FFCP PHASE1:Hg19::chr1:32739735..32739746,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3932 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6524 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc010ohc.1_5end | |||
|cluster_id=chr1:32739735..32739746,+ | |||
|coexpression_cluster_id=C580 | |||
|description=CAGE_peak_4_at_LCK_5end | |||
|id=chr1:32739735..32739746,+ | |||
|ontology_enrichment_celltype=CL:0000084!4.81e-19!25;CL:0000827!4.81e-19!25;CL:0000838!1.61e-17!52;CL:0000542!4.26e-17!53;CL:0000051!4.26e-17!53;CL:0002322!8.50e-17!5;CL:0000791!1.34e-15!18;CL:0000789!1.34e-15!18;CL:0002420!1.34e-15!18;CL:0002419!1.34e-15!18;CL:0000790!1.34e-15!18;CL:0000625!5.04e-10!11;CL:0000624!2.34e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002322;8.45e-15;5!CL:0000540;7.20e-13;6!CL:0000404;7.20e-13;6!CL:0000084;3.67e-11;25!CL:0000039;9.92e-11;7!CL:0000586;9.92e-11;7!CL:0000785;3.67e-09;1!CL:0000819;3.67e-09;1!CL:0000625;6.11e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,8.25e-15,5;CL:0000540,7.20e-13,6;CL:0000031,7.20e-13,6;CL:0000404,7.20e-13,6;CL:0000084,3.35e-11,25;CL:0000827,3.35e-11,25;CL:0000039,1.08e-10,7;CL:0000586,1.08e-10,7;CL:0000047,8.84e-10,8;CL:0000819,4.87e-09,1;CL:0000838,7.72e-09,52;CL:0000542,1.19e-08,53;CL:0000051,1.19e-08,53;CL:0000625,5.45e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000031;7.20e-13;6!UBERON:0009117;1.17e-07;10!UBERON:0005564;1.17e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;3.67e-09;1!DOID:8675;3.67e-09;1!DOID:0060058;7.33e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,4.87e-09,1;DOID:8675,4.87e-09,1;DOID:0060058,7.96e-08,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;9.06e-18;2!UBERON:0005058;9.06e-18;2!UBERON:0009113;9.06e-18;2!UBERON:0000473;1.88e-09;8!UBERON:0004177;1.24e-07;5!UBERON:0005057;1.24e-07;5!UBERON:0003135;5.28e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.02e-09,8;UBERON:0002370,2.45e-09,4;UBERON:0005058,2.45e-09,4;UBERON:0009113,2.45e-09,4;UBERON:0003295,2.45e-09,4;UBERON:0005562,2.45e-09,4;UBERON:0000974,6.75e-08,10;UBERON:0003135,5.57e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.5705648342378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0.393010762749165,0.411202997999018,0,0,0,0,0,0.294605907474837,0,0.270803863765016,0.128091319725675,0,0,0,0,1.4828656316206,0.535081656179426,1.04535523804977,0,0,0,0,0.318565414324097,1.95325036156926,0,0.451725357233318,1.4078527226986,1.24930726552346,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34171076742555,1.32529768321485,2.78865462886844,0.621966330092223,0.756962552626885,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.9560811695618,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0.540031437238115,0.79312517629427,0,0,0,0,0.432807638929335,10.9558438756558,20.5659891820181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.482525603062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.094728735294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72908500584927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0,0,0,0,0,5.14410075088061,4.26372253451425,4.98528405635022,0,0,0,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0.60896299190448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869526171664951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394308725006267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0.596852325484105,0,0,0,0.452888530700021,0,0,0,0,0,0,0,0,0,0,0.386747327841463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0,0,2.14176542458162,1.06886962106224,1.47031839255752,0,0,0,0,0,0,1.1903221573187,34.1029443934112,19.5535350031952,0,0,0,0,0,0.26940821205835,0,0,0.162806537221949,0,0,0,0,0,0,0,4.83057104618463,0 | |||
|short_description=p4@LCK | |||
}} |
Latest revision as of 14:59, 17 September 2015
Short description: | p4@LCK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LCK_5end |
Coexpression cluster: | C580_chronic_thymus_Hodgkin_acute_iPS_vein_Burkitt |
Association with transcript: | 0bp_to_uc010ohc.1_5end |
EntrezGene: | LCK |
HGNC: | 6524 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 8.25e-15 | 5 |
neuron | 7.20e-13 | 6 |
neuroblast | 7.20e-13 | 6 |
electrically signaling cell | 7.20e-13 | 6 |
T cell | 3.35e-11 | 25 |
pro-T cell | 3.35e-11 | 25 |
germ line cell | 1.08e-10 | 7 |
germ cell | 1.08e-10 | 7 |
neuronal stem cell | 8.84e-10 | 8 |
B-1 B cell | 4.87e-09 | 1 |
lymphoid lineage restricted progenitor cell | 7.72e-09 | 52 |
lymphocyte | 1.19e-08 | 53 |
common lymphoid progenitor | 1.19e-08 | 53 |
CD8-positive, alpha-beta T cell | 5.45e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
testis | 2.02e-09 | 8 |
thymus | 2.45e-09 | 4 |
hemolymphoid system gland | 2.45e-09 | 4 |
thymic region | 2.45e-09 | 4 |
pharyngeal gland | 2.45e-09 | 4 |
thymus primordium | 2.45e-09 | 4 |
neck | 6.75e-08 | 10 |
male reproductive organ | 5.57e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 4.87e-09 | 1 |
lymphosarcoma | 4.87e-09 | 1 |
lymphoma | 7.96e-08 | 10 |