FFCP PHASE1:Hg19::chr17:73636134..73636150,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:73636134..73636150,+
|short_description=p5@C17orf109
|description=CAGE_peak_5_at_C17orf109_5end
|association_with_transcript=-58bp_to_AF370408_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=643008 | |EntrezGene=643008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=40030 | |HGNC=40030 | ||
|TSSclassifier=strong | |||
|UniProt=Q71RC9 | |UniProt=Q71RC9 | ||
|association_with_transcript=-58bp_to_AF370408_5end | |||
|cluster_id=chr17:73636134..73636150,+ | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_5_at_C17orf109_5end | |||
|id=chr17:73636134..73636150,+ | |||
|ontology_enrichment_celltype=CL:0002541!7.77e-11!3;CL:0002537!5.26e-07!5;CL:1000415!5.54e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002537;1.40e-23;5!CL:0002541;8.40e-18;3!CL:0000349;1.10e-16;19!CL:0000313;6.65e-14;1!CL:0000159;1.36e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.40e-23,5;CL:0002541,9.14e-18,3;CL:0000349,1.14e-16,19;CL:0000313,5.85e-14,1;CL:0000159,1.28e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;6.65e-14;1!UBERON:0006242;1.51e-13;1 | |||
|ontology_enrichment_disease=DOID:5093!1.47e-13!4;DOID:1612!1.47e-13!4;DOID:299!2.85e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.50e-28;4!DOID:1612;1.50e-28;4!DOID:2152;6.65e-14;1!DOID:299;2.20e-12;25!DOID:4468;2.05e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.81e-28,4;DOID:1612,1.81e-28,4;DOID:2152,5.85e-14,1;DOID:299,2.28e-12,25;DOID:4468,2.12e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.63e-22!14;UBERON:0000158!2.63e-22!14;UBERON:0003124!8.28e-17!7;UBERON:0000478!1.80e-14!24;UBERON:0000476!7.77e-11!3;UBERON:0000920!7.77e-11!3;UBERON:0001723!4.11e-10!3;UBERON:0001033!4.11e-10!3;UBERON:0010056!4.11e-10!3;UBERON:0002110!4.52e-10!3;UBERON:0006242!4.52e-10!3;UBERON:0004119!9.66e-10!169;UBERON:0000925!9.66e-10!169;UBERON:0006595!9.66e-10!169;UBERON:0000161!1.96e-08!35;UBERON:0001987!4.64e-08!4;UBERON:0004340!4.64e-08!4;UBERON:0000305!4.72e-08!7;UBERON:0000077!9.18e-08!130;UBERON:0001007!1.13e-07!155;UBERON:0001555!1.13e-07!155;UBERON:0007026!1.13e-07!155;UBERON:0002294!2.22e-07!7;UBERON:0001173!2.22e-07!7;UBERON:0004912!2.22e-07!7;UBERON:0001008!2.29e-07!45;UBERON:0004871!4.90e-07!8;UBERON:0000341!5.89e-07!2;UBERON:0004175!7.02e-07!25;UBERON:0004923!9.00e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.19e-31;10!UBERON:0000158;1.19e-31;10!UBERON:0000478;1.09e-18;24!UBERON:0003124;8.40e-18;3!UBERON:0000920;8.40e-18;3!UBERON:0000305;4.89e-17;7!UBERON:0004911;6.65e-14;1!UBERON:0000310;8.12e-12;10!UBERON:0001443;8.54e-11;11!UBERON:0004909;1.36e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.64e-32,14;UBERON:0000158,3.64e-32,14;UBERON:0000478,1.12e-18,24;UBERON:0000920,9.14e-18,3;UBERON:0000305,4.89e-17,7;UBERON:0003124,8.84e-17,7;UBERON:0004871,5.50e-15,8;UBERON:0004911,5.85e-14,1;UBERON:0000310,8.74e-12,10;UBERON:0001443,9.13e-11,11;UBERON:0004909,1.28e-07,2 | |||
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| ||
|short_description=p5@C17orf109 | |||
}} | }} |
Latest revision as of 11:40, 17 September 2015
Short description: | p5@C17orf109 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_C17orf109_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | -58bp_to_AF370408_5end |
EntrezGene: | C17orf109 |
HGNC: | 40030 |
UniProt: | Q71RC9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.40e-23 | 5 |
chorionic membrane mesenchymal stem cell | 9.14e-18 | 3 |
extraembryonic cell | 1.14e-16 | 19 |
serous secreting cell | 5.85e-14 | 1 |
seromucus secreting cell | 1.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.64e-32 | 14 |
membranous layer | 3.64e-32 | 14 |
extraembryonic structure | 1.12e-18 | 24 |
egg chorion | 9.14e-18 | 3 |
amnion | 4.89e-17 | 7 |
chorion | 8.84e-17 | 7 |
somatic layer of lateral plate mesoderm | 5.50e-15 | 8 |
epithelium of female gonad | 5.85e-14 | 1 |
breast | 8.74e-12 | 10 |
chest | 9.13e-11 | 11 |
epithelium of gonad | 1.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.81e-28 | 4 |
breast cancer | 1.81e-28 | 4 |
ovary epithelial cancer | 5.85e-14 | 1 |
adenocarcinoma | 2.28e-12 | 25 |
clear cell adenocarcinoma | 2.12e-07 | 2 |