FFCP PHASE1:Hg19::chr11:31833736..31833778,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5080 | |EntrezGene=5080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8620 | |HGNC=8620 | ||
|TSSclassifier=strong | |||
|UniProt=E9PKM0 | |UniProt=E9PKM0 | ||
|association_with_transcript=-11bp_to_ENST00000524853_5end | |association_with_transcript=-11bp_to_ENST00000524853_5end | ||
|cluster_id=chr11:31833736..31833778,- | |||
|description=CAGE_peak_13_at_PAX6_5end | |description=CAGE_peak_13_at_PAX6_5end | ||
|id=chr11:31833736..31833778,- | |id=chr11:31833736..31833778,- | ||
|ontology_enrichment_celltype=CL:0002319!5.90e-07!25;CL:0000064!1.00e-06!3;CL:0005012!1.00e-06!3;CL:0000067!1.00e-06!3;CL:0002304!1.00e-06!3 | |ontology_enrichment_celltype=CL:0002319!5.90e-07!25;CL:0000064!1.00e-06!3;CL:0005012!1.00e-06!3;CL:0000067!1.00e-06!3;CL:0002304!1.00e-06!3 | ||
|ontology_enrichment_celltype_v019=CL:0000047;4.07e-16;2!CL:0000064;4.65e-11;3!CL:0000067;4.65e-11;3!CL:0005012;4.65e-11;3!CL:0002304;4.65e-11;3!CL:0000306;1.63e-08;4!CL:0002222;1.63e-08;4!CL:0002224;1.63e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,6.99e-11,3;CL:0000067,6.99e-11,3;CL:0005012,6.99e-11,3;CL:0002304,6.99e-11,3;CL:0000047,2.46e-09,8;CL:0000306,1.77e-08,4;CL:0002222,1.77e-08,4;CL:0002224,1.77e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0005425;6.46e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:6193;2.13e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,2.22e-09,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0007625;3.17e-11;11!UBERON:0001778;4.65e-11;3!UBERON:0001775;4.65e-11;3!UBERON:0000941;6.46e-09;1!UBERON:0001785;6.46e-09;1!UBERON:0002464;6.46e-09;1!UBERON:0004904;6.46e-09;1!UBERON:0001021;6.46e-09;1!UBERON:0002104;7.17e-09;21!UBERON:0001801;7.44e-09;14!UBERON:0010077;1.63e-08;4!UBERON:0005389;1.63e-08;4!UBERON:0000488;1.63e-08;4!UBERON:0000484;1.63e-08;4!UBERON:0000965;1.63e-08;4!UBERON:0001803;1.63e-08;4!UBERON:0001032;9.72e-08;24!UBERON:0004456;9.72e-08;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,4.15e-11,11;UBERON:0001778,6.99e-11,3;UBERON:0001775,6.99e-11,3;UBERON:0000019,2.90e-09,20;UBERON:0000047,2.90e-09,20;UBERON:0010312,2.90e-09,20;UBERON:0004088,2.90e-09,20;UBERON:0010230,2.90e-09,20;UBERON:0003072,2.90e-09,20;UBERON:0004128,2.90e-09,20;UBERON:0003071,2.90e-09,20;UBERON:0000941,5.31e-09,1;UBERON:0001785,5.31e-09,1;UBERON:0002464,5.31e-09,1;UBERON:0004904,5.31e-09,1;UBERON:0001021,5.31e-09,1;UBERON:0003902,5.31e-09,1;UBERON:0005425,5.31e-09,1;UBERON:0000970,8.16e-09,21;UBERON:0002104,8.16e-09,21;UBERON:0001801,9.18e-09,14;UBERON:0010077,1.77e-08,4;UBERON:0005389,1.77e-08,4;UBERON:0000484,1.77e-08,4;UBERON:0002546,1.77e-08,4;UBERON:0000965,1.77e-08,4;UBERON:0001803,1.77e-08,4;UBERON:0003073,1.77e-08,4;UBERON:0005426,1.77e-08,4;UBERON:0001456,2.09e-08,22;UBERON:0000488,2.22e-08,4;UBERON:0000020,1.09e-07,24;UBERON:0001032,1.09e-07,24;UBERON:0004456,1.09e-07,24 | |||
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| ||
|short_description=p13@PAX6 | |short_description=p13@PAX6 | ||
}} | }} |
Latest revision as of 15:03, 17 September 2015
Short description: | p13@PAX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_PAX6_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_ENST00000524853_5end |
EntrezGene: | PAX6 |
HGNC: | 8620 |
UniProt: | E9PKM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 6.99e-11 | 3 |
ciliated epithelial cell | 6.99e-11 | 3 |
multi-ciliated epithelial cell | 6.99e-11 | 3 |
non-pigmented ciliary epithelial cell | 6.99e-11 | 3 |
neuronal stem cell | 2.46e-09 | 8 |
crystallin accumulating cell | 1.77e-08 | 4 |
vertebrate lens cell | 1.77e-08 | 4 |
lens epithelial cell | 1.77e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 4.15e-11 | 11 |
ciliary epithelium | 6.99e-11 | 3 |
ciliary body | 6.99e-11 | 3 |
camera-type eye | 2.90e-09 | 20 |
simple eye | 2.90e-09 | 20 |
immature eye | 2.90e-09 | 20 |
ocular region | 2.90e-09 | 20 |
eyeball of camera-type eye | 2.90e-09 | 20 |
optic cup | 2.90e-09 | 20 |
optic vesicle | 2.90e-09 | 20 |
eye primordium | 2.90e-09 | 20 |
cranial nerve II | 5.31e-09 | 1 |
cranial nerve | 5.31e-09 | 1 |
nerve trunk | 5.31e-09 | 1 |
nerve connecting eye with brain | 5.31e-09 | 1 |
nerve | 5.31e-09 | 1 |
retinal neural layer | 5.31e-09 | 1 |
presumptive neural retina | 5.31e-09 | 1 |
eye | 8.16e-09 | 21 |
visual system | 8.16e-09 | 21 |
anterior segment of eyeball | 9.18e-09 | 14 |
cuboidal epithelium | 1.77e-08 | 4 |
transparent eye structure | 1.77e-08 | 4 |
simple cuboidal epithelium | 1.77e-08 | 4 |
cranial placode | 1.77e-08 | 4 |
lens of camera-type eye | 1.77e-08 | 4 |
epithelium of lens | 1.77e-08 | 4 |
lens placode | 1.77e-08 | 4 |
lens vesicle | 1.77e-08 | 4 |
face | 2.09e-08 | 22 |
atypical epithelium | 2.22e-08 | 4 |
sense organ | 1.09e-07 | 24 |
sensory system | 1.09e-07 | 24 |
entire sense organ system | 1.09e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 2.22e-09 | 1 |