FFCP PHASE1:Hg19::chr7:18832801..18832816,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:18832801..18832816,+
|short_description=p21@HDAC9
|description=CAGE_peak_21_at_HDAC9_5end
|association_with_transcript=19bp_to_ENST00000490851,uc003suk.2_5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9734 | |EntrezGene=9734 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14065 | |HGNC=14065 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=19bp_to_ENST00000490851,uc003suk.2_5end | |||
|cluster_id=chr7:18832801..18832816,+ | |||
|description=CAGE_peak_21_at_HDAC9_5end | |||
|id=chr7:18832801..18832816,+ | |||
|ontology_enrichment_celltype=CL:0000197!2.00e-10!6;CL:0000098!2.00e-10!6;CL:0002167!2.00e-10!6;CL:0002602!8.57e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0000197;1.56e-31;6!CL:0000098;1.56e-31;6!CL:0002167;1.56e-31;6!CL:0002602;4.94e-25;2!CL:0000710;1.14e-09;20!CL:0000138;1.22e-08;6!CL:0000075;3.29e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,1.05e-31,6;CL:0000098,1.05e-31,6;CL:0002167,1.05e-31,6;CL:0002602,5.58e-25,2;CL:0000710,1.02e-09,20;CL:0000058,1.42e-08,6;CL:0000138,1.42e-08,6;CL:0000075,3.03e-07,27 | |||
|ontology_enrichment_development_v019=UBERON:0008801;3.33e-13;1!UBERON:0006965;4.42e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000165!1.46e-12!28;UBERON:0000930!1.46e-12!28;UBERON:0000166!8.71e-12!21;UBERON:0000078!3.10e-11!18;UBERON:0001444!9.99e-11!48;UBERON:0001044!3.52e-10!6;UBERON:0003293!3.52e-10!6;UBERON:0003294!3.52e-10!6;UBERON:0010047!3.52e-10!6;UBERON:0000167!3.52e-10!6;UBERON:0009568!8.57e-09!2;UBERON:0002216!8.57e-09!2;UBERON:0002209!8.57e-09!2;UBERON:0002213!8.57e-09!2;UBERON:0004267!8.57e-09!2;UBERON:0006444!8.57e-09!2;UBERON:0001995!8.57e-09!2;UBERON:0004715!8.57e-09!2;UBERON:0001468!8.57e-09!2;UBERON:0001130!8.57e-09!2;UBERON:0001066!8.57e-09!2;UBERON:0001829!1.66e-08!2;UBERON:0004089!1.85e-08!2;UBERON:0003127!3.18e-08!2;UBERON:0000341!4.86e-08!2;UBERON:0000161!6.19e-08!35;UBERON:0005174!2.73e-07!5;UBERON:0001137!2.73e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0006444;4.94e-25;2!UBERON:0001995;4.94e-25;2!UBERON:0004715;4.94e-25;2!UBERON:0011135;2.50e-22;5!UBERON:0002216;2.50e-22;5!UBERON:0011134;2.50e-22;5!UBERON:0002209;2.50e-22;5!UBERON:0002213;2.50e-22;5!UBERON:0007844;2.50e-22;5!UBERON:0011138;2.50e-22;5!UBERON:0001130;2.50e-22;5!UBERON:0001066;2.50e-22;5!UBERON:0001468;2.50e-22;5!UBERON:0002418;4.89e-17;3!UBERON:0004755;4.89e-17;3!UBERON:0004905;3.39e-14;8!UBERON:0000982;3.39e-14;8!UBERON:0004770;3.39e-14;8!UBERON:0001831;3.33e-13;1!UBERON:0001567;3.33e-13;1!UBERON:0001044;7.62e-09;6!UBERON:0003293;7.62e-09;6!UBERON:0003294;7.62e-09;6!UBERON:0010047;7.62e-09;6!UBERON:0003408;7.62e-09;6!UBERON:0000167;7.62e-09;6!UBERON:0001041;3.96e-08;14!UBERON:0000075;2.32e-07;16!UBERON:0001829;3.09e-07;2!UBERON:0004089;3.09e-07;2!UBERON:0003127;4.42e