FFCP PHASE1:Hg19::chr8:24771265..24771282,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4741 | |EntrezGene=4741 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7734 | |HGNC=7734 | ||
|TSSclassifier=strong | |||
|UniProt=E7ESP9,E7EMV2,P07197 | |UniProt=E7ESP9,E7EMV2,P07197 | ||
|association_with_transcript=0bp_to_ENST00000437366,ENST00000518131,ENST00000521540,ENST00000523467,NM_005382,uc003xed.3,uc011lac.1_5end | |association_with_transcript=0bp_to_ENST00000437366,ENST00000518131,ENST00000521540,ENST00000523467,NM_005382,uc003xed.3,uc011lac.1_5end | ||
|cluster_id=chr8:24771265..24771282,+ | |||
|coexpression_cluster_id=C247 | |coexpression_cluster_id=C247 | ||
|description=CAGE_peak_1_at_NEFM_5end | |description=CAGE_peak_1_at_NEFM_5end | ||
|id=chr8:24771265..24771282,+ | |id=chr8:24771265..24771282,+ | ||
|ontology_enrichment_celltype=CL:0000393!9.34e-11!60;CL:0000211!9.34e-11!60;CL:0000192!4.24e-09!42;CL:0000514!4.24e-09!42;CL:0000055!8.97e-09!180;CL:0000680!1.41e-08!57;CL:0000056!1.41e-08!57;CL:0000355!1.41e-08!57;CL:0000187!1.66e-08!54;CL:0000359!2.55e-08!32;CL:0000183!7.63e-08!59 | |ontology_enrichment_celltype=CL:0000393!9.34e-11!60;CL:0000211!9.34e-11!60;CL:0000192!4.24e-09!42;CL:0000514!4.24e-09!42;CL:0000055!8.97e-09!180;CL:0000680!1.41e-08!57;CL:0000056!1.41e-08!57;CL:0000355!1.41e-08!57;CL:0000187!1.66e-08!54;CL:0000359!2.55e-08!32;CL:0000183!7.63e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.04e-07;32!CL:0000192;8.16e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,3.57e-10,61;CL:0000211,3.57e-10,61;CL:0000192,1.26e-08,43;CL:0000514,1.26e-08,43;CL:0000187,1.19e-07,55;CL:0000359,1.29e-07,32;CL:0000680,9.90e-07,58;CL:0000056,9.90e-07,58;CL:0000355,9.90e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.50e-10;82!CL:0000514;8.16e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!9.84e-39!86;UBERON:0001017!2.18e-38!82;UBERON:0000073!1.90e-37!94;UBERON:0001016!1.90e-37!94;UBERON:0002616!1.15e-34!59;UBERON:0001049!1.53e-34!57;UBERON:0005068!1.53e-34!57;UBERON:0006241!1.53e-34!57;UBERON:0007135!1.53e-34!57;UBERON:0004121!1.40e-31!169;UBERON:0000955!6.18e-31!69;UBERON:0006238!6.18e-31!69;UBERON:0000924!2.06e-30!173;UBERON:0006601!2.06e-30!173;UBERON:0003075!3.56e-29!86;UBERON:0007284!3.56e-29!86;UBERON:0002346!2.72e-27!90;UBERON:0002780!8.56e-27!41;UBERON:0001890!8.56e-27!41;UBERON:0006240!8.56e-27!41;UBERON:0000033!1.60e-26!123;UBERON:0000153!1.04e-25!129;UBERON:0007811!1.04e-25!129;UBERON:0003080!1.52e-25!42;UBERON:0000475!2.04e-24!365;UBERON:0002020!1.67e-22!34;UBERON:0003528!1.67e-22!34;UBERON:0001893!2.17e-22!34;UBERON:0002791!1.23e-21!33;UBERON:0003056!1.73e-21!61;UBERON:0001869!2.70e-21!32;UBERON:0007023!4.48e-18!115;UBERON:0000119!4.29e-17!312;UBERON:0000956!7.12e-17!25;UBERON:0000203!7.12e-17!25;UBERON:0002619!7.25e-17!22;UBERON:0000483!2.75e-16!309;UBERON:0001950!1.48e-15!20;UBERON:0000481!5.87e-13!347;UBERON:0000025!8.52e-13!194;UBERON:0004111!9.95e-13!241;UBERON:0000468!2.13e-12!659;UBERON:0000477!1.74e-11!286;UBERON:0000922!1.77e-11!612;UBERON:0000467!2.94e-10!625;UBERON:0000480!4.44e-10!626;UBERON:0003076!5.23e-10!15;UBERON:0003057!5.23e-10!15;UBERON:0000914!1.22e-09!83;UBERON:0002329!1.22e-09!83;UBERON:0003077!1.22e-09!83;UBERON:0003059!1.22e-09!83;UBERON:0007282!1.22e-09!83;UBERON:0009618!1.22e-09!83;UBERON:0007285!1.22e-09!83;UBERON:0002050!1.69e-09!605;UBERON:0005423!1.69e-09!605;UBERON:0000923!3.14e-09!604;UBERON:0005291!3.14e-09!604;UBERON:0006598!3.14e-09!604;UBERON:0002532!3.14e-09!604;UBERON:0004732!1.49e-08!13;UBERON:0001134!1.51e-08!61;UBERON:0002036!1.51e-08!61;UBERON:0003082!1.51e-08!61;UBERON:0002385!1.63e-08!63;UBERON:0001015!1.63e-08!63;UBERON:0000383!1.63e-08!63;UBERON:0000064!2.59e-08!219;UBERON:0000486!2.81e-08!82;UBERON:0004290!4.62e-08!70;UBERON:0004733!4.95e-08!12;UBERON:0002028!4.95e-08!12;UBERON:0007277!4.95e-08!12;UBERON:0002308!4.43e-07!9;UBERON:0000125!4.43e-07!9;UBERON:0002420!5.54e-07!9;UBERON:0007245!5.54e-07!9;UBERON:0010009!5.54e-07!9;UBERON:0010011!5.54e-07!9;UBERON:0000454!5.54e-07!9 | |ontology_enrichment_uberon=UBERON:0005743!9.84e-39!86;UBERON:0001017!2.18e-38!82;UBERON:0000073!1.90e-37!94;UBERON:0001016!1.90e-37!94;UBERON:0002616!1.15e-34!59;UBERON:0001049!1.53e-34!57;UBERON:0005068!1.53e-34!57;UBERON:0006241!1.53e-34!57;UBERON:0007135!1.53e-34!57;UBERON:0004121!1.40e-31!169;UBERON:0000955!6.18e-31!69;UBERON:0006238!6.18e-31!69;UBERON:0000924!2.06e-30!173;UBERON:0006601!2.06e-30!173;UBERON:0003075!3.56e-29!86;UBERON:0007284!3.56e-29!86;UBERON:0002346!2.72e-27!90;UBERON:0002780!8.56e-27!41;UBERON:0001890!8.56e-27!41;UBERON:0006240!8.56e-27!41;UBERON:0000033!1.60e-26!123;UBERON:0000153!1.04e-25!129;UBERON:0007811!1.04e-25!129;UBERON:0003080!1.52e-25!42;UBERON:0000475!2.04e-24!365;UBERON:0002020!1.67e-22!34;UBERON:0003528!1.67e-22!34;UBERON:0001893!2.17e-22!34;UBERON:0002791!1.23e-21!33;UBERON:0003056!1.73e-21!61;UBERON:0001869!2.70e-21!32;UBERON:0007023!4.48e-18!115;UBERON:0000119!4.29e-17!312;UBERON:0000956!7.12e-17!25;UBERON:0000203!7.12e-17!25;UBERON:0002619!7.25e-17!22;UBERON:0000483!2.75e-16!309;UBERON:0001950!1.48e-15!20;UBERON:0000481!5.87e-13!347;UBERON:0000025!8.52e-13!194;UBERON:0004111!9.95e-13!241;UBERON:0000468!2.13e-12!659;UBERON:0000477!1.74e-11!286;UBERON:0000922!1.77e-11!612;UBERON:0000467!2.94e-10!625;UBERON:0000480!4.44e-10!626;UBERON:0003076!5.23e-10!15;UBERON:0003057!5.23e-10!15;UBERON:0000914!1.22e-09!83;UBERON:0002329!1.22e-09!83;UBERON:0003077!1.22e-09!83;UBERON:0003059!1.22e-09!83;UBERON:0007282!1.22e-09!83;UBERON:0009618!1.22e-09!83;UBERON:0007285!1.22e-09!83;UBERON:0002050!1.69e-09!605;UBERON:0005423!1.69e-09!605;UBERON:0000923!3.14e-09!604;UBERON:0005291!3.14e-09!604;UBERON:0006598!3.14e-09!604;UBERON:0002532!3.14e-09!604;UBERON:0004732!1.49e-08!13;UBERON:0001134!1.51e-08!61;UBERON:0002036!1.51e-08!61;UBERON:0003082!1.51e-08!61;UBERON:0002385!1.63e-08!63;UBERON:0001015!1.63e-08!63;UBERON:0000383!1.63e-08!63;UBERON:0000064!2.59e-08!219;UBERON:0000486!2.81e-08!82;UBERON:0004290!4.62e-08!70;UBERON:0004733!4.95e-08!12;UBERON:0002028!4.95e-08!12;UBERON:0007277!4.95e-08!12;UBERON:0002308!4.43e-07!9;UBERON:0000125!4.43e-07!9;UBERON:0002420!5.54e-07!9;UBERON:0007245!5.54e-07!9;UBERON:0010009!5.54e-07!9;UBERON:0010011!5.54e-07!9;UBERON:0000454!5.54e-07!9 | ||
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| ||
|short_description=p1@NEFM | |short_description=p1@NEFM | ||
}} | }} |
Latest revision as of 15:35, 17 September 2015
Short description: | p1@NEFM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NEFM_5end |
Coexpression cluster: | C247_pons_locus_medulla_spinal_paracentral_medial_occipital |
Association with transcript: | 0bp_to_ENST00000437366, ENST00000518131, ENST00000521540, ENST00000523467, NM_005382, uc003xed.3, uc011lac.1_5end |
EntrezGene: | NEFM |
HGNC: | 7734 |
UniProt: | E7ESP9E7EMV2P07197 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 3.57e-10 | 61 |
electrically active cell | 3.57e-10 | 61 |
smooth muscle cell | 1.26e-08 | 43 |
smooth muscle myoblast | 1.26e-08 | 43 |
muscle cell | 1.19e-07 | 55 |
vascular associated smooth muscle cell | 1.29e-07 | 32 |
muscle precursor cell | 9.90e-07 | 58 |
myoblast | 9.90e-07 | 58 |
multi-potent skeletal muscle stem cell | 9.90e-07 | 58 |