FFCP PHASE1:Hg19::chr1:156052354..156052380,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4000 | |EntrezGene=4000 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6636 | |HGNC=6636 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000368301,ENST00000502751,uc001fnf.1_5end | |association_with_transcript=0bp_to_ENST00000368301,ENST00000502751,uc001fnf.1_5end | ||
|cluster_id=chr1:156052354..156052380,+ | |||
|description=CAGE_peak_9_at_LMNA_5end | |description=CAGE_peak_9_at_LMNA_5end | ||
|id=chr1:156052354..156052380,+ | |id=chr1:156052354..156052380,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.36e-08!180 | |ontology_enrichment_celltype=CL:0000055!3.36e-08!180 | ||
|ontology_enrichment_celltype_v019=CL:0002319;6.47e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.06e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006238;1.19e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!4.12e-22!86;UBERON:0001017!2.45e-21!82;UBERON:0000073!2.51e-21!94;UBERON:0001016!2.51e-21!94;UBERON:0000955!1.11e-19!69;UBERON:0006238!1.11e-19!69;UBERON:0000924!3.49e-19!173;UBERON:0006601!3.49e-19!173;UBERON:0004121!8.93e-19!169;UBERON:0001049!3.05e-17!57;UBERON:0005068!3.05e-17!57;UBERON:0006241!3.05e-17!57;UBERON:0007135!3.05e-17!57;UBERON:0000475!7.82e-17!365;UBERON:0002346!3.11e-16!90;UBERON:0000033!4.46e-16!123;UBERON:0003075!5.97e-16!86;UBERON:0007284!5.97e-16!86;UBERON:0002616!1.71e-15!59;UBERON:0000153!6.12e-15!129;UBERON:0007811!6.12e-15!129;UBERON:0000468!9.85e-14!659;UBERON:0000483!1.81e-12!309;UBERON:0000119!5.14e-12!312;UBERON:0004111!1.23e-11!241;UBERON:0000481!2.75e-11!347;UBERON:0000477!3.52e-11!286;UBERON:0003080!3.53e-11!42;UBERON:0002020!7.74e-11!34;UBERON:0003528!7.74e-11!34;UBERON:0002780!9.38e-11!41;UBERON:0001890!9.38e-11!41;UBERON:0006240!9.38e-11!41;UBERON:0000467!9.45e-11!625;UBERON:0000480!1.55e-10!626;UBERON:0000922!2.38e-10!612;UBERON:0001893!2.38e-10!34;UBERON:0002791!3.58e-10!33;UBERON:0003056!3.87e-10!61;UBERON:0000025!5.20e-10!194;UBERON:0002050!7.32e-10!605;UBERON:0005423!7.32e-10!605;UBERON:0001869!1.20e-09!32;UBERON:0000923!1.45e-09!604;UBERON:0005291!1.45e-09!604;UBERON:0006598!1.45e-09!604;UBERON:0002532!1.45e-09!604;UBERON:0007023!1.42e-08!115;UBERON:0000062!4.12e-08!511;UBERON:0000064!9.93e-08!219;UBERON:0003076!1.13e-07!15;UBERON:0003057!1.13e-07!15;UBERON:0000956!1.90e-07!25;UBERON:0000203!1.90e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001016;3.70e-09;83!UBERON:0001017;8.84e-09;75!UBERON:0000073;1.37e-08;53!UBERON:0002616;1.37e-08;53!UBERON:0000955;1.94e-08;68!UBERON:0002791;2.56e-08;32!UBERON:0002680;3.05e-08;9!UBERON:0001895;3.05e-08;9!UBERON:0003528;3.29e-08;34!UBERON:0002020;3.29e-08;34!UBERON:0004733;1.92e-07;12!UBERON:0002028;1.92e-07;12!UBERON:0001869;3.90e-07;32!UBERON:0002619;4.51e-07;22!UBERON:0002780;5.30e-07;41!UBERON:0001890;5.30e-07;41!UBERON:0011135;7.40e-07;5!UBERON:0002216;7.40e-07;5!UBERON:0011134;7.40e-07;5!UBERON:0002209;7.40e-07;5!UBERON:0002213;7.40e-07;5!UBERON:0007844;7.40e-07;5!UBERON:0011138;7.40e-07;5!UBERON:0001130;7.40e-07;5!UBERON:0001066;7.40e-07;5!UBERON:0001468;7.40e-07;5!UBERON:0001893;7.79e-07;34!UBERON:0000956;7.93e-07;25!UBERON:0000203;7.93e-07;25 | |||
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| ||
|short_description=p9@LMNA | |short_description=p9@LMNA | ||
}} | }} |
Latest revision as of 14:39, 17 September 2015
Short description: | p9@LMNA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_LMNA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000368301, ENST00000502751, uc001fnf.1_5end |
EntrezGene: | LMNA |
HGNC: | 6636 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.06e-07 | 25 |