FFCP PHASE1:Hg19::chr17:7452159..7452177,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:7452159..7452177,+ to FFCP PHASE1:Hg19::chr17:7452159..7452177,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=407977,8742 | |EntrezGene=407977,8742 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11927,33537 | |HGNC=11927,33537 | ||
|TSSclassifier=strong | |||
|UniProt=O43508 | |UniProt=O43508 | ||
|association_with_transcript=-30bp_to_ENST00000293825_5end | |||
|cluster_id=chr17:7452159..7452177,+ | |||
|description=CAGE_peak_4_at_TNFSF12-TNFSF13_5end,CAGE_peak_4_at_TNFSF12_5end | |||
|id=chr17:7452159..7452177,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.37e-09;3!UBERON:0006601;1.15e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.40e-08;3!DOID:127;2.40e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,9.09e-09,3;DOID:127,9.09e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.57e-21!57;UBERON:0005068!4.57e-21!57;UBERON:0006241!4.57e-21!57;UBERON:0007135!4.57e-21!57;UBERON:0007023!1.78e-19!115;UBERON:0002616!4.64e-19!59;UBERON:0000955!5.11e-18!69;UBERON:0006238!5.11e-18!69;UBERON:0002020!7.47e-18!34;UBERON:0003528!7.47e-18!34;UBERON:0001017!2.60e-17!82;UBERON:0001893!3.70e-17!34;UBERON:0005743!5.31e-17!86;UBERON:0001869!5.73e-17!32;UBERON:0003080!1.35e-16!42;UBERON:0002791!1.61e-16!33;UBERON:0000073!2.35e-16!94;UBERON:0001016!2.35e-16!94;UBERON:0002780!5.31e-16!41;UBERON:0001890!5.31e-16!41;UBERON:0006240!5.31e-16!41;UBERON:0003075!7.96e-16!86;UBERON:0007284!7.96e-16!86;UBERON:0002619!5.21e-15!22;UBERON:0002346!2.47e-14!90;UBERON:0000025!8.01e-14!194;UBERON:0001950!1.05e-13!20;UBERON:0000956!5.17e-13!25;UBERON:0000203!5.17e-13!25;UBERON:0004111!1.54e-12!241;UBERON:0000477!3.27e-12!286;UBERON:0003056!3.80e-12!61;UBERON:0000033!2.21e-10!123;UBERON:0000153!2.34e-10!129;UBERON:0007811!2.34e-10!129;UBERON:0000467!4.15e-09!625;UBERON:0004121!4.38e-09!169;UBERON:0000480!6.05e-09!626;UBERON:0000924!1.99e-08!173;UBERON:0006601!1.99e-08!173;UBERON:0000468!2.33e-08!659;UBERON:0000064!1.75e-07!219;UBERON:0000923!2.28e-07!604;UBERON:0005291!2.28e-07!604;UBERON:0006598!2.28e-07!604;UBERON:0002532!2.28e-07!604;UBERON:0002050!3.18e-07!605;UBERON:0005423!3.18e-07!605;UBERON:0000922!6.58e-07!612;UBERON:0002420!7.67e-07!9;UBERON:0007245!7.67e-07!9;UBERON:0010009!7.67e-07!9;UBERON:0010011!7.67e-07!9;UBERON:0000454!7.67e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.74e-50;22!UBERON:0001950;1.14e-45;20!UBERON:0001869;5.52e-45;32!UBERON:0002791;6.33e-45;32!UBERON:0000956;1.88e-43;25!UBERON:0000203;1.88e-43;25!UBERON:0003528;4.01e-43;34!UBERON:0002020;4.01e-43;34!UBERON:0001893;2.27e-42;34!UBERON:0002780;3.53e-32;41!UBERON:0001890;3.53e-32;41!UBERON:0000073;7.87e-26;53!UBERON:0002616;7.87e-26;53!UBERON:0000955;6.96e-21;68!UBERON:0001017;2.02e-17;75!UBERON:0000200;1.70e-15;6!UBERON:0001016;4.64e-14;83!UBERON:0001871;1.07e-13;6!UBERON:0002420;1.61e-13;9!UBERON:0007245;1.61e-13;9!UBERON:0010009;1.61e-13;9!UBERON:0010011;1.61e-13;9!UBERON:0000454;1.61e-13;9!UBERON:0000349;4.91e-13;5!UBERON:0001872;6.49e-13;5!UBERON:0002021;6.49e-13;5!UBERON:0007023;4.94e-10;114!UBERON:0000125;1.32e-09;9!UBERON:0002308;1.32e-09;9!UBERON:0009663;6.03e-09;7!UBERON:0001870;1.02e-08;3!UBERON:0002037;9.52e-08;6!UBERON:0011216;1.22e-07;132!UBERON:0002680;1.94e-07;9!UBERON:0001895;1.94e-07;9!UBERON:0004732;7.02e-07;13!UBERON:0001876;9.74e-07;2 | |||
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| ||
|short_description=p4@TNFSF12-TNFSF13,p4@TNFSF12 | |||
}} | }} |
Latest revision as of 15:23, 17 September 2015
Short description: | p4@TNFSF12-TNFSF13, p4@TNFSF12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TNFSF12-TNFSF13_5end, CAGE_peak_4_at_TNFSF12_5end |
Coexpression cluster: | NA |
Association with transcript: | -30bp_to_ENST00000293825_5end |
EntrezGene: | 407977,8742 |
HGNC: | 33537&submit=Submit 11927, 33537 |
UniProt: | O43508 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 9.09e-09 | 3 |
leiomyoma | 9.09e-09 | 3 |