FFCP PHASE1:Hg19::chr16:67694129..67694182,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:67694129..67694182,-
|short_description=p1@ACD
|description=CAGE_peak_1_at_ACD_5end
|association_with_transcript=0bp_to_AK125623,AK301090_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=65057 | |EntrezGene=65057 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25070 | |HGNC=25070 | ||
|TSSclassifier=strong | |||
|UniProt=B4DVI0 | |UniProt=B4DVI0 | ||
|association_with_transcript=0bp_to_AK125623,AK301090_5end | |||
|cluster_id=chr16:67694129..67694182,- | |||
|description=CAGE_peak_1_at_ACD_5end | |||
|id=chr16:67694129..67694182,- | |||
|ontology_enrichment_celltype=CL:0000066!5.30e-20!254;CL:0000003!6.43e-10!722;CL:0002321!2.42e-09!248;CL:0000220!4.22e-09!246;CL:0000076!2.10e-08!62;CL:0000012!6.92e-08!682;CL:0000548!1.10e-07!679;CL:0000004!1.10e-07!679;CL:0000255!1.10e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:1000497;7.60e-08;17!CL:0002518;7.60e-08;17!CL:1000449;1.03e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.70e-20,253;CL:0002321,3.22e-09,250;CL:0000076,2.35e-08,63;CL:1000497,9.13e-08,17;CL:0002518,9.13e-08,17;CL:1000449,1.11e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.65e-15!235;DOID:14566!3.84e-15!239;DOID:305!3.59e-10!106;DOID:0050687!4.05e-10!143;DOID:2531!3.34e-07!51;DOID:0060083!3.34e-07!51;DOID:0050686!4.62e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.65e-15,235;DOID:14566,3.84e-15,239;DOID:305,3.59e-10,106;DOID:0050687,4.05e-10,143;DOID:2531,3.34e-07,51;DOID:0060083,3.34e-07,51;DOID:0050686,4.62e-07,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;3.09e-08;30!UBERON:0001008;3.09e-08;30!UBERON:0006555;1.03e-07;15!UBERON:0004819;1.03e-07;15!UBERON:0001285;1.03e-07;15!UBERON:0007684;1.03e-07;15!UBERON:0002113;1.30e-07;24!UBERON:0011143;1.30e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,1.11e-07,15;UBERON:0009773,1.11e-07,15;UBERON:0001231,1.11e-07,15;UBERON:0001285,1.11e-07,15;UBERON:0007684,1.11e-07,15;UBERON:0004208,1.11e-07,15;UBERON:0006555,9.06e-07,16;UBERON:0004819,9.06e-07,16 | |||
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| ||
|short_description=p1@ACD | |||
}} | }} |
Latest revision as of 11:56, 17 September 2015
Short description: | p1@ACD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ACD_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AK125623, AK301090_5end |
EntrezGene: | ACD |
HGNC: | 25070 |
UniProt: | B4DVI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.70e-20 | 253 |
embryonic cell | 3.22e-09 | 250 |
squamous epithelial cell | 2.35e-08 | 63 |
kidney cell | 9.13e-08 | 17 |
kidney epithelial cell | 9.13e-08 | 17 |
epithelial cell of nephron | 1.11e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 1.11e-07 | 15 |
renal tubule | 1.11e-07 | 15 |
nephron tubule | 1.11e-07 | 15 |
nephron | 1.11e-07 | 15 |
uriniferous tubule | 1.11e-07 | 15 |
nephrogenic mesenchyme | 1.11e-07 | 15 |
excretory tube | 9.06e-07 | 16 |
kidney epithelium | 9.06e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.65e-15 | 235 |
disease of cellular proliferation | 3.84e-15 | 239 |
carcinoma | 3.59e-10 | 106 |
cell type cancer | 4.05e-10 | 143 |
hematologic cancer | 3.34e-07 | 51 |
immune system cancer | 3.34e-07 | 51 |
organ system cancer | 4.62e-07 | 137 |