FFCP PHASE1:Hg19::chr1:1564361..1564381,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=142678 | |EntrezGene=142678 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30577 | |HGNC=30577 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-104bp_to_ENST00000511910,uc001ago.2_5end | |association_with_transcript=-104bp_to_ENST00000511910,uc001ago.2_5end | ||
|cluster_id=chr1:1564361..1564381,+ | |||
|coexpression_cluster_id=C3880 | |||
|description=CAGE_peak_4_at_MIB2_5end | |description=CAGE_peak_4_at_MIB2_5end | ||
|id=chr1:1564361..1564381,+ | |id=chr1:1564361..1564381,+ | ||
|ontology_enrichment_celltype=CL:0000791!7.73e-16!18;CL:0000789!7.73e-16!18;CL:0002420!7.73e-16!18;CL:0002419!7.73e-16!18;CL:0000790!7.73e-16!18;CL:0000542!2.28e-14!53;CL:0000051!2.28e-14!53;CL:0000838!1.25e-13!52;CL:0000084!8.27e-13!25;CL:0000827!8.27e-13!25;CL:0002159!5.24e-12!13;CL:0000625!1.91e-10!11;CL:0002368!3.11e-08!13;CL:0000240!7.50e-08!6;CL:0000311!7.50e-08!6;CL:0000079!7.50e-08!6;CL:0000237!7.50e-08!6;CL:0000036!7.50e-08!6;CL:0000357!7.50e-08!6;CL:0000114!7.50e-08!6;CL:0000362!1.60e-07!8;CL:0002077!4.15e-07!33;CL:0000312!8.24e-07!5 | |ontology_enrichment_celltype=CL:0000791!7.73e-16!18;CL:0000789!7.73e-16!18;CL:0002420!7.73e-16!18;CL:0002419!7.73e-16!18;CL:0000790!7.73e-16!18;CL:0000542!2.28e-14!53;CL:0000051!2.28e-14!53;CL:0000838!1.25e-13!52;CL:0000084!8.27e-13!25;CL:0000827!8.27e-13!25;CL:0002159!5.24e-12!13;CL:0000625!1.91e-10!11;CL:0002368!3.11e-08!13;CL:0000240!7.50e-08!6;CL:0000311!7.50e-08!6;CL:0000079!7.50e-08!6;CL:0000237!7.50e-08!6;CL:0000036!7.50e-08!6;CL:0000357!7.50e-08!6;CL:0000114!7.50e-08!6;CL:0000362!1.60e-07!8;CL:0002077!4.15e-07!33;CL:0000312!8.24e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.05e-22;18!CL:0000789;1.05e-22;18!CL:0002419;1.05e-22;18!CL:0000084;2.67e-19;25!CL:0000625;7.70e-15;11!CL:0002159;7.96e-14;14!CL:0000240;5.84e-11;6!CL:0000311;5.84e-11;6!CL:0000079;5.84e-11;6!CL:0000237;5.84e-11;6!CL:0000312;2.03e-09;5!CL:0000362;2.19e-09;9!CL:0002322;6.07e-09;5!CL:0000542;7.48e-09;53!CL:0002077;1.16e-08;34!CL:0000624;4.44e-08;6!CL:0002202;2.09e-07;9!CL:0002632;2.09e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.87e-23,18;CL:0000789,7.87e-23,18;CL:0002420,7.87e-23,18;CL:0002419,7.87e-23,18;CL:0000790,7.87e-23,18;CL:0000084,2.09e-19,25;CL:0000827,2.09e-19,25;CL:0000542,2.59e-17,53;CL:0000051,2.59e-17,53;CL:0000838,2.75e-16,52;CL:0000625,8.66e-15,11;CL:0002159,8.53e-14,14;CL:0000240,6.22e-11,6;CL:0000311,6.22e-11,6;CL:0000079,6.22e-11,6;CL:0000237,6.22e-11,6;CL:0000036,6.22e-11,6;CL:0000357,6.22e-11,6;CL:0000114,6.22e-11,6;CL:0000312,2.18e-09,5;CL:0002077,2.23e-09,34;CL:0000362,2.32e-09,9;CL:0002322,7.73e-09,5;CL:0000624,3.10e-08,6;CL:0002202,2.10e-07,9;CL:0002632,2.10e-07,9;CL:0000738,2.36e-07,136;CL:0002076,7.75e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000790;1.05e-22;18!CL:0000357;5.84e-11;6!CL:0000114;5.84e-11;6!CL:0000051;7.48e-09;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.09e-07!14;UBERON:0000158!3.09e-07!14 