FFCP PHASE1:Hg19::chr12:15114685..15114697,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:15114685..15114697,-
|short_description=p8@ARHGDIB
|description=CAGE_peak_8_at_ARHGDIB_5end
|association_with_transcript=-23bp_to_ENST00000542276_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=397 | |EntrezGene=397 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=679 | |HGNC=679 | ||
|TSSclassifier=strong | |||
|UniProt=F5H2R5 | |UniProt=F5H2R5 | ||
|association_with_transcript=-23bp_to_ENST00000542276_5end | |||
|cluster_id=chr12:15114685..15114697,- | |||
|coexpression_cluster_id=C3262 | |||
|description=CAGE_peak_8_at_ARHGDIB_5end | |||
|id=chr12:15114685..15114697,- | |||
|ontology_enrichment_celltype=CL:0000988!3.69e-20!182;CL:0000037!1.74e-19!172;CL:0000566!1.74e-19!172;CL:0002032!1.14e-17!165;CL:0000837!1.14e-17!165;CL:0000738!5.70e-16!140;CL:0000542!2.69e-15!53;CL:0000051!2.69e-15!53;CL:0002031!4.30e-15!124;CL:0002087!4.36e-15!119;CL:0000838!1.03e-14!52;CL:0000945!1.58e-10!24;CL:0000826!1.58e-10!24;CL:0000071!4.05e-08!18;CL:0002546!4.05e-08!18;CL:0002139!3.90e-07!24;CL:0000076!3.99e-07!62;CL:0000451!7.13e-07!10;CL:0000115!9.44e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0002159;1.28e-12;14!CL:0000071;2.76e-12;18!CL:0000945;1.50e-11;24!CL:0000115;3.08e-11;36!CL:0002139;4.54e-10;24!CL:1000413;1.16e-09;9!CL:0000840;3.50e-08;5!CL:0002544;3.50e-08;6!CL:0000451;1.09e-07;10!CL:0002621;2.10e-07;3!CL:0002543;2.74e-07;6!CL:0002166;5.31e-07;3!CL:0000076;8.40e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,1.19e-12,14;CL:0000071,2.36e-12,18;CL:0002546,2.36e-12,18;CL:0000115,5.23e-12,36;CL:0000945,1.78e-11,24;CL:0000826,1.78e-11,24;CL:0000542,5.04e-11,53;CL:0000051,5.04e-11,53;CL:0000076,9.26e-11,63;CL:0000838,3.63e-10,52;CL:0002139,5.27e-10,24;CL:0000988,6.37e-10,177;CL:1000413,1.08e-09,9;CL:0000037,6.56e-09,168;CL:0002078,1.06e-08,45;CL:0002032,1.84e-08,161;CL:0000837,1.84e-08,161;CL:0002544,2.49e-08,6;CL:0000840,2.65e-08,5;CL:0001029,2.65e-08,5;CL:0002031,4.78e-08,120;CL:0000738,5.87e-08,136;CL:0002087,5.96e-08,115;CL:0000451,9.51e-08,10;CL:0000213,1.55e-07,58;CL:0000215,1.55e-07,58;CL:0002543,2.43e-07,6;CL:0002621,2.50e-07,3;CL:0002166,4.24e-07,3;CL:0002328,8.53e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;2.76e-12;18 | |||
|ontology_enrichment_disease=DOID:2531!2.06e-09!51;DOID:0060083!2.06e-09!51;DOID:1240!6.70e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:0060058;8.84e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,6.76e-08,51;DOID:0060083,6.76e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0001986!4.05e-08!18;UBERON:0004638!4.05e-08!18;UBERON:0004852!4.05e-08!18;UBERON:0003081!4.27e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.76e-12;18!UBERON:0001986;2.76e-12;18!UBERON:0004852;2.76e-12;18!UBERON:0003915;1.16e-09;9!UBERON:0004700;1.16e-09;9!UBERON:0001917;1.16e-09;9!UBERON:0000487;1.55e-09;22!UBERON:0000490;3.77e-09;33!UBERON:0006914;4.60e-08;25!UBERON:0001949;2.10e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.36e-12,18;UBERON:0001986,2.36e-12,18;UBERON:0004852,2.36e-12,18;UBERON:0003915,1.08e-09,9;UBERON:0004700,1.08e-09,9;UBERON:0001917,1.08e-09,9;UBERON:0000487,1.37e-09,22;UBERON:0006914,4.13e-08,25;UBERON:0001949,2.50e-07,3;UBERON:0004815,8.53e-07,3;UBERON:0002031,8.53e-07,3;UBERON:0003081,8.67e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.96597234917155,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,5.34893840235659,6.15754420874593,6.37557328640802,0,1.15148819429164,0.309632246632152,1.83884244895785,2.409647350226,2.21852406100073,1.08454080812422,1.70603078984906,0.587200878669695,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0.309706370895104,0.28769239232215,0.256160706529101,0.236482229888585,0,0,0,0.188242339542605,0,0.449446968890169,0.306083892370903,0.320929027076094,0,0,0.598390972864896,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0.633765858935825,0.850417199860174,0.838634582033504,0.336985893439485,0.150176892841506,0.16072558669708,1.14005097496499,1.59133341759272,0.91332076882317,0,1.09227722252426,0.889509253863555,0.853460445133014,0,0,1.98313461835459,0,0.569212969109448,0.587237189370939,0.764546456250458,0,0.560508562981536,0.790152254325231,0.393419540227666,0.393010762749165,0,0.668745981562712,0.977766799900771,0,1.94826728407911,0.557052284425868,0.589211814949674,0.443067789167242,0.270803863765016,1.0247305578054,1.04047478047903,0.493313713811028,0.276350017785848,0,0.296573126324121,0.267540828089713,0,0.113309342697566,0,0.34362744548263,0.253019692019503,0,0,1.90090408889675,0.150575119077773,0.383959833463255,0,1.18388626022008,0.821127996921047,0.403213486449465,