FFCP PHASE1:Hg19::chr10:23728215..23728231,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:23728215..23728231,+ to FFCP PHASE1:Hg19::chr10:23728215..23728231,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=220213 | |EntrezGene=220213 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27346 | |HGNC=27346 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VV17 | |UniProt=Q5VV17 | ||
|association_with_transcript=17bp_to_ENST00000376495,NM_001145373,uc001irr.1_5end | |||
|cluster_id=chr10:23728215..23728231,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_5_at_OTUD1_5end | |||
|id=chr10:23728215..23728231,+ | |||
|ontology_enrichment_celltype=CL:0000860!2.66e-22!45;CL:0002057!2.93e-22!42;CL:0000766!2.20e-18!76;CL:0002009!1.96e-17!65;CL:0002194!2.24e-16!63;CL:0000576!2.24e-16!63;CL:0000040!2.24e-16!63;CL:0000559!2.24e-16!63;CL:0000557!3.61e-16!71;CL:0000839!2.03e-14!70;CL:0000738!2.18e-13!140;CL:0002087!9.98e-11!119;CL:0002031!4.55e-10!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.48e-22;33!CL:0002057;7.48e-22;33!CL:0000576;1.04e-16;48!CL:0000473;6.75e-16;39!CL:0000234;6.75e-16;39!CL:0000766;7.37e-12;69!CL:0002087;8.88e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.67e-29,42;CL:0002057,1.67e-29,42;CL:0000473,2.89e-26,48;CL:0000234,2.89e-26,48;CL:0000766,1.89e-24,72;CL:0002009,1.27e-22,61;CL:0000557,2.02e-21,67;CL:0002194,3.50e-21,59;CL:0000576,3.50e-21,59;CL:0000040,3.50e-21,59;CL:0000559,3.50e-21,59;CL:0000738,1.11e-20,136;CL:0000839,2.01e-19,66;CL:0002087,1.25e-16,115;CL:0002031,5.84e-16,120;CL:0000037,2.79e-11,168;CL:0000763,2.99e-11,108;CL:0000049,2.99e-11,108;CL:0000988,3.07e-10,177;CL:0002032,3.21e-10,161;CL:0000837,3.21e-10,161;CL:0002393,2.47e-07,9;CL:0002397,2.47e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;4.35e-21;42 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.64e-12!80;UBERON:0001474!2.30e-11!86;UBERON:0002390!1.42e-10!102;UBERON:0003061!1.42e-10!102;UBERON:0004765!3.39e-09!101;UBERON:0001434!3.39e-09!101;UBERON:0002405!4.29e-09!115;UBERON:0007023!5.08e-09!115;UBERON:0002193!5.17e-09!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.28e-18,76;UBERON:0001474,8.16e-16,82;UBERON:0002390,9.98e-15,98;UBERON:0003061,9.98e-15,98;UBERON:0002405,1.03e-13,93;UBERON:0004765,1.17e-12,90;UBERON:0001434,2.68e-12,100;UBERON:0002193,2.89e-12,108;UBERON:0007023,1.15e-07,114 | |||
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|short_description=p5@OTUD1 | |||
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Latest revision as of 15:48, 17 September 2015
Short description: | p5@OTUD1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_OTUD1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 17bp_to_ENST00000376495, NM_001145373, uc001irr.1_5end |
EntrezGene: | OTUD1 |
HGNC: | 27346 |
UniProt: | Q5VV17 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.67e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.67e-29 | 42 |
defensive cell | 2.89e-26 | 48 |
phagocyte | 2.89e-26 | 48 |
myeloid leukocyte | 1.89e-24 | 72 |
macrophage dendritic cell progenitor | 1.27e-22 | 61 |
granulocyte monocyte progenitor cell | 2.02e-21 | 67 |
monopoietic cell | 3.50e-21 | 59 |
monocyte | 3.50e-21 | 59 |
monoblast | 3.50e-21 | 59 |
promonocyte | 3.50e-21 | 59 |
leukocyte | 1.11e-20 | 136 |
myeloid lineage restricted progenitor cell | 2.01e-19 | 66 |
nongranular leukocyte | 1.25e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 5.84e-16 | 120 |
hematopoietic stem cell | 2.79e-11 | 168 |
myeloid cell | 2.99e-11 | 108 |
common myeloid progenitor | 2.99e-11 | 108 |
hematopoietic cell | 3.07e-10 | 177 |
hematopoietic oligopotent progenitor cell | 3.21e-10 | 161 |
hematopoietic multipotent progenitor cell | 3.21e-10 | 161 |
intermediate monocyte | 2.47e-07 | 9 |
CD14-positive, CD16-positive monocyte | 2.47e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.28e-18 | 76 |
bone element | 8.16e-16 | 82 |
hematopoietic system | 9.98e-15 | 98 |
blood island | 9.98e-15 | 98 |
immune system | 1.03e-13 | 93 |
skeletal element | 1.17e-12 | 90 |
skeletal system | 2.68e-12 | 100 |
hemolymphoid system | 2.89e-12 | 108 |
adult organism | 1.15e-07 | 114 |