FFCP PHASE1:Hg19::chr12:14956396..14956444,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:14956396..14956444,-
|short_description=p1@WBP11
|description=CAGE_peak_1_at_WBP11_5end
|association_with_transcript=0bp_to_ENST00000535328,ENST0000053757...") |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51729 | |EntrezGene=51729 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16461 | |HGNC=16461 | ||
|TSSclassifier=strong | |||
|UniProt=F5GXS9,F5H721,Q9Y2W2 | |UniProt=F5GXS9,F5H721,Q9Y2W2 | ||
|association_with_transcript=0bp_to_ENST00000535328,ENST00000537574,ENST00000543316,ENST00000544764,NM_016312,uc001rci.2_5end | |||
|cluster_id=chr12:14956396..14956444,- | |||
|description=CAGE_peak_1_at_WBP11_5end | |||
|id=chr12:14956396..14956444,- | |||
|ontology_enrichment_celltype=CL:0000738!3.12e-09!140;CL:0000037!1.03e-08!172;CL:0000566!1.03e-08!172;CL:0000988!1.44e-08!182;CL:0002032!3.00e-08!165;CL:0000837!3.00e-08!165 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.71e-09,136;CL:0000037,2.19e-08,168;CL:0000988,3.00e-08,177;CL:0002032,6.29e-08,161;CL:0000837,6.29e-08,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!7.61e-13!143;DOID:162!6.42e-11!235;DOID:305!1.13e-10!106;DOID:14566!2.40e-10!239;DOID:3095!4.70e-07!22;DOID:2994!4.70e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.55e-07;22!DOID:2994;4.55e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,7.61e-13,143;DOID:162,6.42e-11,235;DOID:305,1.13e-10,106;DOID:14566,2.40e-10,239;DOID:3095,4.70e-07,22;DOID:2994,4.70e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.51e-10!57;UBERON:0005068!1.51e-10!57;UBERON:0006241!1.51e-10!57;UBERON:0007135!1.51e-10!57;UBERON:0000073!1.14e-09!94;UBERON:0001016!1.14e-09!94;UBERON:0002780!1.69e-09!41;UBERON:0001890!1.69e-09!41;UBERON:0006240!1.69e-09!41;UBERON:0003080!2.30e-09!42;UBERON:0001017!2.99e-09!82;UBERON:0005743!4.15e-09!86;UBERON:0002346!2.46e-08!90;UBERON:0001893!3.12e-08!34;UBERON:0002020!3.67e-08!34;UBERON:0003528!3.67e-08!34;UBERON:0001869!4.86e-08!32;UBERON:0002791!5.06e-08!33;UBERON:0000955!5.28e-08!69;UBERON:0006238!5.28e-08!69;UBERON:0003075!6.79e-08!86;UBERON:0007284!6.79e-08!86;UBERON:0002616!1.56e-07!59;UBERON:0007023!1.59e-07!115;UBERON:0002619!7.79e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.04e-07;32!UBERON:0003528;3.47e-07;34!UBERON:0002020;3.47e-07;34!UBERON:0001893;3.79e-07;34!UBERON:0002791;4.44e-07;32!UBERON:0002780;5.17e-07;41!UBERON:0001890;5.17e-07;41!UBERON:0002619;7.87e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.18e-10,56;UBERON:0005068,1.18e-10,56;UBERON:0006241,1.18e-10,56;UBERON:0007135,1.18e-10,56;UBERON:0000073,7.17e-10,53;UBERON:0002616,7.17e-10,53;UBERON:0001016,7.54e-10,89;UBERON:0002780,1.69e-09,41;UBERON:0001890,1.69e-09,41;UBERON:0003080,1.69e-09,41;UBERON:0006240,1.69e-09,41;UBERON:0001017,2.65e-09,81;UBERON:0001893,3.12e-08,34;UBERON:0003528,3.67e-08,34;UBERON:0002020,3.67e-08,34;UBERON:0000955,4.67e-08,68;UBERON:0006238,4.67e-08,68;UBERON:0001869,4.86e-08,32;UBERON:0002791,7.91e-08,32;UBERON:0002346,1.29e-07,86;UBERON:0007023,2.71e-07,114;UBERON:0003075,3.50e-07,82;UBERON:0007284,3.50e-07,82;UBERON:0002619,7.79e-07,22 | |||
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| ||
|short_description=p1@WBP11 | |||
}} | }} |
Latest revision as of 13:44, 17 September 2015
Short description: | p1@WBP11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_WBP11_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000535328, ENST00000537574, ENST00000543316, ENST00000544764, NM_016312, uc001rci.2_5end |
EntrezGene: | WBP11 |
HGNC: | 16461 |
UniProt: | F5GXS9F5H721Q9Y2W2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 6.71e-09 | 136 |
hematopoietic stem cell | 2.19e-08 | 168 |
hematopoietic cell | 3.00e-08 | 177 |
hematopoietic oligopotent progenitor cell | 6.29e-08 | 161 |
hematopoietic multipotent progenitor cell | 6.29e-08 | 161 |
Ontology term | p-value | n |
---|---|---|
neural tube | 1.18e-10 | 56 |
neural rod | 1.18e-10 | 56 |
future spinal cord | 1.18e-10 | 56 |
neural keel | 1.18e-10 | 56 |
regional part of nervous system | 7.17e-10 | 53 |
regional part of brain | 7.17e-10 | 53 |
nervous system | 7.54e-10 | 89 |
regional part of forebrain | 1.69e-09 | 41 |
forebrain | 1.69e-09 | 41 |
anterior neural tube | 1.69e-09 | 41 |
future forebrain | 1.69e-09 | 41 |
central nervous system | 2.65e-09 | 81 |
telencephalon | 3.12e-08 | 34 |
brain grey matter | 3.67e-08 | 34 |
gray matter | 3.67e-08 | 34 |
brain | 4.67e-08 | 68 |
future brain | 4.67e-08 | 68 |
cerebral hemisphere | 4.86e-08 | 32 |
regional part of telencephalon | 7.91e-08 | 32 |
neurectoderm | 1.29e-07 | 86 |
adult organism | 2.71e-07 | 114 |
neural plate | 3.50e-07 | 82 |
presumptive neural plate | 3.50e-07 | 82 |
regional part of cerebral cortex | 7.79e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 7.61e-13 | 143 |
cancer | 6.42e-11 | 235 |
carcinoma | 1.13e-10 | 106 |
disease of cellular proliferation | 2.40e-10 | 239 |
germ cell and embryonal cancer | 4.70e-07 | 22 |
germ cell cancer | 4.70e-07 | 22 |