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006444,5.58e-25,2;UBERON:0001995,5.58e-25,2;UBERON:0004715,5.58e-25,2;UBERON:0011135,2.68e-22,5;UBERON:0002216,2.68e-22,5;UBERON:0011134,2.68e-22,5;UBERON:0002209,2.68e-22,5;UBERON:0002213,2.68e-22,5;UBERON:0005856,2.68e-22,5;UBERON:0005866,2.68e-22,5;UBERON:0005863,2.68e-22,5;UBERON:0007844,2.68e-22,5;UBERON:0011138,2.68e-22,5;UBERON:0001130,2.68e-22,5;UBERON:0001066,2.68e-22,5;UBERON:0001468,2.68e-22,5;UBERON:0002418,5.30e-17,3;UBERON:0004755,5.30e-17,3;UBERON:0004905,3.55e-14,8;UBERON:0000982,3.55e-14,8;UBERON:0004770,3.55e-14,8;UBERON:0001831,3.33e-13,1;UBERON:0001567,3.33e-13,1;UBERON:0008801,3.33e-13,1;UBERON:0001044,7.33e-09,6;UBERON:0003293,7.33e-09,6;UBERON:0003294,7.33e-09,6;UBERON:0010047,7.33e-09,6;UBERON:0000167,7.33e-09,6;UBERON:0000075,2.38e-07,16;UBERON:0001829,3.09e-07,2;UBERON:0004089,3.09e-07,2;UBERON:0003127,4.98e-07,2 | |||
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| ||
|short_description=p21@HDAC9 | |||
}} | }} |
Latest revision as of 14:35, 17 September 2015
Short description: | p21@HDAC9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_HDAC9_5end |
Coexpression cluster: | NA |
Association with transcript: | 19bp_to_ENST00000490851, uc003suk.2_5end |
EntrezGene: | HDAC9 |
HGNC: | 14065 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 1.05e-31 | 6 |
sensory epithelial cell | 1.05e-31 | 6 |
olfactory epithelial cell | 1.05e-31 | 6 |
annulus pulposus cell | 5.58e-25 | 2 |
neurecto-epithelial cell | 1.02e-09 | 20 |
chondroblast | 1.42e-08 | 6 |
chondrocyte | 1.42e-08 | 6 |
columnar/cuboidal epithelial cell | 3.03e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
annulus fibrosus | 5.58e-25 | 2 |
fibrocartilage | 5.58e-25 | 2 |
annulus fibrosus disci intervertebralis | 5.58e-25 | 2 |
intervertebral cartilage | 2.68e-22 | 5 |
symphysis | 2.68e-22 | 5 |
nonsynovial joint | 2.68e-22 | 5 |
fibrous joint | 2.68e-22 | 5 |
cartilaginous joint | 2.68e-22 | 5 |
developing mesenchymal condensation | 2.68e-22 | 5 |
pre-cartilage condensation | 2.68e-22 | 5 |
cartilaginous condensation | 2.68e-22 | 5 |
cartilage element | 2.68e-22 | 5 |
post-cranial axial skeletal system | 2.68e-22 | 5 |
vertebral column | 2.68e-22 | 5 |
intervertebral disk | 2.68e-22 | 5 |
intervertebral joint | 2.68e-22 | 5 |
cartilage tissue | 5.30e-17 | 3 |
skeletal tissue | 5.30e-17 | 3 |
articulation | 3.55e-14 | 8 |
skeletal joint | 3.55e-14 | 8 |
articular system | 3.55e-14 | 8 |
parotid gland | 3.33e-13 | 1 |
cheek | 3.33e-13 | 1 |
parotid gland primordium | 3.33e-13 | 1 |
saliva-secreting gland | 7.33e-09 | 6 |
gland of oral region | 7.33e-09 | 6 |
gland of foregut | 7.33e-09 | 6 |
oral gland | 7.33e-09 | 6 |
oral cavity | 7.33e-09 | 6 |
subdivision of skeletal system | 2.38e-07 | 16 |
major salivary gland | 3.09e-07 | 2 |
midface | 3.09e-07 | 2 |
open tracheal system trachea | 4.98e-07 | 2 |