FFCP PHASE1:Hg19::chr10:18429658..18429670,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:18429658..18429670,+
|short_description=p14@CACNB2
|description=CAGE_peak_14_at_CACNB2_5end
|association_with_transcript=0bp_to_ENST00000352115,ENST000003...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=783 | |EntrezGene=783 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1402 | |HGNC=1402 | ||
|TSSclassifier=strong | |||
|UniProt=A6PVM6 | |UniProt=A6PVM6 | ||
|association_with_transcript=0bp_to_ENST00000352115,ENST00000377328_5end | |||
|cluster_id=chr10:18429658..18429670,+ | |||
|coexpression_cluster_id=C3004 | |||
|description=CAGE_peak_14_at_CACNB2_5end | |||
|id=chr10:18429658..18429670,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;6.17e-09;2!CL:0002253;6.17e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,6.42e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.53e-16;1 | |||
|ontology_enrichment_disease=DOID:171!6.17e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:171;4.32e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,4.52e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.68e-51!115;UBERON:0001049!4.69e-37!57;UBERON:0005068!4.69e-37!57;UBERON:0006241!4.69e-37!57;UBERON:0007135!4.69e-37!57;UBERON:0002616!2.31e-35!59;UBERON:0000073!6.65e-34!94;UBERON:0001016!6.65e-34!94;UBERON:0002780!1.03e-33!41;UBERON:0001890!1.03e-33!41;UBERON:0006240!1.03e-33!41;UBERON:0002346!1.34e-33!90;UBERON:0001017!2.14e-33!82;UBERON:0005743!3.61e-33!86;UBERON:0003080!1.06e-32!42;UBERON:0000955!1.14e-31!69;UBERON:0006238!1.14e-31!69;UBERON:0003075!3.76e-30!86;UBERON:0007284!3.76e-30!86;UBERON:0002020!2.09e-26!34;UBERON:0003528!2.09e-26!34;UBERON:0001893!4.70e-26!34;UBERON:0001869!7.92e-26!32;UBERON:0002791!8.59e-25!33;UBERON:0003056!9.77e-25!61;UBERON:0000924!1.18e-22!173;UBERON:0006601!1.18e-22!173;UBERON:0000033!3.57e-20!123;UBERON:0004121!3.74e-20!169;UBERON:0000153!1.20e-19!129;UBERON:0007811!1.20e-19!129;UBERON:0002619!1.09e-18!22;UBERON:0000956!5.01e-18!25;UBERON:0000203!5.01e-18!25;UBERON:0001950!1.30e-15!20;UBERON:0000922!4.65e-10!612;UBERON:0002308!5.36e-10!9;UBERON:0000125!5.36e-10!9;UBERON:0001872!2.62e-09!5;UBERON:0001894!2.84e-09!7;UBERON:0006222!2.84e-09!7;UBERON:0002050!6.69e-09!605;UBERON:0005423!6.69e-09!605;UBERON:0000369!7.52e-09!4;UBERON:0002435!7.52e-09!4;UBERON:0000204!7.52e-09!4;UBERON:0010082!7.52e-09!4;UBERON:0000481!1.61e-08!347;UBERON:0000468!1.81e-08!659;UBERON:0000923!2.23e-08!604;UBERON:0005291!2.23e-08!604;UBERON:0006598!2.23e-08!604;UBERON:0002532!2.23e-08!604;UBERON:0003296!2.42e-08!4;UBERON:0010133!2.42e-08!4;UBERON:0004111!4.92e-08!241;UBERON:0000025!1.16e-07!194;UBERON:0002420!1.81e-07!9;UBERON:0007245!1.81e-07!9;UBERON:0010009!1.81e-07!9;UBERON:0010011!1.81e-07!9;UBERON:0000454!1.81e-07!9;UBERON:0000475!2.14e-07!365;UBERON:0000200!2.73e-07!6;UBERON:0000483!4.11e-07!309;UBERON:0005383!4.19e-07!3;UBERON:0005382!4.19e-07!3;UBERON:0009663!4.27e-07!7;UBERON:0000467!5.22e-07!625;UBERON:0000480!5.86e-07!626;UBERON:0000119!6.54e-07!312;UBERON:0000477!6.75e-07!286;UBERON:0000062!6.92e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;1.53e-16;1!UBERON:0001153;1.53e-16;1!UBERON:0009854;1.53e-16;1!UBERON:0004907;3.88e-13;5!UBERON:0001255;6.17e-09;2!UBERON:0000007;6.17e-09;2!UBERON:0001556;6.17e-09;2!UBERON:0000160;3.27e-08;17!UBERON:0001155;1.05e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,2.63e-16,1;UBERON:0001153,2.63e-16,1;UBERON:0001045,2.63e-16,1;UBERON:0004907,4.96e-13,5;UBERON:0001255,4.34e-09,2;UBERON:0001556,4.34e-09,2;UBERON:0000007,4.70e-09,2;UBERON:0000160,4.03e-08,17;UBERON:0001046,8.19e-08,19;UBERON:0001155,1.20e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52456774533478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0.322260734604821,0.725083469571143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0.539617372749944,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0.398495976502139,1.10513566212459,0,0,0,0,0,0,0,1.67693789582787,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0.583209226766509,0,0.885741385813839,0.844175070377856,0,0.110579259931225,0.295547618953547,0.658156191461918,0,0,0.769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29833183845255,0,0.442287822516696,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.884612114798832,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.581934098930517,0,0.225980740780532,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.558564802