FFCP PHASE1:Hg19::chr2:47601035..47601052,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4072 | |EntrezGene=4072 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11529 | |HGNC=11529 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=121bp_to_ENST00000490733_5end | |||
|cluster_id=chr2:47601035..47601052,+ | |||
|coexpression_cluster_id=C1908 | |||
|description=CAGE_peak_10_at_EPCAM_5end | |||
|id=chr2:47601035..47601052,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.91e-15!254;CL:0000039!4.06e-10!7;CL:0000586!4.06e-10!7;CL:0000223!1.14e-08!59;CL:0002322!3.76e-08!5;CL:0002076!2.24e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000313;1.21e-09;1!CL:0002553;3.39e-09;1!CL:0002076;4.47e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.32e-09,1;CL:0002553,2.77e-09,1;CL:0002076,1.18e-08,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.46e-29!106;DOID:0050687!1.69e-21!143;DOID:299!2.02e-11!25;DOID:162!1.54e-10!235;DOID:14566!5.58e-10!239;DOID:1749!1.65e-09!14;DOID:3119!5.19e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:299;4.82e-11;25!DOID:2152;1.21e-09;1!DOID:120;2.84e-07;27!DOID:193;9.31e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:299,5.49e-11,25;DOID:2152,1.32e-09,1;DOID:305,8.85e-09,106;DOID:120,3.23e-07,27;DOID:0050687,3.95e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001007!7.63e-11!155;UBERON:0001555!7.63e-11!155;UBERON:0007026!7.63e-11!155;UBERON:0004119!5.48e-10!169;UBERON:0000925!5.48e-10!169;UBERON:0006595!5.48e-10!169;UBERON:0004921!1.21e-09!129;UBERON:0004185!1.21e-09!129;UBERON:0005409!2.81e-09!35;UBERON:0000160!1.04e-08!27;UBERON:0000466!4.37e-08!126;UBERON:0003135!1.52e-07!11;UBERON:0005911!1.66e-07!82;UBERON:0003101!2.99e-07!22;UBERON:0000079!2.99e-07!22;UBERON:0000464!4.92e-07!104;UBERON:0000058!4.94e-07!26;UBERON:0005153!7.03e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;2.16e-16;22!UBERON:0000160;9.82e-16;17!UBERON:0002108;2.20e-15;4!UBERON:0004921;1.49e-11;33!UBERON:0004911;1.21e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.46e-16,17;UBERON:0002108,3.01e-15,4;UBERON:0005409,1.78e-14,25;UBERON:0004911,1.32e-09,1;UBERON:0004921,1.13e-07,118;UBERON:0001007,5.08e-07,145;UBERON:0001555,5.08e-07,145;UBERON:0007026,5.08e-07,145 | |||
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| ||
|short_description=p10@EPCAM | |||
}} | }} |
Latest revision as of 12:15, 17 September 2015
Short description: | p10@EPCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_EPCAM_5end |
Coexpression cluster: | C1908_smallcell_endometrioid_small_colon_temporal_iPS_duodenum |
Association with transcript: | 121bp_to_ENST00000490733_5end |
EntrezGene: | EPCAM |
HGNC: | 11529 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.32e-09 | 1 |
lung fibroblast | 2.77e-09 | 1 |
endo-epithelial cell | 1.18e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.46e-16 | 17 |
small intestine | 3.01e-15 | 4 |
gastrointestinal system | 1.78e-14 | 25 |
epithelium of female gonad | 1.32e-09 | 1 |
subdivision of digestive tract | 1.13e-07 | 118 |
digestive system | 5.08e-07 | 145 |
digestive tract | 5.08e-07 | 145 |
primitive gut | 5.08e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 5.49e-11 | 25 |
ovary epithelial cancer | 1.32e-09 | 1 |
carcinoma | 8.85e-09 | 106 |
female reproductive organ cancer | 3.23e-07 | 27 |
cell type cancer | 3.95e-07 | 143 |