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.16e-09,14;UBERON:0000158,3.16e-09,14;UBERON:0000974,4.03e-07,10;UBERON:0002370,6.22e-07,4;UBERON:0005058,6.22e-07,4;UBERON:0009113,6.22e-07,4;UBERON:0003295,6.22e-07,4;UBERON:0005562,6.22e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,3.49506195408276,7.12170841216825,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.125542639594803,2.29240217243854,2.21671591514854,1.73163718890094,3.14691421479123,1.53531759238885,1.85779347979291,26.6632155098889,19.277178801808,15.5296684270051,0,0,0.587200878669695,1.66198622559563,1.20326668482085,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0.306083892370903,0,0,0.329851300186716,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0.574752439954483,0,0.954053754535364,1.1384259382189,0.587237189370939,0,1.32171328579026,1.12101712596307,0.526768169550154,1.180258620683,1.96505381374582,1.64481199199607,3.51091640320424,1.95553359980154,3.31413464014313,5.84480185223734,2.45103005147382,2.06224135232386,1.77227115666897,0.812411591295047,2.94610035369053,4.29195846947598,0.164437904603676,1.65810010671509,1.15921234294021,2.81744470007915,2.40786745280742,1.04535523804977,2.49280553934646,8.43085085924227,3.09264700934367,2.27717722817553,1.59282707162048,5.20866763085135,4.75226022224187,4.51725357233318,4.22355816809581,1.24930726552346,2.13099526839615,3.28451198768419,4.23374160771938,3.4767225451856,1.30341963494519,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.196468613246569,24.0434890273078,26.6964798804789,0,0,0,9.77811559651902,9.15191857248205,17.4585025624896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,18.752044242129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.76412986071539,3.54569956768085,3.72845974005705,12.4413180252187,9.54214331914694,6.27447291495399,3.00617059544574,6.05570042101508,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,13.4992851052609,24.7283857166763,6.43385423434437,9.72178674164561,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,4.68669169933885,0.671928512795438,3.26082723657489,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.60425719967636,4.3346767244424,2.80315847317372,4.2353201972317,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0.195801157462741,0,0,2.15714200818617,3.30855429190677,63.6567900037145,16.6435439510497,22.0744914130667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,8.03971753194641,11.7010844286574,0,0,0,0,0,0,0,0.170453254832202,0,2.14870389969272,0.576570202095319,0.127612712494584,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.3990878978086,22.7902773682168,18.5114674264248,0.188287601553558,0,0,0.443430153536676,0,1.01489521846434,0,1.13929437434833,1.66762242820452,0.822724546172388,1.29694662238543,0,3.17250070517708,0,0,0,5.38829207864584,0,0,5.42049327277996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.92419999510413,0,0,0,0,47.2714079780626,3.26661148915902,54.6746049736633,0.994147647766298,0,0,0,0,0.398495976502139,1.10513566212459,0,0,0.246169610922139,0,0,0,0,0,2.3948309234694,0,0,0.185536196323703,0,0,0,0,0,0,3.78220290828698,1.72371686620732,0,0,0,0,0,0,0,0,0,0,0.769502585037971,0,0,0,0,11.4840417503491,0,0,8.17546385565892,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,3.60554149834161,0,6.07552863969141,0,0,0,0,0,0,3.20063754411784,0,0.451961481561065,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,3.29971648463514,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,1.44677833