FFCP PHASE1:Hg19::chr3:195163669..195163683,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:195163669..195163683,- to FFCP PHASE1:Hg19::chr3:195163669..195163683,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23527 | |EntrezGene=23527 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16469 | |HGNC=16469 | ||
|TSSclassifier=strong | |||
|UniProt=F8WAU0 | |UniProt=F8WAU0 | ||
|association_with_transcript=-35bp_to_ENST00000447662_5end | |||
|cluster_id=chr3:195163669..195163683,- | |||
|description=CAGE_peak_4_at_ACAP2_5end | |||
|id=chr3:195163669..195163683,- | |||
|ontology_enrichment_celltype=CL:0000860!2.87e-15!45;CL:0002057!3.04e-14!42;CL:0000766!1.95e-13!76;CL:0000763!2.04e-13!112;CL:0000049!2.04e-13!112;CL:0002009!3.40e-13!65;CL:0002194!3.12e-12!63;CL:0000576!3.12e-12!63;CL:0000040!3.12e-12!63;CL:0000559!3.12e-12!63;CL:0000557!9.66e-12!71;CL:0000839!1.51e-10!70;CL:0002032!1.02e-07!165;CL:0000837!1.02e-07!165;CL:0000037!3.02e-07!172;CL:0000566!3.02e-07!172;CL:0000738!9.25e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.28e-12;33!CL:0002057;9.28e-12;33!CL:0000576;8.72e-10;48!CL:0000473;3.14e-09;39!CL:0000234;3.14e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.51e-15,42;CL:0002057,7.51e-15,42;CL:0000473,8.77e-14,48;CL:0000234,8.77e-14,48;CL:0000766,1.77e-13,72;CL:0002009,2.86e-13,61;CL:0000763,7.86e-13,108;CL:0000049,7.86e-13,108;CL:0002194,2.93e-12,59;CL:0000576,2.93e-12,59;CL:0000040,2.93e-12,59;CL:0000559,2.93e-12,59;CL:0000557,1.05e-11,67;CL:0000839,1.87e-10,66;CL:0002032,1.80e-07,161;CL:0000837,1.80e-07,161;CL:0000037,6.12e-07,168;CL:0000738,8.74e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;1.13e-10;42 | |||
|ontology_enrichment_disease=DOID:14566!6.10e-10!239;DOID:162!9.96e-10!235;DOID:305!7.45e-09!106;DOID:0050687!7.73e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.00e-07,239;DOID:162,1.33e-07,235;DOID:305,1.88e-07,106;DOID:0050687,2.32e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.62e-11!102;UBERON:0003061!5.62e-11!102;UBERON:0001474!6.62e-10!86;UBERON:0002193!1.08e-09!112;UBERON:0002371!1.58e-09!80;UBERON:0007023!2.69e-08!115;UBERON:0004765!3.39e-07!101;UBERON:0001434!3.39e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.21e-11,98;UBERON:0003061,4.21e-11,98;UBERON:0001474,4.86e-10,82;UBERON:0002371,9.38e-10,76;UBERON:0002193,9.59e-10,108;UBERON:0007023,1.47e-08,114;UBERON:0002405,8.79e-08,93;UBERON:0004765,3.06e-07,90 | |||
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| ||
|short_description=p4@ACAP2 | |||
}} | }} |
Latest revision as of 13:51, 17 September 2015
Short description: | p4@ACAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ACAP2_5end |
Coexpression cluster: | NA |
Association with transcript: | -35bp_to_ENST00000447662_5end |
EntrezGene: | ACAP2 |
HGNC: | 16469 |
UniProt: | F8WAU0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.51e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.51e-15 | 42 |
defensive cell | 8.77e-14 | 48 |
phagocyte | 8.77e-14 | 48 |
myeloid leukocyte | 1.77e-13 | 72 |
macrophage dendritic cell progenitor | 2.86e-13 | 61 |
myeloid cell | 7.86e-13 | 108 |
common myeloid progenitor | 7.86e-13 | 108 |
monopoietic cell | 2.93e-12 | 59 |
monocyte | 2.93e-12 | 59 |
monoblast | 2.93e-12 | 59 |
promonocyte | 2.93e-12 | 59 |
granulocyte monocyte progenitor cell | 1.05e-11 | 67 |
myeloid lineage restricted progenitor cell | 1.87e-10 | 66 |
hematopoietic oligopotent progenitor cell | 1.80e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.80e-07 | 161 |
hematopoietic stem cell | 6.12e-07 | 168 |
leukocyte | 8.74e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.21e-11 | 98 |
blood island | 4.21e-11 | 98 |
bone element | 4.86e-10 | 82 |
bone marrow | 9.38e-10 | 76 |
hemolymphoid system | 9.59e-10 | 108 |
adult organism | 1.47e-08 | 114 |
immune system | 8.79e-08 | 93 |
skeletal element | 3.06e-07 | 90 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.00e-07 | 239 |
cancer | 1.33e-07 | 235 |
carcinoma | 1.88e-07 | 106 |
cell type cancer | 2.32e-07 | 143 |