FFCP PHASE1:Hg19::chr15:42066937..42066956,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:42066937..42066956,+
|short_description=p4@MAPKBP1
|description=CAGE_peak_4_at_MAPKBP1_5end
|association_with_transcript=37bp_to_ENST00000510535_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23005 | |EntrezGene=23005 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29536 | |HGNC=29536 | ||
|TSSclassifier=strong | |||
|UniProt=D6R9F7 | |UniProt=D6R9F7 | ||
|association_with_transcript=37bp_to_ENST00000510535_5end | |||
|cluster_id=chr15:42066937..42066956,+ | |||
|description=CAGE_peak_4_at_MAPKBP1_5end | |||
|id=chr15:42066937..42066956,+ | |||
|ontology_enrichment_celltype=CL:0000220!3.13e-11!246;CL:0002321!6.08e-11!248;CL:0002139!8.96e-10!24;CL:0000071!1.48e-07!18;CL:0002546!1.48e-07!18;CL:0000115!4.89e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.65e-19;24!CL:0000115;2.45e-16;36!CL:0000071;1.41e-15;18!CL:0002543;1.58e-11;6!CL:0002078;2.50e-10;45!CL:0002202;2.75e-08;9!CL:0002632;2.75e-08;9!CL:0002159;1.27e-07;14!CL:0002328;1.75e-07;3!CL:0002368;1.97e-07;13!CL:0000307;4.13e-07;3!CL:0000213;8.54e-07;58!CL:0000215;8.54e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.88e-20,36;CL:0002139,2.05e-19,24;CL:0000071,2.85e-16,18;CL:0002546,2.85e-16,18;CL:0002078,4.34e-15,45;CL:0002543,7.31e-12,6;CL:0002321,1.93e-11,250;CL:0000213,2.31e-10,58;CL:0000215,2.31e-10,58;CL:0002202,1.72e-08,9;CL:0002632,1.72e-08,9;CL:0000076,2.01e-08,63;CL:0002368,1.36e-07,13;CL:0002159,1.39e-07,14;CL:0002328,1.45e-07,3;CL:0000068,2.39e-07,3;CL:0000069,2.39e-07,3;CL:0000307,2.39e-07,3;CL:0000377,2.39e-07,3;CL:0000222,7.27e-07,121;CL:0000066,7.74e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002546;1.41e-15;18!UBERON:0006215;3.58e-07;3!CL:0000377;4.13e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000483!1.74e-12!309;UBERON:0000119!2.27e-12!312;UBERON:0000153!1.38e-10!129;UBERON:0007811!1.38e-10!129;UBERON:0000033!2.77e-10!123;UBERON:0004111!6.20e-10!241;UBERON:0000475!7.13e-10!365;UBERON:0000477!6.33e-09!286;UBERON:0004121!1.66e-08!169;UBERON:0000924!5.02e-08!173;UBERON:0006601!5.02e-08!173;UBERON:0000481!5.41e-08!347;UBERON:0000055!6.54e-08!69;UBERON:0002049!8.13e-08!79;UBERON:0007798!8.13e-08!79;UBERON:0001986!1.48e-07!18;UBERON:0004638!1.48e-07!18;UBERON:0004852!1.48e-07!18;UBERON:0003102!5.00e-07!95;UBERON:0000025!5.99e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.41e-15;18!UBERON:0001986;1.41e-15;18!UBERON:0004852;1.41e-15;18!UBERON:0000487;3.94e-12;22!UBERON:0000490;5.83e-11;33!UBERON:0006914;2.78e-10;25!UBERON:0007196;7.00e-08;15!UBERON:0001558;7.00e-08;15!UBERON:0004815;1.75e-07;3!UBERON:0002031;1.75e-07;3!UBERON:0001638;2.13e-07;9!UBERON:0003920;2.13e-07;9!UBERON:0004582;2.13e-07;9!UBERON:0003126;2.42e-07;7!UBERON:0001005;2.42e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