FFCP PHASE1:Hg19::chr15:40987349..40987397,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:40987349..40987397,+ to FFCP PHASE1:Hg19::chr15:40987349..40987397,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5888 | |EntrezGene=5888 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9817 | |HGNC=9817 | ||
|TSSclassifier=strong | |||
|UniProt=Q06609,Q6ZNA8,E9PJ30 | |UniProt=Q06609,Q6ZNA8,E9PJ30 | ||
|association_with_transcript=0bp_to_ENST00000267868,ENST00000382643,ENST00000525066,ENST00000532743,ENST00000557850,NM_001164269,uc001zml.3_5end | |||
|cluster_id=chr15:40987349..40987397,+ | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_1_at_RAD51_5end | |||
|id=chr15:40987349..40987397,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.42e-18!254;CL:0000548!3.85e-18!679;CL:0000004!3.85e-18!679;CL:0000255!3.85e-18!679;CL:0000012!5.39e-18!682;CL:0000003!3.30e-11!722;CL:0002321!3.59e-10!248;CL:0000220!1.45e-09!246;CL:0000063!6.11e-09!578;CL:0000144!4.81e-07!625 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.23e-18,253;CL:0002321,4.35e-09,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.05e-41!235;DOID:14566!1.03e-39!239;DOID:2531!9.73e-23!51;DOID:0060083!9.73e-23!51;DOID:0050686!2.00e-21!137;DOID:1240!1.61e-20!39;DOID:0050687!1.17e-19!143;DOID:8692!1.68e-16!31;DOID:305!9.02e-16!106 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.29e-16;39!DOID:8692;1.50e-16;31!DOID:2531;8.82e-15;51!DOID:0060083;8.82e-15;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.10e-41,235;DOID:14566,1.93e-39,239;DOID:2531,2.12e-23,51;DOID:0060083,2.12e-23,51;DOID:0050686,2.39e-21,137;DOID:1240,4.12e-21,39;DOID:0050687,8.62e-19,143;DOID:8692,5.74e-17,31;DOID:305,1.46e-15,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.363356758541113,1.92690471501885,0.986680828671798,0,0.446961094427288,0.872338524100369,5.06599756336621,0,0.522371256399677,4.91467873003018,10.4670175195864,9.61142037372758,3.16520373874144,0.123766352960047,0.662794751455832,2.01697543935533,0.602694528023977,0.730310090387373,0.975865597581014,6.1560529038394,6.32402142857184,0.626909442956176,7.44213566540748,13.5505680822155,15.4417446701607,14.9770275265984,17.8979285000882,18.5757443900283,0,0,0,10.1136334692682,9.0361775633475,2.9580320813343,7.90165445919077,13.506077086305,10.2760153767197,0.553995408531877,0.401088894940283,0.434021741431704,0.223915474239924,0.971680998056939,0.77272670290256,0,0,0,0.232429036905685,0,0.309706370895104,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0.212604299965044,0,0.112328631146495,0,0.16072558669708,0.285012743741249,0.19891667719909,0,0,0,0.889509253863555,0.853460445133014,0.800791974072025,0,0.661044872784862,0.954053754535364,0.569212969109448,0.587237189370939,0.382273228125229,0,0.560508562981536,12.6424360692037,0.590129310341499,1.17903228824749,0.411202997999018,3.00935691703221,0.32592226663359,0.473447805734733,0,3.7879555340959,0.294605907474837,1.99380505125259,1.08321545506006,6.27647466655808,6.11278933531428,8.38633313478748,15.4756009960075,8.40428948631652,0.14828656316206,0,0,9.17805675850286,0,0.34362744548263,1.51811815211702,0.637130828648193,1.30216690771284,0,1.05402583354441,0.383959833463255,1.24930726552346,0,0,0.604820229674197,1.33720097891754,0.144824403882799,0,3.35350429851818,5.4980901592718,9.75885711438329,0.50133791063589,2.02785126545153,4.7717156823066,0.973269740605272,6.05022829850034,3.54767035940102,3.68906099911129,3.47094550068939,3.64295288292542,8.52804218404188,0.324547393654683,0.348259474598534,0.531831842075461,0.476981248610684,0,0,10.136882775702,4.30117297553062,11.4556365530506,6.21838736116411,6.71199097935849,7.97842321626196,12.121708059135,1.8089173141853,2.13459757612026,3.01248551488203,2.81980521976403,4.56163263431108,4.88124115096339,4.77962004449629,4.0507097394088,8.92997282840798,15.2679973385795,17.2295565139483,12.2653309972707,9.49265659568129,6.22885929363385,0,0,1.74437620857014,0.496971951695318,4.68532893158945,0.529636723252875,4.01571269048339,4.25602058638028,9.53151920241922,11.7423895302675,1.48000529050296,2.8008993185979,3.77189881795127,11.6057951210556,1.66493170409425,1.72852777344,0.937285727335186,1.87296046098192,7.98660550162229,2.39117888882882,12.9177948508141,16.6729132699175,21.2080718120395,2.44985005505872,10.9322542407473,0.619954687054593,1.18800285728205,2.71993622206413,1.82032272387605,0,12.1202002046928,18.0170668615628,4.43302584774693,3.95079858792754,5.51678032438235,4.95785594391769,16.447666558203,12.1984952268426,1.2813443329114,2.11931901159562,9.90300617078528,2.98852334791473,1.8034837803194,1.67505170698431,10.801685263441,4.28722822709274,8.33031455005578,1.10459878370759,1.2931684545505,3.19508633264953,4.93685281315437,7.96934783859292,2.31913023795956,3.54569956768085,2.86804595389004,16.9543451520138,21.8674117730451,14.5242428586898,11.6100381617215,18.1671012630452,20.0737547491706,4.69348596989448,3.21620469096443,12.4321429217232,1.39310378409594,0,11.357452803825,12.4752670657795,10.1224632551062,11.5808671369014,11.7654899809899,14.710778384888,11.7303238099343,13.7355025587742,11.9271618653381,3.69077727312324,5.60967095213783,4.115740113314,1.47008711385542,0,0,1.18157981336281,43.7048468420504,6.51838724278502,2.40194934417936,1.20725313949488,5.62008766288098,10.7566000480445,5.27754137403619,0.651616610620649,4.15973914111831,1.44331342025273,3.36198174427723,1.29149563659404,7.36268883581476,11.5746378144153,7.22965778491473,12.6432703673484,6.86788929675898,4.18568910348575,4.91408956792399,7.13429578985896,0.93733833986777,3.69560682037491,4.67857820899875,6.98556477082217,8.13775027839093,12.651628412452,3.94130590316755,3.87413109658195,0.414656231081544,0.288239906833923,0.50496973370552,19.2398619705272,6.875791660049,9.37739577680376,17.1072446022705,25.1927357123143,15.3174959500398,2.85826432630578,7.06425831375773,7.41132117016576,19.4346457425518,0.517086863031111,0,11.834238535784,1.32969058292435,2.08014873822732,5.91576960802927,12.766421882095,6.12771011737029,1.14382394926518,0,7.40916303102692,11.7265026345745,1.77695974371273,16.630989331602,0,2.61460037580088,0.899756920638513,0,1.50677127429638,0,2.15662369942424,0,8.5582143024431,5.06734573336527,4.52047909610843,6.44619467663624,24.8829019665631,0.394061520403854,0.646882724578552,0.77005821767849,1.77866236955724,1.30139853857622,5.41302168944387,2.34522771468088,4.46557126157214,0,0,0,0.24538298343828,1.50051156317903,1.35632511849868,0.623912584592421,2.67643483195743,1.73472656537328,3.27995961979597,0.601892199455438,0,1.03473071292505,5.97803038681893,9.40282759562686,3.82287903659565,0.391602314925481,0.343143423810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| ||
|short_description=p1@RAD51 | |||
}} | }} |
Latest revision as of 13:35, 17 September 2015
Short description: | p1@RAD51 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RAD51_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000267868, ENST00000382643, ENST00000525066, ENST00000532743, ENST00000557850, NM_001164269, uc001zml.3_5end |
EntrezGene: | RAD51 |
HGNC: | 9817 |
UniProt: | Q06609Q6ZNA8E9PJ30 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.23e-18 | 253 |
embryonic cell | 4.35e-09 | 250 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.10e-41 | 235 |
disease of cellular proliferation | 1.93e-39 | 239 |
hematologic cancer | 2.12e-23 | 51 |
immune system cancer | 2.12e-23 | 51 |
organ system cancer | 2.39e-21 | 137 |
leukemia | 4.12e-21 | 39 |
cell type cancer | 8.62e-19 | 143 |
myeloid leukemia | 5.74e-17 | 31 |
carcinoma | 1.46e-15 | 106 |