FFCP PHASE1:Hg19::chr5:1887070..1887114,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:1887070..1887114,-
|short_description=p1@IRX4
|description=CAGE_peak_1_at_IRX4_5end
|association_with_transcript=217bp_to_ENST00000505790_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=50805 | |EntrezGene=50805 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6129 | |HGNC=6129 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=217bp_to_ENST00000505790_5end | |||
|cluster_id=chr5:1887070..1887114,- | |||
|description=CAGE_peak_1_at_IRX4_5end | |||
|id=chr5:1887070..1887114,- | |||
|ontology_enrichment_celltype=CL:0000039!1.82e-17!7;CL:0000586!1.82e-17!7;CL:0002251!3.50e-12!21;CL:0000362!1.18e-11!8;CL:0000240!1.71e-10!6;CL:0000311!1.71e-10!6;CL:0000079!1.71e-10!6;CL:0000237!1.71e-10!6;CL:0000036!1.71e-10!6;CL:0000357!1.71e-10!6;CL:0000114!1.71e-10!6;CL:0002159!5.71e-09!13;CL:0000312!8.79e-09!5;CL:0002621!1.99e-08!3;CL:0000066!2.23e-08!254;CL:0002076!6.12e-08!43;CL:0002077!7.61e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.03e-18;7!CL:0000586;1.03e-18;7!CL:0000362;7.66e-15;9!CL:0002327;1.29e-12;4!CL:0002251;6.49e-12;20!CL:0000317;8.83e-12;2!CL:1000448;8.83e-12;2!CL:0002308;8.83e-12;2!CL:0002140;8.83e-12;2!CL:0000312;2.54e-10;5!CL:0000622;5.70e-10;5!CL:0002159;1.92e-09;14!CL:0000240;1.13e-08;6!CL:0000311;1.13e-08;6!CL:0000079;1.13e-08;6!CL:0000237;1.13e-08;6!CL:0000154;2.21e-08;6!CL:0002621;7.78e-08;3!CL:0002252;8.20e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.26e-18,7;CL:0000586,1.26e-18,7;CL:0000362,7.55e-15,9;CL:0002327,1.37e-12,4;CL:0002251,6.49e-12,20;CL:0000317,8.83e-12,2;CL:1000448,8.83e-12,2;CL:0002308,8.83e-12,2;CL:0002140,8.83e-12,2;CL:0000312,2.50e-10,5;CL:0000622,6.35e-10,5;CL:0002159,1.90e-09,14;CL:0000240,1.12e-08,6;CL:0000311,1.12e-08,6;CL:0000079,1.12e-08,6;CL:0000237,1.12e-08,6;CL:0000036,1.12e-08,6;CL:0000357,1.12e-08,6;CL:0000114,1.12e-08,6;CL:0000154,2.41e-08,6;CL:0002621,7.65e-08,3;CL:0000066,2.55e-07,253;CL:0002252,8.21e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000357;1.13e-08;6!CL:0000114;1.13e-08;6 | |||
|ontology_enrichment_disease=DOID:1749!5.89e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:114;1.90e-11;2!DOID:1749;5.58e-09;14!DOID:3151;5.58e-07;1!DOID:3149;5.58e-07;1!DOID:1799;5.89e-07;1!DOID:10165;5.89e-07;1!DOID:1798;5.89e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.06e-11,2;DOID:1749,5.30e-09,14;DOID:3151,5.58e-07,1;DOID:3149,5.58e-07,1;DOID:1799,5.90e-07,1;DOID:10165,5.90e-07,1;DOID:1798,5.90e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000473!4.29e-10!8;UBERON:0000166!6.28e-10!21;UBERON:0003103!1.26e-09!69;UBERON:0003135!1.44e-09!11;UBERON:0000161!5.30e-09!35;UBERON:0003101!7.51e-09!22;UBERON:0000079!7.51e-09!22;UBERON:0001949!1.99e-08!3;UBERON:0003729!2.07e-08!5;UBERON:0001003!2.16e-08!14;UBERON:0007376!2.16e-08!14;UBERON:0007383!2.16e-08!14;UBERON:0000165!2.74e-08!28;UBERON:0000930!2.74e-08!28;UBERON:0001723!4.82e-08!3;UBERON:0001033!4.82e-08!3;UBERON:0010056!4.82e-08!3;UBERON:0003102!4.44e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;1.29e-12;4!UBERON:0003343;1.60e-12;4!UBERON:0004785;1.60e-12;4!UBERON:0001003;3.26e-12;15!UBERON:0007376;3.26e-12;15!UBERON:0002419;8.83e-12;2!UBERON:0007771;8.83e-12;2!UBERON:0003297;8.83e-12;2!UBERON:0001821;8.83e-12;2!UBERON:0003487;8.83e-12;2!UBERON:0001820;8.83e-12;2!UBERON:0003729;6.71e-10;13!UBERON:0010371;1.49e-09;31!UBERON:0000161;2.80e-09;19!UBERON:0000166;2.80e-09;19!UBERON:0007100;4.02e-09;25!UBERON:0000974;1.69e-08;6!UBERON:0001949;7.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,1.37e-12,4;UBERON:0005333,1.37e-12,4;UBERON:0008425,1.37e-12,4;UBERON:0005311,1.37e-12,4;UBERON:0003343,1.43e-12,4;UBERON:0004785,1.43e-12,4;UBERON:0001003,2.95e-12,15;UBERON:0007376,2.95e-12,15;UBERON:0007383,2.95e-12,15;UBERON:0002419,8.83e-12,2;UBERON:0007771,8.83e-12,2;UBERON:0003297,8.83e-12,2;UBERON:0001821,8.83e-12,2;UBERON:0003487,8.83e-12,2;UBERON:0001820,8.83e-12,2;UBERON:0005089,8.83e-12,2;UBERON:0005088,8.83e-12,2;UBERON:0003729,6.28e-10,13;UBERON:0007100,2.03e-08,27;UBERON:0000166,6.21e-08,22;UBERON:0001949,7.65e-08,3;UBERON:0003102,1.96e-07,99 