.85e-16,18;UBERON:0001986,2.85e-16,18;UBERON:0004852,2.85e-16,18;UBERON:0000487,1.11e-12,22;UBERON:0006914,9.40e-11,25;UBERON:0000055,8.46e-10,68;UBERON:0002049,1.20e-09,78;UBERON:0007798,1.20e-09,78;UBERON:0007500,4.49e-08,59;UBERON:0001981,4.49e-08,59;UBERON:0004537,4.49e-08,59;UBERON:0006965,4.49e-08,59;UBERON:0007196,5.62e-08,15;UBERON:0001558,5.62e-08,15;UBERON:0010371,1.13e-07,104;UBERON:0001638,1.31e-07,9;UBERON:0003920,1.31e-07,9;UBERON:0004582,1.31e-07,9;UBERON:0004815,1.45e-07,3;UBERON:0002031,1.45e-07,3;UBERON:0003126,2.02e-07,7;UBERON:0001005,2.02e-07,7;UBERON:0005085,6.57e-07,31;UBERON:0000483,8.58e-07,306 | |||
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| ||
|short_description=p4@MAPKBP1 | |||
}} | }} |
Latest revision as of 15:06, 17 September 2015
Short description: | p4@MAPKBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MAPKBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 37bp_to_ENST00000510535_5end |
EntrezGene: | MAPKBP1 |
HGNC: | 29536 |
UniProt: | D6R9F7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.88e-20 | 36 |
endothelial cell of vascular tree | 2.05e-19 | 24 |
blood vessel endothelial cell | 2.85e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.85e-16 | 18 |
meso-epithelial cell | 4.34e-15 | 45 |
vein endothelial cell | 7.31e-12 | 6 |
embryonic cell | 1.93e-11 | 250 |
lining cell | 2.31e-10 | 58 |
barrier cell | 2.31e-10 | 58 |
epithelial cell of tracheobronchial tree | 1.72e-08 | 9 |
epithelial cell of lower respiratory tract | 1.72e-08 | 9 |
squamous epithelial cell | 2.01e-08 | 63 |
respiratory epithelial cell | 1.36e-07 | 13 |
general ecto-epithelial cell | 1.39e-07 | 14 |
bronchial epithelial cell | 1.45e-07 | 3 |
duct epithelial cell | 2.39e-07 | 3 |
branched duct epithelial cell | 2.39e-07 | 3 |
tracheal epithelial cell | 2.39e-07 | 3 |
tracheoblast | 2.39e-07 | 3 |
mesodermal cell | 7.27e-07 | 121 |
epithelial cell | 7.74e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.85e-16 | 18 |
endothelium | 2.85e-16 | 18 |
cardiovascular system endothelium | 2.85e-16 | 18 |
simple squamous epithelium | 1.11e-12 | 22 |
squamous epithelium | 9.40e-11 | 25 |
vessel | 8.46e-10 | 68 |
vasculature | 1.20e-09 | 78 |
vascular system | 1.20e-09 | 78 |
epithelial tube open at both ends | 4.49e-08 | 59 |
blood vessel | 4.49e-08 | 59 |
blood vasculature | 4.49e-08 | 59 |
vascular cord | 4.49e-08 | 59 |
tracheobronchial tree | 5.62e-08 | 15 |
lower respiratory tract | 5.62e-08 | 15 |
ecto-epithelium | 1.13e-07 | 104 |
vein | 1.31e-07 | 9 |
venous blood vessel | 1.31e-07 | 9 |
venous system | 1.31e-07 | 9 |
lower respiratory tract epithelium | 1.45e-07 | 3 |
epithelium of bronchus | 1.45e-07 | 3 |
trachea | 2.02e-07 | 7 |
respiratory airway | 2.02e-07 | 7 |
ectodermal placode | 6.57e-07 | 31 |
epithelium | 8.58e-07 | 306 |