618517,10.8656154911815,12.4632101408756,0,3.86900977278975,0.668245123238271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.320362237703084,0,0,0.496166021811951,7.70685364401983,3.16660755790329,0,0,0,0,0,0,0,0.732157589411779,0,0,0,0,0,0,0,0,0,4.21501415226193,17.9702075477423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0.132864840313363,0,0,0,0,0,0,0,0,0,11.7498786484333,4.35454082023081,0,0,0,0,0.169732529954025,0,0,0,0,0.394308725006267,0,0,0,0.0642292250964595,0,0.319267718114302,0.615349092722265,0,0.414943514785307,0.322951291263702,0,4.90738592505128,0,7.15371534234548,0,0,0,0,0,0,0,0,0,0,0.607838261565552,0,0.413373593002368,0.507326481551255,0.546974809018219,1.09651553371436,0.496211178389294,0,0,0,0,0,0.227662191351298,0.532214220975833,0,0,0,0.197318320688547,0,0,0.078493092850514,0,0,0,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2872768657529,0,0,0,0,5.34282092365053,0,0,0,0,0.439762066981716,0.301925687133347,0.308696632431779,0.874238242015829,0,0,0,0,0,0,0,1.03382309777839,0.515663103788617,0,5.35661815816973,0,0,0,0.458729283404541,0,0,0.611923411718232,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0.50141507858475,0,0.535928260312357,0,0,1.27940389140589,0.714193294391221,5.1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| 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| ||
|short_description=p4@MIB2 | |short_description=p4@MIB2 | ||
}} | }} |
Latest revision as of 16:03, 17 September 2015
Short description: | p4@MIB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MIB2_5end |
Coexpression cluster: | C3880_Placental_amniotic_Corneal_Bronchial_Keratinocyte_Tracheal_Esophageal |
Association with transcript: | -104bp_to_ENST00000511910, uc001ago.2_5end |
EntrezGene: | MIB2 |
HGNC: | 30577 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.87e-23 | 18 |
alpha-beta T cell | 7.87e-23 | 18 |
immature T cell | 7.87e-23 | 18 |
mature T cell | 7.87e-23 | 18 |
immature alpha-beta T cell | 7.87e-23 | 18 |
T cell | 2.09e-19 | 25 |
pro-T cell | 2.09e-19 | 25 |
lymphocyte | 2.59e-17 | 53 |
common lymphoid progenitor | 2.59e-17 | 53 |
lymphoid lineage restricted progenitor cell | 2.75e-16 | 52 |
CD8-positive, alpha-beta T cell | 8.66e-15 | 11 |
general ecto-epithelial cell | 8.53e-14 | 14 |
stratified squamous epithelial cell | 6.22e-11 | 6 |
keratin accumulating cell | 6.22e-11 | 6 |
stratified epithelial cell | 6.22e-11 | 6 |
keratinizing barrier epithelial cell | 6.22e-11 | 6 |
epithelial fate stem cell | 6.22e-11 | 6 |
stratified epithelial stem cell | 6.22e-11 | 6 |
surface ectodermal cell | 6.22e-11 | 6 |
keratinocyte | 2.18e-09 | 5 |
ecto-epithelial cell | 2.23e-09 | 34 |
epidermal cell | 2.32e-09 | 9 |
embryonic stem cell | 7.73e-09 | 5 |
CD4-positive, alpha-beta T cell | 3.10e-08 | 6 |
epithelial cell of tracheobronchial tree | 2.10e-07 | 9 |
epithelial cell of lower respiratory tract | 2.10e-07 | 9 |
leukocyte | 2.36e-07 | 136 |
endo-epithelial cell | 7.75e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.16e-09 | 14 |
membranous layer | 3.16e-09 | 14 |
neck | 4.03e-07 | 10 |
thymus | 6.22e-07 | 4 |
hemolymphoid system gland | 6.22e-07 | 4 |
thymic region | 6.22e-07 | 4 |
pharyngeal gland | 6.22e-07 | 4 |
thymus primordium | 6.22e-07 | 4 |