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5500670180478,4.07862887062872,2.27183175558278,2.96020553408754,1.86141144726411,1.43094374583205,1.71598473234038,1.11437250398869,1.98762407366705,0,2.42998351125316,1.13061588384802,1.25849830862972,1.37559020970034,0.835979866147242,1.03366703667732,0.35576626268671,0,0,0.760272105718513,0,2.57364156242108,2.43042584364528,1.07159673940896,1.79623498100936,0.450445921933289,1.53316637465883,1.89853131913626,1.28241220751285,0,0,0.436094052142534,0,0.25326102332916,0,0,1.06400514659507,0,0,0,0.622422070799533,0.134710672069688,1.14423332179421,0,0,0,0.312160076830321,0.570471821544449,0,0.469737994575059,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02088964844019,0,0,0,0,0.515262646192195,0,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0,4.05847791642923,2.18196896472668,3.72845974005705,0,0,0,0,0,0,1.56449532329816,0,1.38134921352481,0,0.721879481669586,0,0,0,0,0,0,0,0.196221465125346,0,2.21446636387394,1.40241773803446,0,0,0,0,0,0,0,0,2.08525542276389,1.1240175325762,2.81481122752566,0.833296006426766,0,0,0,0,0,0.288732895522148,0,0,0,0,0.246217006087397,4.68008530278475,1.93220510975347,4.68669169933885,1.6798212819886,3.1190521393325,0.806026704325635,0,0,0.492663237895943,0.528290604079356,0,0,0.37872730027914,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0.325736184293735,0,0.791951872933429,0,0,0,3.64871341923571,0.502257091432126,2.10833939483032,0,0,0,0,0,0,1.68127715990291,0.394061520403854,0.215627574859517,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.74709290462411,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,1.03850885836724,0.232420756919918,0,0.802025881213139,0.0920809889358963,0,0,0,0,0,0,0,0,2.27466768141793,1.19065593693561,1.51141141271498,0,0.270946437543853,0,0,0,0,0.877039506583738,1.8300481571743,0,0,0,0,0,0,1.14853107599234,1.95018073810956,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0,0,0,0,0.308033580176089,1.06461206063404,0,0.18532421910392,0.143124886741991,0,0,0.38126038784765,0,0,0,0,0,0,0,1.41527737101321,0,0,0,0,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0,0,0.6196469961995,0.281695602532241,0.286822704408103,0,0,0,0,0,0.379473173765715,0,2.69421915631434,2.68120910214315,0,0.0941438007767792,0,0,0.886860307073351,0,0.507447609232169,2.29391162142713,0,0.714695326373367,0,1.94541993357815,1.08006287447623,0,0,0,0.980160863924127,1.48642540100575,0.432807638929335,0.355709216742071,1.11598390910176,0.59873811429845,0.766021480529467,0.423347165447766,1.94773164164733,0,0,3.13359791546046,0,2.53937666702405,0.1605880751037,0.80719882876419,0.425846237690326,0.343505344755765,0.307240764308458,0.223676107892416,0.166849141711909,1.56310476321632,1.67043704337145,0,0,0,1.4098700508785,0,0.293016358543788,0,0.557216921387392,0,0,0.296964680832639,0.307160702099232,0,0,0,0,0,1.39473591775749,0,0,0,3.20020494198781,0,0.718946809178615,0,0,0.295930216910801,4.7896618469388,0,0,0.0927680981618513,0,0,0.262379999988587,0.724999575434793,1.82069517256799,0,0,0,0.874813840149763,0,0.885741385813839,0.120596438625408,0,0,0,0,0,0.697118721393016,0.384751292518985,0,0,0,0,0.638002319463839,0.0915975934018623,0,4.08773192782946,0.156980256395025,0.332423363800313,0,0,0,0,0.476809736941136,0,0,0,0,0,0.0884575645033392,0,1.48260564340311,1.97702302314405,2.92381458615275,0.134802265961354,0,0,0.729819156862664,0.978323094660449,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0.293977192243133,2.00236175134926,0,0,0,0,0,0.387956065953678,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,1.41416420770077,0,0,0,0,1.20084057741958,0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| ||
|short_description=p8@ARHGDIB | |||
}} | }} |
Latest revision as of 14:31, 17 September 2015
Short description: | p8@ARHGDIB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ARHGDIB_5end |
Coexpression cluster: | C3262_splenic_myeloma_Gingival_Mallassezderived_Corneal_B_Macrophage |
Association with transcript: | -23bp_to_ENST00000542276_5end |
EntrezGene: | ARHGDIB |
HGNC: | 679 |
UniProt: | F5H2R5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.36e-12 | 18 |
endothelium | 2.36e-12 | 18 |
cardiovascular system endothelium | 2.36e-12 | 18 |
endothelial tube | 1.08e-09 | 9 |
arterial system endothelium | 1.08e-09 | 9 |
endothelium of artery | 1.08e-09 | 9 |
simple squamous epithelium | 1.37e-09 | 22 |
squamous epithelium | 4.13e-08 | 25 |
gingival epithelium | 2.50e-07 | 3 |
lower respiratory tract epithelium | 8.53e-07 | 3 |
epithelium of bronchus | 8.53e-07 | 3 |
lateral plate mesoderm | 8.67e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.76e-08 | 51 |
immune system cancer | 6.76e-08 | 51 |