544508,0,0,0.199679000498991,0,0,0.53746777989381,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0.137539436597234,0,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.517131825446202,0.39669780522807,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.500763722825999,1.14681839138014,0,0.310482014706917,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15104934173287,0.323474434190045,0.943595651135378,0,0,2.76347396132188,0.991486114072017,0,0,0,0,0,0,0.706521476061055,0,0,0.41023272848151,0.252071696221718,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0.781514011233092,0,0,0,0.270150338473579,0.781078098613847,0.413373593002368,0.317079050969534,0.546974809018219,0,0.496211178389294,0.527613733078862,0,0.535701835878287,0.336283722218824,0.606965604236632,1.59363533945908,0,0,0,0.0679697329768317,0.263091094251396,0,0,0.549451649953598,0.785577949580009,0,0,0,0,3.14496794377288,0,0,0,0,0,0.6828739083758,1.38251932362818,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0.218559560503957,0,4.6578181133242,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0.407948941145488,0,1.0580536810308,0,0.462175628631418,0,0.126166424835079,0,0,0.101988829741982,0,0.0918948995348449,0,0,0,0,0.310298987585686,0,0.23806443146374,0,0,0,0.12729431655633,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0.813792356631477,0.665756774185513,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52456774533478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0.322260734604821,0.725083469571143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0.539617372749944,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0.398495976502139,1.10513566212459,0,0,0,0,0,0,0,1.67693789582787,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0.583209226766509,0,0.885741385813839,0.844175070377856,0,0.110579259931225,0.295547618953547,0.658156191461918,0,0,0.769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29833183845255,0,0.442287822516696,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.884612114798832,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.581934098930517,0,0.225980740780532,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.558564802544508,0,0,0.199679000498991,0,0,0.53746777989381,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0.137539436597234,0,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.517131825446202,0.39669780522807,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.500763722825999,1.14681839138014,0,0.310482014706917,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15104934173287,0.323474434190045,0.943595651135378,0,0,2.76347396132188,0.991486114072017,0,0,0,0,0,0,0.706521476061055,0,0,0.41023272848151,0.252071696221718,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0.781514011233092,0,0,0,0.270150338473579,0.781078098613847,0.413373593002368,0.317079050969534,0.546974809018219,0,0.496211178389294,0.527613733078862,0,0.535701835878287,0.336283722218824,0.606965604236632,1.59363533945908,0,0,0,0.0679697329768317,0.263091094251396,0,0,0.549451649953598,0.785577949580009,0,0,0,0,3.14496794377288,0,0,0,0,0,0.6828739083758,1.38251932362818,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0.218559560503957,0,4.6578181133242,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0.407948941145488,0,1.0580536810308,0,0.462175628631418,0,0.126166424835079,0,0,0.101988829741982,0,0.0918948995348449,0,0,0,0,0.310298987585686,0,0.23806443146374,0,0,0,0.12729431655633,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0.813792356631477,0.665756774185513,0.402547587182052,0 | ||
|short_description=p14@CACNB2 | |||
}} | }} |
Latest revision as of 11:53, 17 September 2015
Short description: | p14@CACNB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_CACNB2_5end |
Coexpression cluster: | C3004_smooth_putamen_bladder_vagina_neuroectodermal_caudate_salivary |
Association with transcript: | 0bp_to_ENST00000352115, ENST00000377328_5end |
EntrezGene: | CACNB2 |
HGNC: | 1402 |
UniProt: | A6PVM6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 6.42e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 2.63e-16 | 1 |
caecum | 2.63e-16 | 1 |
midgut | 2.63e-16 | 1 |
lower digestive tract | 4.96e-13 | 5 |
urinary bladder | 4.34e-09 | 2 |
lower urinary tract | 4.34e-09 | 2 |
pituitary gland | 4.70e-09 | 2 |
intestine | 4.03e-08 | 17 |
hindgut | 8.19e-08 | 19 |
colon | 1.20e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.52e-07 | 10 |