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.41359888642308,0,0,0,0,0,1.12135520028461,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,4.36393792945335,2.86804595389004,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03626569747441,4.49607013030478,8.44443368257699,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,3.13454829459969,4.35950907770943,9.96794965829549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0.802025881213139,3.13075362382048,0,0,0,0,0.0770153371044148,0.784349769176855,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,5.16838984196555,5.85054221432869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0.842516912477962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44999915086959,0.455173793141999,0,2.36387681767936,0,0,0,0,0,0,0,0,0,0,5.57694977114413,0.230850775511391,0,8.30030055797016,9.15527972979676,9.01773186952667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969890164884194,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,2.12124631155116,0,0,0,0,0,0,0,0,0,0,1.60412296808179,0,3.79390100948083,4.29226048136571,2.90122894674434,4.83721001904429,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1008650047648,0,0.157363764404994,0,0,0,0,3.97255182219259,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11903606175556,2.48830904013189,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,4.9547283806051,3.30171477339022,6.58496297056928,0,0,0,0,0,0,10.4762677792569,0.327543835020193,0,0,0,0,0,0,0,0.496211178389294,0,0.894336993477167,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.863424021355654,0,0,0,0,0,0,0,0,0,0,1.03608082081518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94284397223656,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07132363163395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61193297845189,0.801652215796681,1.01084389488329,1.25353769646188,0.227336094654718,0.267964130156178,0,0,0.852935927603924,0.952257725854961,0,0,0,0,0,0.653150243690884,0.342233301085281,0.134704106029175,0.0717222053926763,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@IRX4 | |||
}} | }} |
Latest revision as of 12:26, 17 September 2015
Short description: | p1@IRX4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IRX4_5end |
Coexpression cluster: | NA |
Association with transcript: | 217bp_to_ENST00000505790_5end |
EntrezGene: | IRX4 |
HGNC: | 6129 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.26e-18 | 7 |
germ cell | 1.26e-18 | 7 |
epidermal cell | 7.55e-15 | 9 |
mammary gland epithelial cell | 1.37e-12 | 4 |
epithelial cell of alimentary canal | 6.49e-12 | 20 |
sebum secreting cell | 8.83e-12 | 2 |
epithelial cell of sweat gland | 8.83e-12 | 2 |
epithelial cell of skin gland | 8.83e-12 | 2 |
acinar cell of sebaceous gland | 8.83e-12 | 2 |
keratinocyte | 2.50e-10 | 5 |
acinar cell | 6.35e-10 | 5 |
general ecto-epithelial cell | 1.90e-09 | 14 |
stratified squamous epithelial cell | 1.12e-08 | 6 |
keratin accumulating cell | 1.12e-08 | 6 |
stratified epithelial cell | 1.12e-08 | 6 |
keratinizing barrier epithelial cell | 1.12e-08 | 6 |
epithelial fate stem cell | 1.12e-08 | 6 |
stratified epithelial stem cell | 1.12e-08 | 6 |
surface ectodermal cell | 1.12e-08 | 6 |
protein secreting cell | 2.41e-08 | 6 |
gingival epithelial cell | 7.65e-08 | 3 |
epithelial cell | 2.55e-07 | 253 |
epithelial cell of esophagus | 8.21e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 1.37e-12 | 4 |
mammary bud | 1.37e-12 | 4 |
mammary ridge | 1.37e-12 | 4 |
mammary placode | 1.37e-12 | 4 |
mucosa of oral region | 1.43e-12 | 4 |
respiratory system mucosa | 1.43e-12 | 4 |
skin epidermis | 2.95e-12 | 15 |
outer epithelium | 2.95e-12 | 15 |
enveloping layer of ectoderm | 2.95e-12 | 15 |
skin gland | 8.83e-12 | 2 |
epidermis gland | 8.83e-12 | 2 |
gland of integumental system | 8.83e-12 | 2 |
sebaceous gland | 8.83e-12 | 2 |
skin sebaceous gland | 8.83e-12 | 2 |
sweat gland | 8.83e-12 | 2 |
sweat gland placode | 8.83e-12 | 2 |
sebaceous gland placode | 8.83e-12 | 2 |
mouth mucosa | 6.28e-10 | 13 |
primary circulatory organ | 2.03e-08 | 27 |
oral opening | 6.21e-08 | 22 |
gingival epithelium | 7.65e-08 | 3 |
surface structure | 1.96e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.06e-11 | 2 |
squamous cell carcinoma | 5.30e-09 | 14 |
skin squamous cell carcinoma | 5.58e-07 | 1 |
keratoacanthoma | 5.58e-07 | 1 |
islet cell tumor | 5.90e-07 | 1 |
endocrine pancreas cancer | 5.90e-07 | 1 |
pancreatic endocrine carcinoma | 5.90e-07 | 1 |