FFCP PHASE1:Hg19::chr10:23728380..23728397,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=220213 | |EntrezGene=220213 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27346 | |HGNC=27346 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VV17 | |UniProt=Q5VV17 | ||
|association_with_transcript=182bp_to_ENST00000376495,NM_001145373,uc001irr.1_5end | |association_with_transcript=182bp_to_ENST00000376495,NM_001145373,uc001irr.1_5end | ||
|cluster_id=chr10:23728380..23728397,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_1_at_OTUD1_5end | |description=CAGE_peak_1_at_OTUD1_5end | ||
|id=chr10:23728380..23728397,+ | |id=chr10:23728380..23728397,+ | ||
|ontology_enrichment_celltype=CL:0000860;8.28e-20;33!CL:0002057;8.28e-20;33!CL:0000576;4.59e-16;48!CL:0000473;5.46e-16;39!CL:0000234;5.46e-16;39!CL:0000766;2.14e-12;69 | |ontology_enrichment_celltype=CL:0000766!2.83e-27!76;CL:0000860!3.92e-27!45;CL:0002057!1.55e-26!42;CL:0002009!6.10e-26!65;CL:0002194!4.15e-25!63;CL:0000576!4.15e-25!63;CL:0000040!4.15e-25!63;CL:0000559!4.15e-25!63;CL:0000557!8.10e-25!71;CL:0000839!4.96e-23!70;CL:0000738!7.48e-21!140;CL:0002087!4.23e-18!119;CL:0002031!3.28e-17!124;CL:0000763!1.78e-09!112;CL:0000049!1.78e-09!112;CL:0000037!6.42e-09!172;CL:0000566!6.42e-09!172;CL:0002032!4.03e-08!165;CL:0000837!4.03e-08!165;CL:0000988!1.15e-07!182;CL:0002393!8.51e-07!9;CL:0002397!8.51e-07!9 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;8.28e-20;33!CL:0002057;8.28e-20;33!CL:0000576;4.59e-16;48!CL:0000473;5.46e-16;39!CL:0000234;5.46e-16;39!CL:0000766;2.14e-12;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.55e-27,42;CL:0002057,4.55e-27,42;CL:0000766,6.05e-27,72;CL:0000473,1.89e-26,48;CL:0000234,1.89e-26,48;CL:0002009,1.86e-25,61;CL:0002194,1.30e-24,59;CL:0000576,1.30e-24,59;CL:0000040,1.30e-24,59;CL:0000559,1.30e-24,59;CL:0000557,1.91e-24,67;CL:0000839,1.30e-22,66;CL:0000738,1.63e-20,136;CL:0002087,8.66e-18,115;CL:0002031,4.39e-17,120;CL:0000763,2.96e-10,108;CL:0000049,2.96e-10,108;CL:0000037,1.00e-09,168;CL:0002032,6.98e-09,161;CL:0000837,6.98e-09,161;CL:0000988,1.49e-08,177;CL:0002393,6.58e-07,9;CL:0002397,6.58e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.02e-19;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.83e-21!80;UBERON:0001474!2.36e-18!86;UBERON:0002390!1.82e-17!102;UBERON:0003061!1.82e-17!102;UBERON:0004765!2.58e-15!101;UBERON:0001434!2.58e-15!101;UBERON:0002405!4.58e-15!115;UBERON:0002193!5.37e-15!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.20e-20,76;UBERON:0001474,7.97e-18,82;UBERON:0002390,5.49e-17,98;UBERON:0003061,5.49e-17,98;UBERON:0004765,5.62e-17,90;UBERON:0002405,1.16e-14,93;UBERON:0002193,3.36e-14,108;UBERON:0001434,5.39e-14,100 | |||
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| ||
|short_description=p1@OTUD1 | |short_description=p1@OTUD1 | ||
}} | }} |
Latest revision as of 15:50, 17 September 2015
Short description: | p1@OTUD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OTUD1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 182bp_to_ENST00000376495, NM_001145373, uc001irr.1_5end |
EntrezGene: | OTUD1 |
HGNC: | 27346 |
UniProt: | Q5VV17 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.55e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.55e-27 | 42 |
myeloid leukocyte | 6.05e-27 | 72 |
defensive cell | 1.89e-26 | 48 |
phagocyte | 1.89e-26 | 48 |
macrophage dendritic cell progenitor | 1.86e-25 | 61 |
monopoietic cell | 1.30e-24 | 59 |
monocyte | 1.30e-24 | 59 |
monoblast | 1.30e-24 | 59 |
promonocyte | 1.30e-24 | 59 |
granulocyte monocyte progenitor cell | 1.91e-24 | 67 |
myeloid lineage restricted progenitor cell | 1.30e-22 | 66 |
leukocyte | 1.63e-20 | 136 |
nongranular leukocyte | 8.66e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 4.39e-17 | 120 |
myeloid cell | 2.96e-10 | 108 |
common myeloid progenitor | 2.96e-10 | 108 |
hematopoietic stem cell | 1.00e-09 | 168 |
hematopoietic oligopotent progenitor cell | 6.98e-09 | 161 |
hematopoietic multipotent progenitor cell | 6.98e-09 | 161 |
hematopoietic cell | 1.49e-08 | 177 |
intermediate monocyte | 6.58e-07 | 9 |
CD14-positive, CD16-positive monocyte | 6.58e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.20e-20 | 76 |
bone element | 7.97e-18 | 82 |
hematopoietic system | 5.49e-17 | 98 |
blood island | 5.49e-17 | 98 |
skeletal element | 5.62e-17 | 90 |
immune system | 1.16e-14 | 93 |
hemolymphoid system | 3.36e-14 | 108 |
skeletal system | 5.39e-14 | 100 |