FFCP PHASE1:Hg19::chr5:22853470..22853486,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:22853470..22853486,- to FFCP PHASE1:Hg19::chr5:22853470..22853486,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1010 | |EntrezGene=1010 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1751 | |HGNC=1751 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-20bp_to_ENST00000504376_5end | |||
|cluster_id=chr5:22853470..22853486,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_CDH12_5end | |||
|id=chr5:22853470..22853486,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.99e-16;82!UBERON:0010122;7.62e-12;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.71e-68!57;UBERON:0005068!1.71e-68!57;UBERON:0006241!1.71e-68!57;UBERON:0007135!1.71e-68!57;UBERON:0002616!8.23e-66!59;UBERON:0002780!6.36e-63!41;UBERON:0001890!6.36e-63!41;UBERON:0006240!6.36e-63!41;UBERON:0003080!3.16e-61!42;UBERON:0000955!4.64e-60!69;UBERON:0006238!4.64e-60!69;UBERON:0001893!2.28e-59!34;UBERON:0001869!2.36e-59!32;UBERON:0002020!3.55e-59!34;UBERON:0003528!3.55e-59!34;UBERON:0002791!9.14e-57!33;UBERON:0001017!2.95e-54!82;UBERON:0005743!1.12e-53!86;UBERON:0000073!1.08e-49!94;UBERON:0001016!1.08e-49!94;UBERON:0002346!7.10e-49!90;UBERON:0003075!1.94e-46!86;UBERON:0007284!1.94e-46!86;UBERON:0002619!3.45e-44!22;UBERON:0000956!4.16e-42!25;UBERON:0000203!4.16e-42!25;UBERON:0003056!5.78e-42!61;UBERON:0001950!2.33e-39!20;UBERON:0000033!1.67e-35!123;UBERON:0000153!7.08e-35!129;UBERON:0007811!7.08e-35!129;UBERON:0007023!2.61e-32!115;UBERON:0000924!8.44e-27!173;UBERON:0006601!8.44e-27!173;UBERON:0004121!7.04e-25!169;UBERON:0002308!3.12e-18!9;UBERON:0000125!3.12e-18!9;UBERON:0000025!6.57e-16!194;UBERON:0001872!2.51e-14!5;UBERON:0002420!3.31e-14!9;UBERON:0007245!3.31e-14!9;UBERON:0010009!3.31e-14!9;UBERON:0010011!3.31e-14!9;UBERON:0000454!3.31e-14!9;UBERON:0002021!3.75e-14!5;UBERON:0009663!6.11e-14!7;UBERON:0004733!1.27e-12!12;UBERON:0002028!1.27e-12!12;UBERON:0007277!1.27e-12!12;UBERON:0000369!4.10e-12!4;UBERON:0002435!4.10e-12!4;UBERON:0000204!4.10e-12!4;UBERON:0010082!4.10e-12!4;UBERON:0001871!5.22e-12!7;UBERON:0000200!6.17e-12!6;UBERON:0000064!7.32e-12!219;UBERON:0004732!1.54e-11!13;UBERON:0004111!2.57e-11!241;UBERON:0002298!4.27e-11!8;UBERON:0003076!8.30e-10!15;UBERON:0003057!8.30e-10!15;UBERON:0000477!1.33e-09!286;UBERON:0005383!1.86e-09!3;UBERON:0005382!1.86e-09!3;UBERON:0000483!3.08e-09!309;UBERON:0002771!3.12e-09!3;UBERON:0000349!4.25e-09!5;UBERON:0000119!4.93e-09!312;UBERON:0000475!1.08e-08!365;UBERON:0000988!1.66e-08!3;UBERON:0001896!3.22e-08!3;UBERON:0005290!3.22e-08!3;UBERON:0010096!3.22e-08!3;UBERON:0000481!6.35e-08!347;UBERON:0002680!3.95e-07!9;UBERON:0001895!3.95e-07!9;UBERON:0010092!3.95e-07!9;UBERON:0001873!8.10e-07!2;UBERON:0010122!8.10e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.06e-77;32!UBERON:0001893;1.28e-73;34!UBERON:0002791;2.37e-71;32!UBERON:0002619;2.79e-71;22!UBERON:0003528;1.18e-65;34!UBERON:0002020;1.18e-65;34!UBERON:0000956;1.34e-62;25!UBERON:0000203;1.34e-62;25!UBERON:0001950;9.14e-62;20!UBERON:0002780;1.58e-57;41!UBERON:0001890;1.58e-57;41!UBERON:0000073;1.66e-41;53!UBERON:0002616;1.66e-41;53!UBERON:0001017;2.41e-32;75!UBERON:0000955;4.07e-32;68!UBERON:0001872;8.93e-27;5!UBERON:0000369;2.95e-22;4!UBERON:0002435;2.95e-22;4!UBERON:0000204