,5;UBERON:0000025,1.87e-08,192;UBERON:0001870,3.83e-07,3 | |||
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| ||
|short_description=p4@HPCA | |||
}} | }} |
Latest revision as of 16:06, 17 September 2015
Short description: | p4@HPCA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HPCA_5end |
Coexpression cluster: | C85_neuroblastoma_carcinoid_retinoblastoma_small_pineal_rhabdomyosarcoma_medulloblastoma |
Association with transcript: | 0bp_to_ENST00000470166_5end |
EntrezGene: | HPCA |
HGNC: | 5144 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.01e-10 | 2 |