FFCP PHASE1:Hg19::chr1:155290677..155290753,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23623 | |EntrezGene=23623 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17153 | |HGNC=17153 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BVN2 | |UniProt=Q9BVN2 | ||
|association_with_transcript=0bp_to_ENST00000368352,ENST00000368354_5end | |association_with_transcript=0bp_to_ENST00000368352,ENST00000368354_5end | ||
|cluster_id=chr1:155290677..155290753,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_2_at_RUSC1_5end | |description=CAGE_peak_2_at_RUSC1_5end | ||
|id=chr1:155290677..155290753,+ | |id=chr1:155290677..155290753,+ | ||
|ontology_enrichment_celltype=CL:0000055!6.98e-14!180;CL:0000393!3.50e-10!60;CL:0000211!3.50e-10!60;CL:0000183!3.50e-10!59;CL:0000187!6.02e-09!54;CL:0000680!7.07e-09!57;CL:0000056!7.07e-09!57;CL:0000355!7.07e-09!57;CL:0000192!1.91e-08!42;CL:0000514!1.91e-08!42;CL:0000359!2.06e-07!32 | |ontology_enrichment_celltype=CL:0000055!6.98e-14!180;CL:0000393!3.50e-10!60;CL:0000211!3.50e-10!60;CL:0000183!3.50e-10!59;CL:0000187!6.02e-09!54;CL:0000680!7.07e-09!57;CL:0000056!7.07e-09!57;CL:0000355!7.07e-09!57;CL:0000192!1.91e-08!42;CL:0000514!1.91e-08!42;CL:0000359!2.06e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.52e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,3.38e-10,61;CL:0000211,3.38e-10,61;CL:0000187,6.70e-09,55;CL:0000680,7.60e-09,58;CL:0000056,7.60e-09,58;CL:0000355,7.60e-09,58;CL:0000192,1.35e-08,43;CL:0000514,1.35e-08,43;CL:0000359,1.72e-07,32 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.54e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.61e-34!57;UBERON:0005068!1.61e-34!57;UBERON:0006241!1.61e-34!57;UBERON:0007135!1.61e-34!57;UBERON:0002616!3.24e-31!59;UBERON:0001017!2.85e-30!82;UBERON:0003075!4.17e-30!86;UBERON:0007284!4.17e-30!86;UBERON:0007023!5.17e-30!115;UBERON:0002346!1.23e-29!90;UBERON:0005743!1.52e-29!86;UBERON:0000073!3.28e-29!94;UBERON:0001016!3.28e-29!94;UBERON:0003080!4.56e-26!42;UBERON:0000955!1.38e-25!69;UBERON:0006238!1.38e-25!69;UBERON:0002780!1.60e-25!41;UBERON:0001890!1.60e-25!41;UBERON:0006240!1.60e-25!41;UBERON:0000025!3.09e-23!194;UBERON:0002020!2.81e-22!34;UBERON:0003528!2.81e-22!34;UBERON:0001893!5.31e-22!34;UBERON:0001869!8.40e-22!32;UBERON:0002791!2.51e-21!33;UBERON:0003056!6.71e-21!61;UBERON:0000475!9.03e-21!365;UBERON:0000924!5.72e-20!173;UBERON:0006601!5.72e-20!173;UBERON:0004121!6.86e-20!169;UBERON:0004111!9.17e-20!241;UBERON:0000119!3.46e-19!312;UBERON:0000483!5.25e-19!309;UBERON:0000477!3.15e-18!286;UBERON:0000956!1.06e-17!25;UBERON:0000203!1.06e-17!25;UBERON:0000153!4.31e-17!129;UBERON:0007811!4.31e-17!129;UBERON:0000033!6.85e-17!123;UBERON:0002619!1.58e-16!22;UBERON:0000481!2.10e-15!347;UBERON:0001950!2.52e-15!20;UBERON:0000468!1.08e-14!659;UBERON:0000480!6.88e-11!626;UBERON:0000064!1.04e-10!219;UBERON:0000467!1.61e-10!625;UBERON:0002385!4.29e-10!63;UBERON:0001015!4.29e-10!63;UBERON:0000383!4.29e-10!63;UBERON:0000922!4.44e-10!612;UBERON:0001134!1.21e-09!61;UBERON:0002036!1.21e-09!61;UBERON:0003082!1.21e-09!61;UBERON:0003076!1.77e-09!15;UBERON:0003057!1.77e-09!15;UBERON:0000914!4.94e-09!83;UBERON:0002329!4.94e-09!83;UBERON:0003077!4.94e-09!83;UBERON:0003059!4.94e-09!83;UBERON:0007282!4.94e-09!83;UBERON:0009618!4.94e-09!83;UBERON:0007285!4.94e-09!83;UBERON:0002050!5.51e-09!605;UBERON:0005423!5.51e-09!605;UBERON:0000923!1.01e-08!604;UBERON:0005291!1.01e-08!604;UBERON:0006598!1.01e-08!604;UBERON:0002532!1.01e-08!604;UBERON:0004290!1.36e-08!70;UBERON:0004732!1.40e-08!13;UBERON:0004733!3.49e-08!12;UBERON:0002028!3.49e-08!12;UBERON:0007277!3.49e-08!12;UBERON:0001637!7.87e-08!42;UBERON:0003509!7.87e-08!42;UBERON:0004572!7.87e-08!42;UBERON:0004872!8.31e-08!84;UBERON:0000486!1.38e-07!82;UBERON:0001981!1.65e-07!60;UBERON:0007500!1.65e-07!60;UBERON:0004537!1.65e-07!60;UBERON:0006965!1.65e-07!60;UBERON:0002049!3.70e-07!79;UBERON:0007798!3.70e-07!79;UBERON:0004573!4.10e-07!33;UBERON:0004571!4.10e-07!33;UBERON:0000055!4.10e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.89e-21;32!UBERON:0003528;1.45e-20;34!UBERON:0002020;1.45e-20;34!UBERON:0002791;1.86e-20;32!UBERON:0001893;2.65e-20;34!UBERON:0002780;1.40e-19;41!UBERON:0001890;1.40e-19;41!UBERON:0000073;2.21e-19;53!UBERON:0002616;2.21e-19;53!UBERON:0000956;9.76e-19;25!UBERON:0000203;9.76e-19;25!UBERON:0002619;1.60e-17;22!UBERON:0001950;3.07e-16;20!UBERON:0000955;7.72e-13;68!UBERON:0001017;1.00e-12;75!UBERON:0001016;4.10e-11;83!UBERON:0004732;5.43e-09;13!UBERON:0007023;9.78e-09;114!UBERON:0004733;1.37e-08;12!UBERON:0002028;1.37e-08;12!UBERON:0002680;6.74e-07;9!UBERON:0001895;6.74e-07;9!UBERON:0004573;7.34e-07;33!UBERON:0004571;7.34e-07;33 | |||
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| ||
|short_description=p2@RUSC1 | |short_description=p2@RUSC1 | ||
}} | }} |
Latest revision as of 12:29, 17 September 2015
Short description: | p2@RUSC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RUSC1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000368352, ENST00000368354_5end |
EntrezGene: | RUSC1 |
HGNC: | 17153 |
UniProt: | Q9BVN2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 3.38e-10 | 61 |
electrically active cell | 3.38e-10 | 61 |
muscle cell | 6.70e-09 | 55 |
muscle precursor cell | 7.60e-09 | 58 |
myoblast | 7.60e-09 | 58 |
multi-potent skeletal muscle stem cell | 7.60e-09 | 58 |
smooth muscle cell | 1.35e-08 | 43 |
smooth muscle myoblast | 1.35e-08 | 43 |
vascular associated smooth muscle cell | 1.72e-07 | 32 |