FFCP PHASE1:Hg19::chr17:74463650..74463673,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=15 | |EntrezGene=15 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19 | |HGNC=19 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002jro.2_5end | |association_with_transcript=0bp_to_uc002jro.2_5end | ||
|cluster_id=chr17:74463650..74463673,+ | |||
|coexpression_cluster_id=C73 | |coexpression_cluster_id=C73 | ||
|description=CAGE_peak_3_at_AANAT_5end | |description=CAGE_peak_3_at_AANAT_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!2.16e-07!5 | |ontology_enrichment_celltype=CL:0002322!2.16e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000333;3.12e-15;5 | |ontology_enrichment_celltype_v019=CL:0000333;3.12e-15;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000333,5.20e-07,41 | |||
|ontology_enrichment_development_v019=UBERON:0003056;7.02e-25;3!UBERON:0006238;1.42e-07;10!UBERON:0006601;7.38e-07;82 | |ontology_enrichment_development_v019=UBERON:0003056;7.02e-25;3!UBERON:0006238;1.42e-07;10!UBERON:0006601;7.38e-07;82 | ||
|ontology_enrichment_disease=DOID:3095!2.29e-09!22;DOID:2994!2.29e-09!22;DOID:171!3.92e-08!10;DOID:3093!5.63e-07!11 | |ontology_enrichment_disease=DOID:3095!2.29e-09!22;DOID:2994!2.29e-09!22;DOID:171!3.92e-08!10;DOID:3093!5.63e-07!11 | ||
|ontology_enrichment_disease_v019=DOID:3093;3.30e-14;11!DOID:169;7.33e-13;6!DOID:3193;2.99e-10;2!DOID:962;2.99e-10;2!DOID:171;4.34e-08;10!DOID:3095;6.38e-08;22!DOID:2994;6.38e-08;22!DOID:1192;2.97e-07;3 | |ontology_enrichment_disease_v019=DOID:3093;3.30e-14;11!DOID:169;7.33e-13;6!DOID:3193;2.99e-10;2!DOID:962;2.99e-10;2!DOID:171;4.34e-08;10!DOID:3095;6.38e-08;22!DOID:2994;6.38e-08;22!DOID:1192;2.97e-07;3 | ||
|ontology_enrichment_disease_v019_2=DOID:3093,3.61e-14,11;DOID:169,8.78e-13,6;DOID:3193,3.58e-10,2;DOID:962,3.58e-10,2;DOID:171,4.83e-08,10;DOID:3095,6.85e-08,22;DOID:2994,6.85e-08,22;DOID:1192,3.35e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0003296!5.34e-20!4;UBERON:0010133!5.34e-20!4;UBERON:0001905!1.59e-18!2;UBERON:0002757!1.59e-18!2;UBERON:0010134!1.59e-18!2;UBERON:0002784!1.59e-18!2;UBERON:0005408!1.59e-18!2;UBERON:0001899!1.59e-18!2;UBERON:0000966!8.62e-16!5;UBERON:0005388!8.62e-16!5;UBERON:0001802!8.62e-16!5;UBERON:0000073!2.08e-12!94;UBERON:0001016!2.08e-12!94;UBERON:0001894!1.14e-11!7;UBERON:0006222!1.14e-11!7;UBERON:0005743!9.06e-10!86;UBERON:0000013!1.12e-07!5;UBERON:0002410!1.12e-07!5;UBERON:0000970!5.57e-07!20;UBERON:0000924!6.61e-07!173;UBERON:0006601!6.61e-07!173;UBERON:0001017!7.77e-07!82 | |ontology_enrichment_uberon=UBERON:0003296!5.34e-20!4;UBERON:0010133!5.34e-20!4;UBERON:0001905!1.59e-18!2;UBERON:0002757!1.59e-18!2;UBERON:0010134!1.59e-18!2;UBERON:0002784!1.59e-18!2;UBERON:0005408!1.59e-18!2;UBERON:0001899!1.59e-18!2;UBERON:0000966!8.62e-16!5;UBERON:0005388!8.62e-16!5;UBERON:0001802!8.62e-16!5;UBERON:0000073!2.08e-12!94;UBERON:0001016!2.08e-12!94;UBERON:0001894!1.14e-11!7;UBERON:0006222!1.14e-11!7;UBERON:0005743!9.06e-10!86;UBERON:0000013!1.12e-07!5;UBERON:0002410!1.12e-07!5;UBERON:0000970!5.57e-07!20;UBERON:0000924!6.61e-07!173;UBERON:0006601!6.61e-07!173;UBERON:0001017!7.77e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.30e-37;2!UBERON:0002757;1.30e-37;2!UBERON:0010134;1.30e-37;2!UBERON:0005408;1.30e-37;2!UBERON:0001899;1.30e-37;2!UBERON:0003296;2.26e-19;4!UBERON:0010133;2.26e-19;4!UBERON:0002784;2.26e-19;4!UBERON:0000966;2.34e-15;5!UBERON:0005388;2.34e-15;5!UBERON:0001802;2.34e-15;5!UBERON:0000013;3.12e-15;5!UBERON:0002410;3.12e-15;5!UBERON:0001894;1.68e-11;7!UBERON:0002360;2.27e-10;2!UBERON:0000094;2.27e-10;2!UBERON:0010743;2.27e-10;2!UBERON:0003714;2.99e-10;2!UBERON:0000010;6.88e-09;8!UBERON:0000970;9.23e-09;20!UBERON:0002104;2.27e-08;21!UBERON:0000020;1.08e-07;23!UBERON:0001032;2.15e-07;24!UBERON:0004456;2.15e-07;24 | |ontology_enrichment_uberon_v019=UBERON:0001905;1.30e-37;2!UBERON:0002757;1.30e-37;2!UBERON:0010134;1.30e-37;2!UBERON:0005408;1.30e-37;2!UBERON:0001899;1.30e-37;2!UBERON:0003296;2.26e-19;4!UBERON:0010133;2.26e-19;4!UBERON:0002784;2.26e-19;4!UBERON:0000966;2.34e-15;5!UBERON:0005388;2.34e-15;5!UBERON:0001802;2.34e-15;5!UBERON:0000013;3.12e-15;5!UBERON:0002410;3.12e-15;5!UBERON:0001894;1.68e-11;7!UBERON:0002360;2.27e-10;2!UBERON:0000094;2.27e-10;2!UBERON:0010743;2.27e-10;2!UBERON:0003714;2.99e-10;2!UBERON:0000010;6.88e-09;8!UBERON:0000970;9.23e-09;20!UBERON:0002104;2.27e-08;21!UBERON:0000020;1.08e-07;23!UBERON:0001032;2.15e-07;24!UBERON:0004456;2.15e-07;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.30e-37,2;UBERON:0002757,1.30e-37,2;UBERON:0010134,1.30e-37,2;UBERON:0005408,1.30e-37,2;UBERON:0001899,1.30e-37,2;UBERON:0003296,2.26e-19,4;UBERON:0010133,2.26e-19,4;UBERON:0002784,2.26e-19,4;UBERON:0000013,3.88e-15,5;UBERON:0002410,3.88e-15,5;UBERON:0000966,5.42e-13,6;UBERON:0005388,5.42e-13,6;UBERON:0001802,5.42e-13,6;UBERON:0001894,1.68e-11,7;UBERON:0006222,1.68e-11,7;UBERON:0002360,2.27e-10,2;UBERON:0000094,2.27e-10,2;UBERON:0010743,2.27e-10,2;UBERON:0003714,3.58e-10,2;UBERON:0001016,2.56e-09,89;UBERON:0000010,7.75e-09,8;UBERON:0000970,2.21e-08,21;UBERON:0002104,2.21e-08,21;UBERON:0000020,2.11e-07,24;UBERON:0001032,2.11e-07,24;UBERON:0004456,2.11e-07,24 | |||
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|short_description=p3@AANAT | |short_description=p3@AANAT | ||
}} | }} |
Latest revision as of 15:10, 17 September 2015
Short description: | p3@AANAT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AANAT_5end |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | 0bp_to_uc002jro.2_5end |
EntrezGene: | AANAT |
HGNC: | 19 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 5.20e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.30e-37 | 2 |
regional part of epithalamus | 1.30e-37 | 2 |
secretory circumventricular organ | 1.30e-37 | 2 |
circumventricular organ | 1.30e-37 | 2 |
epithalamus | 1.30e-37 | 2 |
gland of diencephalon | 2.26e-19 | 4 |
neuroendocrine gland | 2.26e-19 | 4 |
regional part of diencephalon | 2.26e-19 | 4 |
sympathetic nervous system | 3.88e-15 | 5 |
autonomic nervous system | 3.88e-15 | 5 |
retina | 5.42e-13 | 6 |
photoreceptor array | 5.42e-13 | 6 |
posterior segment of eyeball | 5.42e-13 | 6 |
diencephalon | 1.68e-11 | 7 |
future diencephalon | 1.68e-11 | 7 |
meninx | 2.27e-10 | 2 |
membrane organ | 2.27e-10 | 2 |
meningeal cluster | 2.27e-10 | 2 |
neural tissue | 3.58e-10 | 2 |
nervous system | 2.56e-09 | 89 |
peripheral nervous system | 7.75e-09 | 8 |
eye | 2.21e-08 | 21 |
visual system | 2.21e-08 | 21 |
sense organ | 2.11e-07 | 24 |
sensory system | 2.11e-07 | 24 |
entire sense organ system | 2.11e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 3.61e-14 | 11 |
neuroendocrine tumor | 8.78e-13 | 6 |
peripheral nerve sheath neoplasm | 3.58e-10 | 2 |
neurofibroma | 3.58e-10 | 2 |
neuroectodermal tumor | 4.83e-08 | 10 |
germ cell and embryonal cancer | 6.85e-08 | 22 |
germ cell cancer | 6.85e-08 | 22 |
peripheral nervous system neoplasm | 3.35e-07 | 3 |