FFCP PHASE1:Hg19::chr11:30608413..30608423,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=744 | |EntrezGene=744 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1180 | |HGNC=1180 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z346 | |UniProt=F2Z346 | ||
|association_with_transcript=0bp_to_ENST00000528686_5end | |association_with_transcript=0bp_to_ENST00000528686_5end | ||
|cluster_id=chr11:30608413..30608423,- | |||
|coexpression_cluster_id=C3138 | |||
|description=CAGE_peak_17_at_MPPED2_5end | |description=CAGE_peak_17_at_MPPED2_5end | ||
|id=chr11:30608413..30608423,- | |id=chr11:30608413..30608423,- | ||
|ontology_enrichment_celltype=CL:0000047!3.47e-09!8;CL:0002319!6.42e-07!25 | |ontology_enrichment_celltype=CL:0000047!3.47e-09!8;CL:0002319!6.42e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:1001319;1.03e-17;1!CL:1000600;1.03e-17;1!CL:0000540;5.08e-12;6!CL:0000404;5.08e-12;6!CL:0000047;8.32e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.88e-19,8;CL:1001319,1.03e-17,1;CL:1000600,1.03e-17,1;CL:0000540,4.55e-12,6;CL:0000031,4.55e-12,6;CL:0000404,4.55e-12,6 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.03e-17;1!UBERON:0007123;4.39e-14;5!CL:0000031;5.08e-12;6!UBERON:0007297;1.57e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001874;1.03e-17;1!UBERON:0000998;1.03e-17;1!UBERON:0004645;1.03e-17;1!UBERON:0006868;1.03e-17;1!UBERON:0001256;1.03e-17;1!UBERON:0001259;1.03e-17;1!UBERON:0002046;4.39e-14;5!UBERON:0001255;1.57e-09;2!UBERON:0001556;1.57e-09;2!UBERON:0000922;2.68e-08;49!UBERON:0002791;3.39e-08;32!UBERON:0001950;9.18e-08;20!UBERON:0003528;1.76e-07;34!UBERON:0002020;1.76e-07;34!UBERON:0001869;1.78e-07;32!UBERON:0002619;3.91e-07;22!UBERON:0002114;6.88e-07;2!UBERON:0006947;9.11e-07;3!UBERON:0005383;9.11e-07;3!UBERON:0004054;9.11e-07;3!UBERON:0005382;9.11e-07;3!UBERON:0001893;9.53e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001874,8.72e-18,1;UBERON:0004645,1.03e-17,1;UBERON:0001256,1.03e-17,1;UBERON:0001259,1.03e-17,1;UBERON:0000998,1.22e-17,1;UBERON:0006868,1.22e-17,1;UBERON:0002046,4.69e-14,5;UBERON:0004117,4.69e-14,5;UBERON:0007689,4.69e-14,5;UBERON:0007123,4.69e-14,5;UBERON:0003091,4.69e-14,5;UBERON:0001255,1.57e-09,2;UBERON:0001556,1.57e-09,2;UBERON:0001017,1.93e-09,81;UBERON:0001016,1.79e-08,89;UBERON:0002791,2.30e-08,32;UBERON:0001869,2.30e-08,32;UBERON:0003528,6.68e-08,34;UBERON:0002020,6.68e-08,34;UBERON:0001893,6.68e-08,34;UBERON:0001950,9.51e-08,20;UBERON:0002619,4.04e-07,22;UBERON:0002114,6.88e-07,2;UBERON:0009722,6.94e-07,11;UBERON:0007690,6.94e-07,11;UBERON:0005383,8.62e-07,3;UBERON:0005382,8.62e-07,3;UBERON:0006947,9.64e-07,3;UBERON:0004054,9.64e-07,3 | |||
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| ||
|short_description=p17@MPPED2 | |short_description=p17@MPPED2 | ||
}} | }} |
Latest revision as of 14:03, 17 September 2015
Short description: | p17@MPPED2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_MPPED2_5end |
Coexpression cluster: | C3138_parietal_merkel_thyroid_occipital_temporal_transitionalcell_pharyngeal |
Association with transcript: | 0bp_to_ENST00000528686_5end |
EntrezGene: | MPPED2 |
HGNC: | 1180 |
UniProt: | F2Z346 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.88e-19 | 8 |
bladder cell | 1.03e-17 | 1 |
lower urinary tract cell | 1.03e-17 | 1 |
neuron | 4.55e-12 | 6 |
neuroblast | 4.55e-12 | 6 |
electrically signaling cell | 4.55e-12 | 6 |
Ontology term | p-value | n |
---|---|---|
putamen | 8.72e-18 | 1 |
urinary bladder urothelium | 1.03e-17 | 1 |
wall of urinary bladder | 1.03e-17 | 1 |
mucosa of urinary bladder | 1.03e-17 | 1 |
seminal vesicle | 1.22e-17 | 1 |
seminal fluid secreting gland | 1.22e-17 | 1 |
thyroid gland | 4.69e-14 | 5 |
pharyngeal pouch | 4.69e-14 | 5 |
thyroid diverticulum | 4.69e-14 | 5 |
pharyngeal pouch 2 | 4.69e-14 | 5 |
thyroid primordium | 4.69e-14 | 5 |
urinary bladder | 1.57e-09 | 2 |
lower urinary tract | 1.57e-09 | 2 |
central nervous system | 1.93e-09 | 81 |
nervous system | 1.79e-08 | 89 |
regional part of telencephalon | 2.30e-08 | 32 |
cerebral hemisphere | 2.30e-08 | 32 |
brain grey matter | 6.68e-08 | 34 |
gray matter | 6.68e-08 | 34 |
telencephalon | 6.68e-08 | 34 |
neocortex | 9.51e-08 | 20 |
regional part of cerebral cortex | 4.04e-07 | 22 |
duodenum | 6.88e-07 | 2 |
entire pharyngeal arch endoderm | 6.94e-07 | 11 |
early pharyngeal endoderm | 6.94e-07 | 11 |
caudate-putamen | 8.62e-07 | 3 |
dorsal striatum | 8.62e-07 | 3 |
male genital duct | 9.64e-07 | 3 |
internal male genitalia | 9.64e-07 | 3 |