FFCP PHASE1:Hg19::chr1:32138785..32138796,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1307 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2193 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=30bp_to_ENST00000479100_5end | |||
|cluster_id=chr1:32138785..32138796,- | |||
|coexpression_cluster_id=C480 | |||
|description=CAGE_peak_18_at_COL16A1_5end | |||
|id=chr1:32138785..32138796,- | |||
|ontology_enrichment_celltype=CL:0000188!4.78e-10!9;CL:0002575!1.87e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002575;3.11e-21;2!CL:0000632;1.83e-14;3!CL:0000669;2.53e-11;4!CL:0000333;3.22e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,3.11e-21,2;CL:0000632,2.09e-14,3;CL:0000669,2.53e-11,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;6.78e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,6.78e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.51e-15!115;UBERON:0000341!1.50e-08!2;UBERON:0001905!1.80e-08!2;UBERON:0002757!1.80e-08!2;UBERON:0010134!1.80e-08!2;UBERON:0002784!1.80e-08!2;UBERON:0005408!1.80e-08!2;UBERON:0001899!1.80e-08!2;UBERON:0002360!1.08e-07!2;UBERON:0000094!1.08e-07!2;UBERON:0007645!1.08e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002426;2.21e-40;1!UBERON:0003831;2.21e-40;1!UBERON:0003898;2.21e-40;1!UBERON:0004830;2.21e-40;1!UBERON:0003830;2.21e-40;1!UBERON:0005175;2.21e-40;1!UBERON:0001774;2.21e-40;1!UBERON:0001103;2.21e-40;1!UBERON:0005090;5.69e-21;2!UBERON:0001630;5.69e-21;2!UBERON:0001134;6.14e-11;16!UBERON:0002036;6.14e-11;16!UBERON:0000013;3.22e-09;5!UBERON:0002410;3.22e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,1.48e-40,1;UBERON:0003831,1.48e-40,1;UBERON:0003898,1.48e-40,1;UBERON:0004830,1.48e-40,1;UBERON:0003830,1.48e-40,1;UBERON:0005175,1.48e-40,1;UBERON:0001774,1.48e-40,1;UBERON:0001103,1.48e-40,1;UBERON:0010084,1.48e-40,1;UBERON:0005090,4.66e-21,2;UBERON:0001630,4.66e-21,2;UBERON:0000013,3.22e-09,5;UBERON:0002410,3.22e-09,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,13.0394501048125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386682873168488,0,0.15350367472613,0.413509717453592,0,0,0.340906509664404,8.1019152438531,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0,0.553394539744923,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53473245564382,0.107824811396682,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0.535701835878287,0.336283722218824,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0.632054446930906,0,0.173858272302579,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0.795803100645473,0,0,0.989464650708862,0,0.0771741581079447,0,0,0.490296643507811,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0.476128862927481,0,0,0,0,0.202117188958219,0.653150243690884,0,0,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p18@COL16A1 | |||
}} |
Latest revision as of 13:42, 17 September 2015
Short description: | p18@COL16A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_COL16A1_5end |
Coexpression cluster: | C480_Pericytes_Skeletal_skeletal_mesenchymal_Hepatic_diaphragm_tongue |
Association with transcript: | 30bp_to_ENST00000479100_5end |
EntrezGene: | COL16A1 |
HGNC: | 2193 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 3.11e-21 | 2 |
hepatic stellate cell | 2.09e-14 | 3 |
pericyte cell | 2.53e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 1.48e-40 | 1 |
respiratory system muscle | 1.48e-40 | 1 |
skeletal muscle of trunk | 1.48e-40 | 1 |
respiratory system skeletal muscle | 1.48e-40 | 1 |
thoracic segment muscle | 1.48e-40 | 1 |
chest organ | 1.48e-40 | 1 |
muscle of trunk | 1.48e-40 | 1 |
diaphragm | 1.48e-40 | 1 |
future diaphragm | 1.48e-40 | 1 |
muscle structure | 4.66e-21 | 2 |
muscle organ | 4.66e-21 | 2 |
sympathetic nervous system | 3.22e-09 | 5 |
autonomic nervous system | 3.22e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 6.78e-08 | 6 |