FFCP PHASE1:Hg19::chr11:32112612..32112660,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5954 | |EntrezGene=5954 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9934 | |HGNC=9934 | ||
|TSSclassifier=strong | |||
|UniProt=E9PNT6 | |UniProt=E9PNT6 | ||
|association_with_transcript=0bp_to_ENST00000400416_5end | |association_with_transcript=0bp_to_ENST00000400416_5end | ||
|cluster_id=chr11:32112612..32112660,+ | |||
|coexpression_cluster_id=C3142 | |||
|description=CAGE_peak_1_at_RCN1_5end | |description=CAGE_peak_1_at_RCN1_5end | ||
|id=chr11:32112612..32112660,+ | |id=chr11:32112612..32112660,+ | ||
|ontology_enrichment_celltype=CL:0000055!7.28e-40!180;CL:0000222!1.16e-22!119;CL:0000057!1.94e-20!75;CL:0000220!1.24e-19!246;CL:0002321!2.25e-19!248;CL:0000548!2.75e-19!679;CL:0000004!2.75e-19!679;CL:0000255!2.75e-19!679;CL:0000012!9.83e-19!682;CL:0000680!7.91e-18!57;CL:0000056!7.91e-18!57;CL:0000355!7.91e-18!57;CL:0000187!1.25e-17!54;CL:0000183!3.12e-16!59;CL:0000393!3.72e-15!60;CL:0000211!3.72e-15!60;CL:0000192!1.19e-13!42;CL:0000514!1.19e-13!42;CL:0000144!2.05e-13!625;CL:0002371!1.90e-11!591;CL:0000359!2.82e-10!32;CL:0002620!1.45e-07!23;CL:0002139!7.42e-07!24;CL:0000003!9.74e-07!722 | |ontology_enrichment_celltype=CL:0000055!7.28e-40!180;CL:0000222!1.16e-22!119;CL:0000057!1.94e-20!75;CL:0000220!1.24e-19!246;CL:0002321!2.25e-19!248;CL:0000548!2.75e-19!679;CL:0000004!2.75e-19!679;CL:0000255!2.75e-19!679;CL:0000012!9.83e-19!682;CL:0000680!7.91e-18!57;CL:0000056!7.91e-18!57;CL:0000355!7.91e-18!57;CL:0000187!1.25e-17!54;CL:0000183!3.12e-16!59;CL:0000393!3.72e-15!60;CL:0000211!3.72e-15!60;CL:0000192!1.19e-13!42;CL:0000514!1.19e-13!42;CL:0000144!2.05e-13!625;CL:0002371!1.90e-11!591;CL:0000359!2.82e-10!32;CL:0002620!1.45e-07!23;CL:0002139!7.42e-07!24;CL:0000003!9.74e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0000192;3.57e-10;43!CL:0000187;4.59e-10;55!CL:0000359;1.34e-09;32!CL:0000134;3.32e-09;55!CL:0000723;4.31e-09;61!CL:0000048;1.17e-08;58!CL:0000057;1.19e-08;73!CL:0000393;1.61e-08;61!CL:0000211;1.61e-08;61!CL:0002620;1.45e-07;23!CL:0002320;2.54e-07;188!CL:0002139;7.86e-07;24!CL:0000034;9.83e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.78e-23,121;CL:0000057,6.39e-21,76;CL:0002321,8.98e-20,250;CL:0000680,3.42e-18,58;CL:0000056,3.42e-18,58;CL:0000355,3.42e-18,58;CL:0000187,5.43e-18,55;CL:0000393,1.65e-15,61;CL:0000211,1.65e-15,61;CL:0000192,5.27e-14,43;CL:0000514,5.27e-14,43;CL:0000359,2.82e-10,32;CL:0002620,1.45e-07,23;CL:0002139,7.42e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000514;3.57e-10;43!CL:0000355;9.79e-10;58 | |||
