FFCP PHASE1:Hg19::chr2:47596105..47596122,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4072 | |EntrezGene=4072 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11529 | |HGNC=11529 | ||
|TSSclassifier=strong | |||
|UniProt=P16422 | |UniProt=P16422 | ||
|association_with_transcript=-164bp_to_ENST00000263735,NM_002354,uc002rvx.2_5end | |association_with_transcript=-164bp_to_ENST00000263735,NM_002354,uc002rvx.2_5end | ||
|cluster_id=chr2:47596105..47596122,+ | |||
|description=CAGE_peak_12_at_EPCAM_5end | |description=CAGE_peak_12_at_EPCAM_5end | ||
|id=chr2:47596105..47596122,+ | |id=chr2:47596105..47596122,+ | ||
|ontology_enrichment_celltype=CL:0000039;6.97e-33;7!CL:0000586;6.97e-33;7!CL:0002563;2.75e-15;4!CL:0002253;2.23e-08;2 | |ontology_enrichment_celltype=CL:0000039!7.42e-14!7;CL:0000586!7.42e-14!7;CL:0000990!2.17e-12!8;CL:0000453!5.25e-10!5;CL:0000451!7.72e-10!10;CL:0002322!2.30e-09!5;CL:0000840!9.98e-08!5;CL:0001029!9.98e-08!5 | ||
| | |ontology_enrichment_celltype_v019=CL:0000039;6.97e-33;7!CL:0000586;6.97e-33;7!CL:0002563;2.75e-15;4!CL:0002253;2.23e-08;2 | ||
|ontology_enrichment_disease=DOID:3095;1.05e-10;22!DOID:2994;1.05e-10;22 | |ontology_enrichment_celltype_v019_2=CL:0000039,5.93e-33,7;CL:0000586,5.93e-33,7;CL:0002563,2.96e-15,4;CL:0002253,2.31e-08,2 | ||
|ontology_enrichment_uberon=UBERON:0000160;1.12e-19;17!UBERON:0000473;8.47e-17;8!UBERON:0005409;2.05e-15;22!UBERON:0001242;2.75e-15;4!UBERON:0001262;2.75e-15;4!UBERON:0004786;2.75e-15;4!UBERON:0004808;2.75e-15;4!UBERON:0001277;2.75e-15;4!UBERON:0003135;2.17e-12;11!UBERON:0002108;2.99e-12;4!UBERON:0003101;1.05e-10;22!UBERON:0000079;1.05e-10;22!UBERON:0004921;7.80e-10;33!UBERON:0000485;3.88e-09;7!UBERON:0003929;3.88e-09;7!UBERON:0003350;4.19e-08;8!UBERON:0000922;4.84e-08;49!UBERON:0001155;3.34e-07;9!UBERON:0000991;9.58e-07;21 | |ontology_enrichment_development_v019=UBERON:0009117;1.44e-13;10!UBERON:0005564;1.44e-13;10 | ||
|ontology_enrichment_disease=DOID:305!1.34e-16!106;DOID:0050687!1.31e-12!143;DOID:162!1.19e-07!235;DOID:14566!3.04e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.05e-10;22!DOID:2994;1.05e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.00e-10,22;DOID:2994,1.00e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0000160!2.18e-09!27;UBERON:0005409!8.40e-09!35;UBERON:0000059!2.27e-08!11;UBERON:0001007!1.59e-07!155;UBERON:0001555!1.59e-07!155;UBERON:0007026!1.59e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.12e-19;17!UBERON:0000473;8.47e-17;8!UBERON:0005409;2.05e-15;22!UBERON:0001242;2.75e-15;4!UBERON:0001262;2.75e-15;4!UBERON:0004786;2.75e-15;4!UBERON:0004808;2.75e-15;4!UBERON:0001277;2.75e-15;4!UBERON:0003135;2.17e-12;11!UBERON:0002108;2.99e-12;4!UBERON:0003101;1.05e-10;22!UBERON:0000079;1.05e-10;22!UBERON:0004921;7.80e-10;33!UBERON:0000485;3.88e-09;7!UBERON:0003929;3.88e-09;7!UBERON:0003350;4.19e-08;8!UBERON:0000922;4.84e-08;49!UBERON:0001155;3.34e-07;9!UBERON:0000991;9.58e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.34e-19,17;UBERON:0000473,7.83e-17,8;UBERON:0001242,2.96e-15,4;UBERON:0001262,2.96e-15,4;UBERON:0004786,2.96e-15,4;UBERON:0004808,2.96e-15,4;UBERON:0001277,2.96e-15,4;UBERON:0005409,1.37e-13,25;UBERON:0003135,2.05e-12,11;UBERON:0002108,3.35e-12,4;UBERON:0003101,9.29e-11,22;UBERON:0000079,9.29e-11,22;UBERON:0003350,4.34e-08,8;UBERON:0000485,2.77e-07,9;UBERON:0001155,3.55e-07,9;UBERON:0000991,9.31e-07,21;UBERON:0009196,9.31e-07,21;UBERON:0009117,9.31e-07,21;UBERON:0005564,9.31e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.530119073285941,0.464775771478074,0.518305275076852,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45976