FFCP PHASE1:Hg19::chr3:195298223..195298244,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=347 | |EntrezGene=347 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=612 | |HGNC=612 | ||
|TSSclassifier=strong | |||
|UniProt=P05090 | |UniProt=P05090 | ||
|association_with_transcript=-15bp_to_S80440_5end | |association_with_transcript=-15bp_to_S80440_5end | ||
|cluster_id=chr3:195298223..195298244,- | |||
|coexpression_cluster_id=C771 | |||
|description=CAGE_peak_6_at_APOD_5end | |description=CAGE_peak_6_at_APOD_5end | ||
|id=chr3:195298223..195298244,- | |id=chr3:195298223..195298244,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.43e-11;82!UBERON:0006241;3.42e-08;3!UBERON:0003057;3.42e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.17e-80!115;UBERON:0001049!6.76e-33!57;UBERON:0005068!6.76e-33!57;UBERON:0006241!6.76e-33!57;UBERON:0007135!6.76e-33!57;UBERON:0002616!7.27e-31!59;UBERON:0001017!3.04e-27!82;UBERON:0000955!5.84e-27!69;UBERON:0006238!5.84e-27!69;UBERON:0005743!1.33e-26!86;UBERON:0003080!4.02e-25!42;UBERON:0002346!4.66e-24!90;UBERON:0002780!6.95e-24!41;UBERON:0001890!6.95e-24!41;UBERON:0006240!6.95e-24!41;UBERON:0003075!7.53e-24!86;UBERON:0007284!7.53e-24!86;UBERON:0000073!8.52e-24!94;UBERON:0001016!8.52e-24!94;UBERON:0000153!8.77e-20!129;UBERON:0007811!8.77e-20!129;UBERON:0002020!6.05e-19!34;UBERON:0003528!6.05e-19!34;UBERON:0000033!6.08e-19!123;UBERON:0001893!1.38e-18!34;UBERON:0000924!5.49e-18!173;UBERON:0006601!5.49e-18!173;UBERON:0002791!8.03e-18!33;UBERON:0004121!1.46e-17!169;UBERON:0001869!1.46e-16!32;UBERON:0003056!3.24e-15!61;UBERON:0002619!1.46e-12!22;UBERON:0002420!1.46e-11!9;UBERON:0007245!1.46e-11!9;UBERON:0010009!1.46e-11!9;UBERON:0010011!1.46e-11!9;UBERON:0000454!1.46e-11!9;UBERON:0002308!3.01e-11!9;UBERON:0000125!3.01e-11!9;UBERON:0002298!9.66e-11!8;UBERON:0000956!1.65e-10!25;UBERON:0000203!1.65e-10!25;UBERON:0001950!1.71e-10!20;UBERON:0000475!2.27e-10!365;UBERON:0004111!9.13e-10!241;UBERON:0000477!1.91e-09!286;UBERON:0009663!4.67e-09!7;UBERON:0003076!7.63e-09!15;UBERON:0003057!7.63e-09!15;UBERON:0000468!5.62e-08!659;UBERON:0000349!1.90e-07!5;UBERON:0001894!6.61e-07!7;UBERON:0006222!6.61e-07!7;UBERON:0000025!6.65e-07!194;UBERON:0004732!8.77e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.41e-17;114!UBERON:0003528;1.52e-16;34!UBERON:0002020;1.52e-16;34!UBERON:0002780;1.59e-16;41!UBERON:0001890;1.59e-16;41!UBERON:0002791;6.76e-16;32!UBERON:0001893;8.30e-16;34!UBERON:0002420;2.98e-15;9!UBERON:0007245;2.98e-15;9!UBERON:0010009;2.98e-15;9!UBERON:0010011;2.98e-15;9!UBERON:0000454;2.98e-15;9!UBERON:0000073;3.51e-15;53!UBERON:0002616;3.51e-15;53!UBERON:0000125;5.40e-15;9!UBERON:0002308;5.40e-15;9!UBERON:0001017;1.32e-14;75!UBERON:0001869;1.11e-13;32!UBERON:0000955;5.72e-13;68!UBERON:0002619;5.52e-12;22!UBERON:0009663;4.21e-11;7!UBERON:0000956;2.81e-10;25!UBERON:0000203;2.81e-10;25!UBERON:0001016;1.23e-09;83!UBERON:0002298;1.97e-09;6!UBERON:0001950;4.90e-09;20!UBERON:0001871;1.57e-08;6!UBERON:0000349;3.40e-08;5!UBERON:0002240;3.42e-08;3!UBERON:0005174;3.42e-08;3!UBERON:0001137;3.42e-08;3!UBERON:0006947;8.93e-08;3!UBERON:0004054;8.93e-08;3!UBERON:0001896;2.14e-07;3!UBERON:0005290;2.14e-07;3!UBERON:0005383;6.79e-07;3!UBERON:0005382;6.79e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.55e-75,114;UBERON:0001049,6.98e-31,56;UBERON:0005068,6.98e-31,56;UBERON:0006241,6.98e-31,56;UBERON:0007135,6.98e-31,56;UBERON:0001017,1.41e-28,81;UBERON:0001016,1.89e-26,89;UBERON:0000073,4.64e-26,53;UBERON:0002616,4.64e-26,53;UBERON:0000955,1.68e-25,68;UBERON:0006238,1.68e-25,68;UBERON:0002780,2.98e-23,41;UBERON:0001890,2.98e-23,41;UBERON:0003080,2.98e-23,41;UBERON:0006240,2.98e-23,41;UBERON:0003075,5.28e-23,82;UBERON:0007284,5.28e-23,82;UBERON:0002346,1.66e-21,86;UBERON:0003528,5.24e-21,34;UBERON:0002020,5.24e-21,34;UBERON:0010314,1.08e-20,132;UBERON:0010371,7.24e-19,104;UBERON:0001893,1.34e-18,34;UBERON:0004121,2.42e-18,171;UBERON:0000924,2.42e-18,171;UBERON:0006601,2.42e-18,171;UBERON:0002791,5.72e-18,32;UBERON:0003056,1.01e-16,61;UBERON:0001869,1.23e-15,32;UBERON:0002420,1.87e-15,9;UBERON:0007245,1.87e-15,9;UBERON:0010009,1.87e-15,9;UBERON:0010011,1.87e-15,9;UBERON:0000454,1.87e-15,9;UBERON:0000125,5.78e-15,9;UBERON:0002308,5.78e-15,9;UBERON:0002619,6.35e-12,22;UBERON:0011216,7.73e-12,223;UBERON:0009663,3.51e-11,7;UBERON:0000956,3.17e-10,25;UBERON:0000203,3.17e-10,25;UBERON:0004111,1.04e-09,240;UBERON:0002298,2.20e-09,6;UBERON:0001950,5.32e-09,20;UBERON:0003076,9.91e-09,15;UBERON:0003057,9.91e-09,15;UBERON:0001871,1.78e-08,6;UBERON:0000349,2.83e-08,5;UBERON:0002240,4.80e-08,3;UBERON:0005174,4.80e-08,3;UBERON:0001137,4.80e-08,3;UBERON:0006947,9.74e-08,3;UBERON:0004054,9.74e-08,3;UBERON:0001896,1.81e-07,3;UBERON:0005290,1.81e-07,3;UBERON:0010096,1.81e-07,3;UBERON:0000025,2.55e-07,192;UBERON:0005383,6.89e-07,3;UBERON:0005382,6.89e-07,3 | |||
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|short_description=p6@APOD | |short_description=p6@APOD | ||
}} | }} |
Latest revision as of 14:13, 17 September 2015
Short description: | p6@APOD |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_APOD_5end |
Coexpression cluster: | C771_left_Fibroblast_pineal_adipose_breast_retina_skeletal |
Association with transcript: | -15bp_to_S80440_5end |
EntrezGene: | APOD |
HGNC: | 612 |
UniProt: | P05090 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data