FFCP PHASE1:Hg19::chr11:2950642..2950658,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:2950642..2950658,-
|short_description=p1@PHLDA2
|description=CAGE_peak_1_at_PHLDA2_5end
|association_with_transcript=0bp_to_NM_003311,uc001lxa.1_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7262 | |EntrezGene=7262 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12385 | |HGNC=12385 | ||
|TSSclassifier=strong | |||
|UniProt=Q53GA4 | |UniProt=Q53GA4 | ||
|association_with_transcript=0bp_to_NM_003311,uc001lxa.1_5end | |||
|cluster_id=chr11:2950642..2950658,- | |||
|description=CAGE_peak_1_at_PHLDA2_5end | |||
|id=chr11:2950642..2950658,- | |||
|ontology_enrichment_celltype=CL:0000548!2.65e-36!679;CL:0000004!2.65e-36!679;CL:0000255!2.65e-36!679;CL:0000012!2.55e-35!682;CL:0000066!4.09e-26!254;CL:0000220!7.25e-26!246;CL:0002321!1.49e-25!248;CL:0000144!1.79e-22!625;CL:0002371!3.71e-22!591;CL:0000003!6.16e-20!722;CL:0000222!5.23e-15!119;CL:0000063!1.42e-14!578;CL:0000183!3.91e-14!59;CL:0000055!1.30e-13!180;CL:0000192!2.55e-13!42;CL:0000514!2.55e-13!42;CL:0000680!2.95e-12!57;CL:0000056!2.95e-12!57;CL:0000355!2.95e-12!57;CL:0000187!4.78e-12!54;CL:0000359!9.72e-11!32;CL:0000393!1.23e-09!60;CL:0000211!1.23e-09!60;CL:0002077!9.55e-09!33;CL:0002076!1.84e-08!43;CL:1000449!5.18e-08!16;CL:0000075!2.78e-07!27;CL:1000497!5.56e-07!18;CL:0002518!5.56e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.61e-10;32!CL:0000192;1.92e-09;43!CL:1000449;3.14e-08;15!CL:0002077;5.23e-08;34!CL:0000075;2.72e-07;27!CL:1000497;4.00e-07;17!CL:0002518;4.00e-07;17!CL:0000187;6.99e-07;55!CL:0002681;7.43e-07;12!CL:0002584;7.43e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.07e-26,253;CL:0002321,1.08e-25,250;CL:0000222,4.81e-15,121;CL:0000192,3.07e-13,43;CL:0000514,3.07e-13,43;CL:0000680,3.10e-12,58;CL:0000056,3.10e-12,58;CL:0000355,3.10e-12,58;CL:0000187,5.08e-12,55;CL:0000359,9.50e-11,32;CL:0000393,1.22e-09,61;CL:0000211,1.22e-09,61;CL:0002077,7.15e-09,34;CL:0002076,2.84e-08,42;CL:1000449,3.16e-08,15;CL:0000075,2.74e-07,27;CL:1000497,4.08e-07,17;CL:0002518,4.08e-07,17;CL:0002681,7.43e-07,12;CL:0002584,7.43e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;1.92e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!2.79e-16!448;UBERON:0004120!2.79e-16!448;UBERON:0006603!2.79e-16!448;UBERON:0005256!5.94e-16!143;UBERON:0000486!3.72e-14!82;UBERON:0003104!1.69e-13!238;UBERON:0009142!1.69e-13!238;UBERON:0002100!1.75e-13!216;UBERON:0000914!4.37e-13!83;UBERON:0002329!4.37e-13!83;UBERON:0003077!4.37e-13!83;UBERON:0003059!4.37e-13!83;UBERON:0007282!4.37e-13!83;UBERON:0009618!4.37e-13!83;UBERON:0007285!4.37e-13!83;UBERON:0000467!5.03e-13!625;UBERON:0000480!9.29e-13!626;UBERON:0002049!1.40e-12!79;UBERON:0007798!1.40e-12!79;UBERON:0004290!3.27e-12!70;UBERON:0000468!3.79e-12!659;UBERON:0000923!9.97e-12!604