FFCP PHASE1:Hg19::chr11:31838106..31838128,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5954,440034 | |EntrezGene=5954,440034 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9934 | |HGNC=9934 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000506388,NR_033971_5end | |association_with_transcript=0bp_to_ENST00000506388,NR_033971_5end | ||
|cluster_id=chr11:31838106..31838128,+ | |||
|coexpression_cluster_id=C76 | |||
|description=CAGE_peak_9_at_RCN1_5end | |description=CAGE_peak_9_at_RCN1_5end | ||
|id=chr11:31838106..31838128,+ | |id=chr11:31838106..31838128,+ | ||
|ontology_enrichment_celltype=CL:0002605!2.37e-10!3;CL:0000064!3.45e-10!3;CL:0005012!3.45e-10!3;CL:0000067!3.45e-10!3;CL:0002304!3.45e-10!3;CL:0000128!2.71e-07!7;CL:0000126!2.71e-07!7;CL:0000127!2.71e-07!7;CL:0002453!2.71e-07!7 | |ontology_enrichment_celltype=CL:0002605!2.37e-10!3;CL:0000064!3.45e-10!3;CL:0005012!3.45e-10!3;CL:0000067!3.45e-10!3;CL:0002304!3.45e-10!3;CL:0000128!2.71e-07!7;CL:0000126!2.71e-07!7;CL:0000127!2.71e-07!7;CL:0002453!2.71e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002535;1.82e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.82e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.06e-27;3!UBERON:0003056;5.18e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:154;3.52e-11;2!DOID:4236;3.52e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,3.70e-11,2;DOID:4236,3.70e-11,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002037;4.24e-14;6!UBERON:0006955;1.82e-11;2!UBERON:0004801;1.82e-11;2!UBERON:0002680;1.01e-09;9!UBERON:0001895;1.01e-09;9!UBERON:0000970;1.26e-09;20!UBERON:0002104;3.40e-09;21!UBERON:0000020;1.90e-08;23!UBERON:0001032;4.05e-08;24!UBERON:0004456;4.05e-08;24!UBERON:0004733;1.62e-07;12!UBERON:0002028;1.62e-07;12!UBERON:0004732;5.26e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.25e-14,6;UBERON:0006215,3.25e-14,6;UBERON:0006955,1.82e-11,2;UBERON:0004801,1.82e-11,2;UBERON:0002680,8.46e-10,9;UBERON:0001895,8.46e-10,9;UBERON:0010092,8.46e-10,9;UBERON:0000970,3.45e-09,21;UBERON:0002104,3.45e-09,21;UBERON:0000020,4.10e-08,24;UBERON:0001032,4.10e-08,24;UBERON:0004456,4.10e-08,24;UBERON:0004733,1.42e-07,12;UBERON:0002028,1.42e-07,12;UBERON:0007277,1.42e-07,12;UBERON:0004732,4.66e-07,13 | |||
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| ||
|short_description=p9@RCN1 | |short_description=p9@RCN1 | ||
}} | }} |
Latest revision as of 15:05, 17 September 2015
Short description: | p9@RCN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RCN1_5end |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | 0bp_to_ENST00000506388, NR_033971_5end |
EntrezGene: | 5954,440034 |
HGNC: | 9934 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.82e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 3.25e-14 | 6 |
rhombic lip | 3.25e-14 | 6 |
uterine epithelium | 1.82e-11 | 2 |
cervix epithelium | 1.82e-11 | 2 |
regional part of metencephalon | 8.46e-10 | 9 |
metencephalon | 8.46e-10 | 9 |
future metencephalon | 8.46e-10 | 9 |
eye | 3.45e-09 | 21 |
visual system | 3.45e-09 | 21 |
sense organ | 4.10e-08 | 24 |
sensory system | 4.10e-08 | 24 |
entire sense organ system | 4.10e-08 | 24 |
segmental subdivision of hindbrain | 1.42e-07 | 12 |
hindbrain | 1.42e-07 | 12 |
presumptive hindbrain | 1.42e-07 | 12 |
segmental subdivision of nervous system | 4.66e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 3.70e-11 | 2 |
carcinosarcoma | 3.70e-11 | 2 |