|ontology_enrichment_disease=DOID:2394!2.46e-08!14 | |ontology_enrichment_disease=DOID:2394!2.46e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.41e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.46e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!8.63e-20!83;UBERON:0002329!8.63e-20!83;UBERON:0003077!8.63e-20!83;UBERON:0003059!8.63e-20!83;UBERON:0007282!8.63e-20!83;UBERON:0009618!8.63e-20!83;UBERON:0007285!8.63e-20!83;UBERON:0004290!7.15e-19!70;UBERON:0002049!1.03e-18!79;UBERON:0007798!1.03e-18!79;UBERON:0005256!1.60e-18!143;UBERON:0000486!1.75e-17!82;UBERON:0000490!2.21e-17!138;UBERON:0001134!1.50e-16!61;UBERON:0002036!1.50e-16!61;UBERON:0003082!1.50e-16!61;UBERON:0002100!1.96e-16!216;UBERON:0004872!1.09e-15!84;UBERON:0002385!1.36e-15!63;UBERON:0001015!1.36e-15!63;UBERON:0000383!1.36e-15!63;UBERON:0000055!2.70e-15!69;UBERON:0003914!1.90e-14!118;UBERON:0003104!1.19e-13!238;UBERON:0009142!1.19e-13!238;UBERON:0001981!3.55e-13!60;UBERON:0007500!3.55e-13!60;UBERON:0004537!3.55e-13!60;UBERON:0006965!3.55e-13!60;UBERON:0004535!6.02e-13!110;UBERON:0001009!2.97e-12!113;UBERON:0001637!1.44e-11!42;UBERON:0003509!1.44e-11!42;UBERON:0004572!1.44e-11!42;UBERON:0000475!2.89e-11!365;UBERON:0000468!1.58e-10!659;UBERON:0004573!2.47e-10!33;UBERON:0004571!2.47e-10!33;UBERON:0000481!4.65e-10!347;UBERON:0003102!1.54e-09!95;UBERON:0000926!1.64e-09!448;UBERON:0004120!1.64e-09!448;UBERON:0006603!1.64e-09!448;UBERON:0000119!1.86e-09!312;UBERON:0000483!2.47e-09!309;UBERON:0000467!8.98e-09!625;UBERON:0000480!1.13e-08!626;UBERON:0002199!7.05e-08!45;UBERON:0002416!7.05e-08!45;UBERON:0000947!9.50e-08!21;UBERON:0010191!9.50e-08!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;6.78e-10;33!UBERON:0004571;6.78e-10;33!UBERON:0001637;8.06e-09;42!UBERON:0003509;8.06e-09;42!UBERON:0004572;8.06e-09;42!UBERON:0000055;2.62e-08;65!UBERON:0002049;4.74e-08;75!UBERON:0007798;4.74e-08;75!UBERON:0007500;7.07e-08;56!UBERON:0001981;7.07e-08;56!UBERON:0004537;7.07e-08;56!UBERON:0000947;9.20e-08;21!UBERON:0010191;9.20e-08;21!UBERON:0002384;3.69e-07;198!UBERON:0002385;6.66e-07;31!UBERON:0001015;6.66e-07;31!UBERON:0000383;6.66e-07;31 | |||
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| ||
|short_description=p1@RCN1 | |short_description=p1@RCN1 | ||
}} | }} |
Latest revision as of 15:19, 17 September 2015
Short description: | p1@RCN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RCN1_5end |
Coexpression cluster: | C3142_Smooth_mesenchymal_small_Sertoli_Lens_Fibroblast_anaplastic |
Association with transcript: | 0bp_to_ENST00000400416_5end |
EntrezGene: | RCN1 |
HGNC: | 9934 |
UniProt: | E9PNT6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.78e-23 | 121 |
fibroblast | 6.39e-21 | 76 |
embryonic cell | 8.98e-20 | 250 |
muscle precursor cell | 3.42e-18 | 58 |
myoblast | 3.42e-18 | 58 |
multi-potent skeletal muscle stem cell | 3.42e-18 | 58 |
muscle cell | 5.43e-18 | 55 |
electrically responsive cell | 1.65e-15 | 61 |
electrically active cell | 1.65e-15 | 61 |
smooth muscle cell | 5.27e-14 | 43 |
smooth muscle myoblast | 5.27e-14 | 43 |
vascular associated smooth muscle cell | 2.82e-10 | 32 |
skin fibroblast | 1.45e-07 | 23 |
endothelial cell of vascular tree | 7.42e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.46e-08 | 14 |