;2.95e-22;4!UBERON:0000200;3.73e-22;6!UBERON:0001016;5.11e-20;83!UBERON:0009663;3.02e-19;7!UBERON:0002021;9.92e-18;5!UBERON:0005383;4.67e-17;3!UBERON:0005382;4.67e-17;3!UBERON:0002420;6.36e-15;9!UBERON:0000125;6.36e-15;9!UBERON:0007245;6.36e-15;9!UBERON:0002308;6.36e-15;9!UBERON:0010009;6.36e-15;9!UBERON:0010011;6.36e-15;9!UBERON:0000454;6.36e-15;9!UBERON:0001871;3.80e-12;6!UBERON:0007023;4.36e-12;114!UBERON:0001873;7.62e-12;2!UBERON:0002771;1.38e-11;2!UBERON:0001954;1.38e-11;2!UBERON:0003022;1.38e-11;2!UBERON:0002421;1.38e-11;2!UBERON:0002600;1.38e-11;2!UBERON:0000007;2.75e-11;2!UBERON:0000349;2.78e-10;5!UBERON:0011216;5.29e-10;132!UBERON:0001870;3.55e-08;3!UBERON:0002902;6.42e-07;1!UBERON:0001882;6.42e-07;1!UBERON:0002022;6.42e-07;1!UBERON:0001874;6.42e-07;1!UBERON:0009899;6.42e-07;1!UBERON:0007190;6.42e-07;1!UBERON:0005403;6.42e-07;1!UBERON:0002581;8.96e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,6.61e-89,32;UBERON:0001893,1.58e-83,34;UBERON:0002791,2.86e-81,32;UBERON:0002780,1.07e-80,41;UBERON:0001890,1.07e-80,41;UBERON:0003080,1.07e-80,41;UBERON:0006240,1.07e-80,41;UBERON:0000073,3.89e-77,53;UBERON:0002616,3.89e-77,53;UBERON:0003528,2.44e-76,34;UBERON:0002020,2.44e-76,34;UBERON:0001049,9.15e-73,56;UBERON:0005068,9.15e-73,56;UBERON:0006241,9.15e-73,56;UBERON:0007135,9.15e-73,56;UBERON:0002619,9.53e-72,22;UBERON:0000955,3.71e-67,68;UBERON:0006238,3.71e-67,68;UBERON:0001017,1.35e-63,81;UBERON:0000956,5.22e-63,25;UBERON:0000203,5.22e-63,25;UBERON:0001950,2.13e-62,20;UBERON:0001016,9.36e-57,89;UBERON:0003056,7.05e-53,61;UBERON:0002346,9.39e-53,86;UBERON:0003075,4.18e-48,82;UBERON:0007284,4.18e-48,82;UBERON:0010371,9.11e-37,104;UBERON:0007023,4.53e-36,114;UBERON:0004121,4.94e-31,171;UBERON:0000924,4.94e-31,171;UBERON:0006601,4.94e-31,171;UBERON:0010314,6.07e-30,132;UBERON:0001872,7.25e-27,5;UBERON:0000200,1.61e-22,6;UBERON:0000369,1.82e-22,4;UBERON:0002435,1.82e-22,4;UBERON:0000204,1.82e-22,4;UBERON:0010082,1.82e-22,4;UBERON:0011216,3.22e-22,223;UBERON:0009663,2.82e-19,7;UBERON:0002021,6.76e-18,5;UBERON:0000025,3.10e-17,192;UBERON:0005383,3.38e-17,3;UBERON:0005382,3.38e-17,3;UBERON:0002420,6.02e-15,9;UBERON:0000125,6.02e-15,9;UBERON:0007245,6.02e-15,9;UBERON:0002308,6.02e-15,9;UBERON:0010009,6.02e-15,9;UBERON:0010011,6.02e-15,9;UBERON:0000454,6.02e-15,9;UBERON:0004111,1.37e-12,240;UBERON:0001871,2.52e-12,6;UBERON:0001873,5.51e-12,2;UBERON:0010122,5.51e-12,2;UBERON:0002771,8.51e-12,2;UBERON:0001954,2.35e-11,2;UBERON:0003022,2.35e-11,2;UBERON:0002421,2.35e-11,2;UBERON:0002600,2.35e-11,2;UBERON:0000007,6.03e-11,2;UBERON:0000349,3.48e-10,5;UBERON:0000483,1.41e-08,306;UBERON:0000119,1.95e-08,309;UBERON:0001870,2.76e-08,3;UBERON:0001882,5.43e-07,1;UBERON:0005403,5.43e-07,1;UBERON:0002022,5.75e-07,1;UBERON:0007190,6.08e-07,1;UBERON:0001874,6.43e-07,1;UBERON:0002902,6.80e-07,1;UBERON:0009899,6.80e-07,1;UBERON:0002581,8.49e-07,1 | |||
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| ||
|short_description=p2@CDH12 | |||
}} | }} |
Latest revision as of 13:12, 17 September 2015
Short description: | p2@CDH12 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDH12_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -20bp_to_ENST00000504376_5end |
EntrezGene: | CDH12 |
HGNC: | 1751 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data