877086227,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93375119346596,0,0,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.921597462471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0.251932747854276,0,0,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0.0927680981618513,1.99613798001194,0,0.787139999965761,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38338342632836,0.359030577639089,0.108647371922008,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0.635746315921515,0.421996129056054,0.326465616318295,1.27217764290547,0,0.995261931078505,0.619202951523374,1.22206028986725,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0.61214552326098,0,0.300646838828985,0,0,0,0,0,0.284609546029793,0,1.04135843001079,0,0.174118413160805,0.17472666824203,0,0,0,0,0,0.0882561266915003,0,0,0,0.0633107959558787,0.195551382734803,0.320635281006135,0.426905989478705,0,0.288180834308212,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247247575143499,0,0,0,0,0,0.803765742325096,0,0,0.674921674654501,0.77380195455795,0.121499113316049,0,0,0.104909176269996,0,0,0.191915197319445,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0.779441235357554,0.531459361253452,0.163565394255844,0,0,0,0,0.533458648470704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0.756215088665154,0.138314504928436,0,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0.0634158101939068,0,0.548257766857182,0,0,0.766574565837572,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0.280272163313789,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447421727191169,0.098150233615243,0.121917924982269,0,0,0,0,0.467878926924211,0,0.475680363110274,0.22589216407792,0,1.20770274853339,1.54348316215889,0.655678681511872,0,0,0,0,0,0.4226557275834,0,0,0,0,0.178553938605658,0,0.160482733378337,0,0,0,0,0.0679914901909147,0,1.0580536810308,0,0,0,0,0.218531143927391,0.253397002022874,1.73381010561369,2.13773924212448,2.75684698604535,0.50141507858475,0,0,0,0.103432995861895,0,0.952257725854961,0,0.124149428591716,0.112131862580613,0.381882949668989,0.606351566874658,0,0,0,0.0717222053926763,0,0,0,0,0.269475606319761,0,0.122241444182866,0,0,0,0 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| ||
|short_description=p12@EPCAM | |short_description=p12@EPCAM | ||
}} | }} |
Latest revision as of 12:02, 17 September 2015
Short description: | p12@EPCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_EPCAM_5end |
Coexpression cluster: | NA |
Association with transcript: | -164bp_to_ENST00000263735, NM_002354, uc002rvx.2_5end |
EntrezGene: | EPCAM |
HGNC: | 11529 |
UniProt: | P16422 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.93e-33 | 7 |
germ cell | 5.93e-33 | 7 |
intestinal epithelial cell | 2.96e-15 | 4 |
epithelial cell of large intestine | 2.31e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.34e-19 | 17 |
testis | 7.83e-17 | 8 |
intestinal mucosa | 2.96e-15 | 4 |
wall of intestine | 2.96e-15 | 4 |
gastrointestinal system mucosa | 2.96e-15 | 4 |
gastrointestinal system epithelium | 2.96e-15 | 4 |
intestinal epithelium | 2.96e-15 | 4 |
gastrointestinal system | 1.37e-13 | 25 |
male reproductive organ | 2.05e-12 | 11 |
small intestine | 3.35e-12 | 4 |
male organism | 9.29e-11 | 22 |
male reproductive system | 9.29e-11 | 22 |
epithelium of mucosa | 4.34e-08 | 8 |
simple columnar epithelium | 2.77e-07 | 9 |
colon | 3.55e-07 | 9 |
gonad | 9.31e-07 | 21 |
indifferent external genitalia | 9.31e-07 | 21 |
indifferent gonad | 9.31e-07 | 21 |
gonad primordium | 9.31e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.00e-10 | 22 |
germ cell cancer | 1.00e-10 | 22 |