FFCP PHASE1:Hg19::chr10:180416..180429,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10771 | |EntrezGene=10771 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16966 | |HGNC=16966 | ||
|TSSclassifier=strong | |||
|UniProt=Q15326,Q5VUI0,B7Z293,Q5BJG6,Q5UGI2,B7Z2J6,Q8N4B3 | |UniProt=Q15326,Q5VUI0,B7Z293,Q5BJG6,Q5UGI2,B7Z2J6,Q8N4B3 | ||
|association_with_transcript=0bp_to_ENST00000309776,ENST00000381602,ENST00000397962,NM_001202465,NM_001202466,NM_212479,uc001ifk.2,uc010pzt.1,uc010pzu.1,uc010pzv.1,uc010pzw.1_5end | |association_with_transcript=0bp_to_ENST00000309776,ENST00000381602,ENST00000397962,NM_001202465,NM_001202466,NM_212479,uc001ifk.2,uc010pzt.1,uc010pzu.1,uc010pzv.1,uc010pzw.1_5end | ||
|cluster_id=chr10:180416..180429,+ | |||
|coexpression_cluster_id=C84 | |coexpression_cluster_id=C84 | ||
|description=CAGE_peak_9_at_ZMYND11_5end | |description=CAGE_peak_9_at_ZMYND11_5end | ||
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|ontology_enrichment_celltype=CL:0000047!4.11e-08!8 | |ontology_enrichment_celltype=CL:0000047!4.11e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000047;2.56e-13;2!CL:0002319;3.08e-10;25!CL:0000540;9.67e-10;6!CL:0000404;9.67e-10;6!CL:0000039;7.17e-09;7!CL:0000586;7.17e-09;7!CL:0002032;2.91e-07;1!CL:0000557;2.91e-07;1!CL:0002563;3.91e-07;4 | |ontology_enrichment_celltype_v019=CL:0000047;2.56e-13;2!CL:0002319;3.08e-10;25!CL:0000540;9.67e-10;6!CL:0000404;9.67e-10;6!CL:0000039;7.17e-09;7!CL:0000586;7.17e-09;7!CL:0002032;2.91e-07;1!CL:0000557;2.91e-07;1!CL:0002563;3.91e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.59e-19,8;CL:0002319,2.84e-10,25;CL:0000540,8.21e-10,6;CL:0000031,8.21e-10,6;CL:0000404,8.21e-10,6;CL:0000039,7.18e-09,7;CL:0000586,7.18e-09,7;CL:0002563,4.22e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000031;9.67e-10;6 | |ontology_enrichment_development_v019=CL:0000031;9.67e-10;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1799;8.53e-08;1!DOID:10165;8.53e-08;1!DOID:1798;8.53e-08;1!DOID:3095;6.70e-07;22!DOID:2994;6.70e-07;22 | |ontology_enrichment_disease_v019=DOID:1799;8.53e-08;1!DOID:10165;8.53e-08;1!DOID:1798;8.53e-08;1!DOID:3095;6.70e-07;22!DOID:2994;6.70e-07;22 | ||
|ontology_enrichment_disease_v019_2=DOID:1799,8.54e-08,1;DOID:10165,8.54e-08,1;DOID:1798,8.54e-08,1;DOID:3095,7.15e-07,22;DOID:2994,7.15e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!6.17e-22!94;UBERON:0001016!6.17e-22!94;UBERON:0001017!1.03e-20!82;UBERON:0005743!1.91e-19!86;UBERON:0001049!1.98e-17!57;UBERON:0005068!1.98e-17!57;UBERON:0006241!1.98e-17!57;UBERON:0007135!1.98e-17!57;UBERON:0002346!2.15e-16!90;UBERON:0002780!4.89e-16!41;UBERON:0001890!4.89e-16!41;UBERON:0006240!4.89e-16!41;UBERON:0002616!1.60e-15!59;UBERON:0003080!2.36e-15!42;UBERON:0003075!9.69e-15!86;UBERON:0007284!9.69e-15!86;UBERON:0002020!2.02e-14!34;UBERON:0003528!2.02e-14!34;UBERON:0001893!2.87e-14!34;UBERON:0000955!1.01e-13!69;UBERON:0006238!1.01e-13!69;UBERON:0002791!1.50e-13!33;UBERON:0001869!2.18e-13!32;UBERON:0000956!4.64e-11!25;UBERON:0000203!4.64e-11!25;UBERON:0000924!1.45e-10!173;UBERON:0006601!1.45e-10!173;UBERON:0003056!1.94e-10!61;UBERON:0007023!5.04e-10!115;UBERON:0001950!7.27e-10!20;UBERON:0002619!1.66e-09!22;UBERON:0004121!2.07e-09!169 | |ontology_enrichment_uberon=UBERON:0000073!6.17e-22!94;UBERON:0001016!6.17e-22!94;UBERON:0001017!1.03e-20!82;UBERON:0005743!1.91e-19!86;UBERON:0001049!1.98e-17!57;UBERON:0005068!1.98e-17!57;UBERON:0006241!1.98e-17!57;UBERON:0007135!1.98e-17!57;UBERON:0002346!2.15e-16!90;UBERON:0002780!4.89e-16!41;UBERON:0001890!4.89e-16!41;UBERON:0006240!4.89e-16!41;UBERON:0002616!1.60e-15!59;UBERON:0003080!2.36e-15!42;UBERON:0003075!9.69e-15!86;UBERON:0007284!9.69e-15!86;UBERON:0002020!2.02e-14!34;UBERON:0003528!2.02e-14!34;UBERON:0001893!2.87e-14!34;UBERON:0000955!1.01e-13!69;UBERON:0006238!1.01e-13!69;UBERON:0002791!1.50e-13!33;UBERON:0001869!2.18e-13!32;UBERON:0000956!4.64e-11!25;UBERON:0000203!4.64e-11!25;UBERON:0000924!1.45e-10!173;UBERON:0006601!1.45e-10!173;UBERON:0003056!1.94e-10!61;UBERON:0007023!5.04e-10!115;UBERON:0001950!7.27e-10!20;UBERON:0002619!1.66e-09!22;UBERON:0004121!2.07e-09!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;7.48e-13;2!UBERON:0002757;7.48e-13;2!UBERON:0010134;7.48e-13;2!UBERON:0005408;7.48e-13;2!UBERON:0001899;7.48e-13;2!UBERON:0002791;2.50e-10;32!UBERON:0001869;2.51e-10;32!UBERON:0001950;4.69e-10;20!UBERON:0001893;2.99e-09;34!UBERON:0002619;3.93e-09;22!UBERON:0005383;4.40e-09;3!UBERON:0005382;4.40e-09;3!UBERON:0003528;6.75e-09;34!UBERON:0002020;6.75e-09;34!UBERON:0002780;1.17e-08;41!UBERON:0001890;1.17e-08;41!UBERON:0001017;2.31e-08;75!UBERON:0000956;5.17e-08;25!UBERON:0000203;5.17e-08;25!UBERON:0001016;1.53e-07;83!UBERON:0002581;2.91e-07;1!UBERON:0001874;2.91e-07;1!UBERON:0001242;3.91e-07;4!UBERON:0001262;3.91e-07;4!UBERON:0004786;3.91e-07;4!UBERON:0004808;3.91e-07;4!UBERON:0001277;3.91e-07;4!UBERON:0000369;5.14e-07;4!UBERON:0002435;5.14e-07;4!UBERON:0000204;5.14e-07;4!UBERON:0003296;7.48e-07;4!UBERON:0010133;7.48e-07;4!UBERON:0002784;7.48e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0001905;7.48e-13;2!UBERON:0002757;7.48e-13;2!UBERON:0010134;7.48e-13;2!UBERON:0005408;7.48e-13;2!UBERON:0001899;7.48e-13;2!UBERON:0002791;2.50e-10;32!UBERON:0001869;2.51e-10;32!UBERON:0001950;4.69e-10;20!UBERON:0001893;2.99e-09;34!UBERON:0002619;3.93e-09;22!UBERON:0005383;4.40e-09;3!UBERON:0005382;4.40e-09;3!UBERON:0003528;6.75e-09;34!UBERON:0002020;6.75e-09;34!UBERON:0002780;1.17e-08;41!UBERON:0001890;1.17e-08;41!UBERON:0001017;2.31e-08;75!UBERON:0000956;5.17e-08;25!UBERON:0000203;5.17e-08;25!UBERON:0001016;1.53e-07;83!UBERON:0002581;2.91e-07;1!UBERON:0001874;2.91e-07;1!UBERON:0001242;3.91e-07;4!UBERON:0001262;3.91e-07;4!UBERON:0004786;3.91e-07;4!UBERON:0004808;3.91e-07;4!UBERON:0001277;3.91e-07;4!UBERON:0000369;5.14e-07;4!UBERON:0002435;5.14e-07;4!UBERON:0000204;5.14e-07;4!UBERON:0003296;7.48e-07;4!UBERON:0010133;7.48e-07;4!UBERON:0002784;7.48e-07;4 | ||
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| ||
|short_description=p9@ZMYND11 | |short_description=p9@ZMYND11 | ||
}} | }} |
Latest revision as of 11:40, 17 September 2015
Short description: | p9@ZMYND11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ZMYND11_5end |
Coexpression cluster: | C84_choriocarcinoma_pancreatic_Wilms_Mallassezderived_thymus_salivary_colon |
Association with transcript: | 0bp_to_ENST00000309776, ENST00000381602, ENST00000397962, NM_001202465, NM_001202466, NM_212479, uc001ifk.2, uc010pzt.1, uc010pzu.1, uc010pzv.1, uc010pzw.1_5end |
EntrezGene: | ZMYND11 |
HGNC: | 16966 |
UniProt: | Q15326Q5VUI0B7Z293Q5BJG6Q5UGI2B7Z2J6Q8N4B3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.59e-19 | 8 |
neural cell | 2.84e-10 | 25 |
neuron | 8.21e-10 | 6 |
neuroblast | 8.21e-10 | 6 |
electrically signaling cell | 8.21e-10 | 6 |
germ line cell | 7.18e-09 | 7 |
germ cell | 7.18e-09 | 7 |
intestinal epithelial cell | 4.22e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 8.54e-08 | 1 |
endocrine pancreas cancer | 8.54e-08 | 1 |
pancreatic endocrine carcinoma | 8.54e-08 | 1 |
germ cell and embryonal cancer | 7.15e-07 | 22 |
germ cell cancer | 7.15e-07 | 22 |