;UBERON:0005291!9.97e-12!604;UBERON:0006598!9.97e-12!604;UBERON:0002532!9.97e-12!604;UBERON:0002050!1.40e-11!605;UBERON:0005423!1.40e-11!605;UBERON:0003914!1.91e-11!118;UBERON:0000490!3.94e-11!138;UBERON:0000922!5.25e-11!612;UBERON:0001134!7.03e-10!61;UBERON:0002036!7.03e-10!61;UBERON:0003082!7.03e-10!61;UBERON:0001637!2.03e-09!42;UBERON:0003509!2.03e-09!42;UBERON:0004572!2.03e-09!42;UBERON:0002385!3.13e-09!63;UBERON:0001015!3.13e-09!63;UBERON:0000383!3.13e-09!63;UBERON:0001981!5.60e-09!60;UBERON:0007500!5.60e-09!60;UBERON:0004537!5.60e-09!60;UBERON:0006965!5.60e-09!60;UBERON:0000055!7.82e-09!69;UBERON:0004211!5.18e-08!16;UBERON:0001285!5.18e-08!16;UBERON:0007684!5.18e-08!16;UBERON:0003220!5.18e-08!16;UBERON:0004208!5.18e-08!16;UBERON:0000119!6.01e-08!312;UBERON:0000481!7.28e-08!347;UBERON:0005085!1.11e-07!29;UBERON:0004872!1.21e-07!84;UBERON:0004535!1.52e-07!110;UBERON:0006555!2.08e-07!17;UBERON:0005103!2.08e-07!17;UBERON:0000083!2.08e-07!17;UBERON:0009201!2.08e-07!17;UBERON:0004819!2.08e-07!17;UBERON:0006553!2.08e-07!17;UBERON:0003074!2.08e-07!17;UBERON:0003060!2.08e-07!17;UBERON:0002204!2.56e-07!167;UBERON:0003102!2.67e-07!95;UBERON:0000483!3.64e-07!309;UBERON:0001009!5.06e-07!113;UBERON:0003081!9.61e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;3.14e-08;15!UBERON:0004819;3.14e-08;15!UBERON:0001285;3.14e-08;15!UBERON:0007684;3.14e-08;15!UBERON:0003914;8.36e-08;74!UBERON:0010371;2.63e-07;31!UBERON:0001637;6.24e-07;42!UBERON:0003509;6.24e-07;42!UBERON:0004572;6.24e-07;42!UBERON:0001225;7.43e-07;12!UBERON:0008987;7.43e-07;12!UBERON:0000353;9.88e-07;15 | |||
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| ||
|short_description=p1@PHLDA2 | |||
}} | }} |
Latest revision as of 13:21, 17 September 2015
Short description: | p1@PHLDA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PHLDA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_003311, uc001lxa.1_5end |
EntrezGene: | PHLDA2 |
HGNC: | 12385 |
UniProt: | Q53GA4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.07e-26 | 253 |
embryonic cell | 1.08e-25 | 250 |
mesodermal cell | 4.81e-15 | 121 |
smooth muscle cell | 3.07e-13 | 43 |
smooth muscle myoblast | 3.07e-13 | 43 |
muscle precursor cell | 3.10e-12 | 58 |
myoblast | 3.10e-12 | 58 |
multi-potent skeletal muscle stem cell | 3.10e-12 | 58 |
muscle cell | 5.08e-12 | 55 |
vascular associated smooth muscle cell | 9.50e-11 | 32 |
electrically responsive cell | 1.22e-09 | 61 |
electrically active cell | 1.22e-09 | 61 |
ecto-epithelial cell | 7.15e-09 | 34 |
endo-epithelial cell | 2.84e-08 | 42 |
epithelial cell of nephron | 3.16e-08 | 15 |
columnar/cuboidal epithelial cell | 2.74e-07 | 27 |
kidney cell | 4.08e-07 | 17 |
kidney epithelial cell | 4.08e-07 | 17 |
kidney cortical cell | 7.43e-07 | 12 |
renal cortical epithelial cell | 7.43e-07 | 12 |