FFCP PHASE1:Hg19::chr15:40942337..40942379,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57082 | |EntrezGene=57082 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24054 | |HGNC=24054 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=12bp_to_ENST00000532347_5end | |association_with_transcript=12bp_to_ENST00000532347_5end | ||
|cluster_id=chr15:40942337..40942379,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_4_at_CASC5_5end | |description=CAGE_peak_4_at_CASC5_5end | ||
|id=chr15:40942337..40942379,+ | |id=chr15:40942337..40942379,+ | ||
|ontology_enrichment_celltype=CL:0000181!8.05e-15!12;CL:0000417!8.05e-15!12;CL:0000668!8.05e-15!12;CL:0000414!8.05e-15!12;CL:0000412!8.05e-15!12;CL:0000182!8.05e-15!12;CL:0000945!2.80e-12!24;CL:0000826!2.80e-12!24 | |ontology_enrichment_celltype=CL:0000181!8.05e-15!12;CL:0000417!8.05e-15!12;CL:0000668!8.05e-15!12;CL:0000414!8.05e-15!12;CL:0000412!8.05e-15!12;CL:0000182!8.05e-15!12;CL:0000945!2.80e-12!24;CL:0000826!2.80e-12!24 | ||
|ontology_enrichment_celltype_v019=CL:0000182;6.28e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.48e-10,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.06e-18;11!UBERON:0009497;1.74e-15;13!UBERON:0003104;5.77e-10;31!UBERON:0001041;7.70e-07;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!1.46e-16!23;UBERON:0002107!3.29e-16!19;UBERON:0006925!3.29e-16!19;UBERON:0008836!3.29e-16!19;UBERON:0009497!4.49e-15!25;UBERON:0000015!4.49e-15!25;UBERON:0002423!4.49e-15!25;UBERON:0006235!4.49e-15!25;UBERON:0004161!4.49e-15!25;UBERON:0009856!1.80e-14!26;UBERON:0008835!7.94e-14!22;UBERON:0003894!7.94e-14!22;UBERON:0007499!5.13e-12!25;UBERON:0005057!1.66e-11!26;UBERON:0005172!6.20e-11!55;UBERON:0005173!6.20e-11!55;UBERON:0002417!1.27e-09!61;UBERON:0000916!1.27e-09!61;UBERON:0002365!1.90e-09!31;UBERON:0002330!1.90e-09!31;UBERON:0003929!2.81e-09!54;UBERON:0002368!3.17e-08!35;UBERON:0000160!4.24e-08!27;UBERON:0000949!1.15e-07!45;UBERON:0004921!1.39e-07!129;UBERON:0004185!1.39e-07!129 | |ontology_enrichment_uberon=UBERON:0009854!1.46e-16!23;UBERON:0002107!3.29e-16!19;UBERON:0006925!3.29e-16!19;UBERON:0008836!3.29e-16!19;UBERON:0009497!4.49e-15!25;UBERON:0000015!4.49e-15!25;UBERON:0002423!4.49e-15!25;UBERON:0006235!4.49e-15!25;UBERON:0004161!4.49e-15!25;UBERON:0009856!1.80e-14!26;UBERON:0008835!7.94e-14!22;UBERON:0003894!7.94e-14!22;UBERON:0007499!5.13e-12!25;UBERON:0005057!1.66e-11!26;UBERON:0005172!6.20e-11!55;UBERON:0005173!6.20e-11!55;UBERON:0002417!1.27e-09!61;UBERON:0000916!1.27e-09!61;UBERON:0002365!1.90e-09!31;UBERON:0002330!1.90e-09!31;UBERON:0003929!2.81e-09!54;UBERON:0002368!3.17e-08!35;UBERON:0000160!4.24e-08!27;UBERON:0000949!1.15e-07!45;UBERON:0004921!1.39e-07!129;UBERON:0004185!1.39e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.51e-16;19!UBERON:0006925;2.51e-16;19!UBERON:0002423;2.09e-12;25!UBERON:0000160;1.97e-11;17!UBERON:0002108;5.03e-11;4!UBERON:0002365;5.55e-10;31!UBERON:0002330;5.55e-10;31!UBERON:0005409;5.37e-09;22!UBERON:0002368;5.20e-08;33!UBERON:0001007;5.57e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.32e-16,19;UBERON:0006925,2.32e-16,19;UBERON:0008836,2.32e-16,19;UBERON:0008835,3.95e-14,22;UBERON:0003894,3.95e-14,22;UBERON:0009854,1.63e-13,23;UBERON:0007499,1.97e-12,25;UBERON:0009497,1.97e-12,25;UBERON:0000015,1.97e-12,25;UBERON:0002423,1.97e-12,25;UBERON:0006235,1.97e-12,25;UBERON:0004161,1.97e-12,25;UBERON:0009856,5.95e-12,26;UBERON:0000160,2.13e-11,17;UBERON:0002108,4.79e-11,4;UBERON:0002365,5.14e-10,31;UBERON:0002330,5.14e-10,31;UBERON:0002368,7.33e-09,35;UBERON:0005172,5.31e-08,54;UBERON:0005173,5.31e-08,54;UBERON:0005409,5.89e-08,25;UBERON:0003929,6.13e-08,54;UBERON:0004921,1.84e-07,118;UBERON:0002417,3.66e-07,60;UBERON:0000916,3.66e-07,60;UBERON:0000949,7.21e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.985207073399349,0.708397031823113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,1.20118796110804,0,0,1.90810750907073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63723844372141,0,0,0.649094787309367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60530208930985,0,0.590789906681404,0,1.10689594688802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16386124460217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2594512186427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.93421401483726,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,1.41809728153003,0.576911008668165,1.41547442093788,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,2.60058834087354,0.891727998294968,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61207457045891,2.65013777824443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,16.3609215188843,1.5299169235277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.985207073399349,0.708397031823113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,1.20118796110804,0,0,1.90810750907073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63723844372141,0,0,0.649094787309367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60530208930985,0,0.590789906681404,0,1.10689594688802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16386124460217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2594512186427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.93421401483726,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,1.41809728153003,0.576911008668165,1.41547442093788,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,2.60058834087354,0.891727998294968,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61207457045891,2.65013777824443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,16.3609215188843,1.5299169235277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p4@CASC5 | |short_description=p4@CASC5 | ||
}} | }} |
Latest revision as of 13:33, 17 September 2015
Short description: | p4@CASC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CASC5_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 12bp_to_ENST00000532347_5end |
EntrezGene: | CASC5 |
HGNC: | 24054 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.48e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.32e-16 | 19 |
digestive gland | 2.32e-16 | 19 |
liver bud | 2.32e-16 | 19 |
hepatic diverticulum | 3.95e-14 | 22 |
liver primordium | 3.95e-14 | 22 |
digestive tract diverticulum | 1.63e-13 | 23 |
epithelial sac | 1.97e-12 | 25 |
epithelium of foregut-midgut junction | 1.97e-12 | 25 |
anatomical boundary | 1.97e-12 | 25 |
hepatobiliary system | 1.97e-12 | 25 |
foregut-midgut junction | 1.97e-12 | 25 |
septum transversum | 1.97e-12 | 25 |
sac | 5.95e-12 | 26 |
intestine | 2.13e-11 | 17 |
small intestine | 4.79e-11 | 4 |
exocrine gland | 5.14e-10 | 31 |
exocrine system | 5.14e-10 | 31 |
endocrine gland | 7.33e-09 | 35 |
abdomen element | 5.31e-08 | 54 |
abdominal segment element | 5.31e-08 | 54 |
gastrointestinal system | 5.89e-08 | 25 |
gut epithelium | 6.13e-08 | 54 |
subdivision of digestive tract | 1.84e-07 | 118 |
abdominal segment of trunk | 3.66e-07 | 60 |
abdomen | 3.66e-07 | 60 |
endocrine system | 7.21e-07 | 45 |