FFCP PHASE1:Hg19::chr10:180416..180429,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:180416..180429,+
|short_description=p9@ZMYND11
|description=CAGE_peak_9_at_ZMYND11_5end
|association_with_transcript=0bp_to_ENST00000309776,ENST0000038160...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10771 | |EntrezGene=10771 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16966 | |HGNC=16966 | ||
|UniProt=Q15326, | |TSSclassifier=strong | ||
|UniProt=Q15326,Q5VUI0,B7Z293,Q5BJG6,Q5UGI2,B7Z2J6,Q8N4B3 | |||
|association_with_transcript=0bp_to_ENST00000309776,ENST00000381602,ENST00000397962,NM_001202465,NM_001202466,NM_212479,uc001ifk.2,uc010pzt.1,uc010pzu.1,uc010pzv.1,uc010pzw.1_5end | |||
|cluster_id=chr10:180416..180429,+ | |||
|coexpression_cluster_id=C84 | |||
|description=CAGE_peak_9_at_ZMYND11_5end | |||
|id=chr10:180416..180429,+ | |||
|ontology_enrichment_celltype=CL:0000047!4.11e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000047;2.56e-13;2!CL:0002319;3.08e-10;25!CL:0000540;9.67e-10;6!CL:0000404;9.67e-10;6!CL:0000039;7.17e-09;7!CL:0000586;7.17e-09;7!CL:0002032;2.91e-07;1!CL:0000557;2.91e-07;1!CL:0002563;3.91e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.59e-19,8;CL:0002319,2.84e-10,25;CL:0000540,8.21e-10,6;CL:0000031,8.21e-10,6;CL:0000404,8.21e-10,6;CL:0000039,7.18e-09,7;CL:0000586,7.18e-09,7;CL:0002563,4.22e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000031;9.67e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;8.53e-08;1!DOID:10165;8.53e-08;1!DOID:1798;8.53e-08;1!DOID:3095;6.70e-07;22!DOID:2994;6.70e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,8.54e-08,1;DOID:10165,8.54e-08,1;DOID:1798,8.54e-08,1;DOID:3095,7.15e-07,22;DOID:2994,7.15e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!6.17e-22!94;UBERON:0001016!6.17e-22!94;UBERON:0001017!1.03e-20!82;UBERON:0005743!1.91e-19!86;UBERON:0001049!1.98e-17!57;UBERON:0005068!1.98e-17!57;UBERON:0006241!1.98e-17!57;UBERON:0007135!1.98e-17!57;UBERON:0002346!2.15e-16!90;UBERON:0002780!4.89e-16!41;UBERON:0001890!4.89e-16!41;UBERON:0006240!4.89e-16!41;UBERON:0002616!1.60e-15!59;UBERON:0003080!2.36e-15!42;UBERON:0003075!9.69e-15!86;UBERON:0007284!9.69e-15!86;UBERON:0002020!2.02e-14!34;UBERON:0003528!2.02e-14!34;UBERON:0001893!2.87e-14!34;UBERON:0000955!1.01e-13!69;UBERON:0006238!1.01e-13!69;UBERON:0002791!1.50e-13!33;UBERON:0001869!2.18e-13!32;UBERON:0000956!4.64e-11!25;UBERON:0000203!4.64e-11!25;UBERON:0000924!1.45e-10!173;UBERON:0006601!1.45e-10!173;UBERON:0003056!1.94e-10!61;UBERON:0007023!5.04e-10!115;UBERON:0001950!7.27e-10!20;UBERON:0002619!1.66e-09!22;UBERON:0004121!2.07e-09!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;7.48e-13;2!UBERON:0002757;7.48e-13;2!UBERON:0010134;7.48e-13;2!UBERON:0005408;7.48e-13;2!UBERON:0001899;7.48e-13;2!UBERON:0002791;2.50e-10;32!UBERON:0001869;2.51e-10;32!UBERON:0001950;4.69e-10;20!UBERON:0001893;2.99e-09;34!UBERON:0002619;3.93e-09;22!UBERON:0005383;4.40e-09;3!UBERON:0005382;4.40e-09;3!UBERON:0003528;6.75e-09;34!UBERON:0002020;6.75e-09;34!UBERON:0002780;1.17e-08;41!UBERON:0001890;1.17e-08;41!UBERON:0001017;2.31e-08;75!UBERON:0000956;5.17e-08;25!UBERON:0000203;5.17e-08;25!UBERON:0001016;1.53e-07;83!UBERON:0002581;2.91e-07;1!UBERON:0001874;2.91e-07;1!UBERON:0001242;3.91e-07;4!UBERON:0001262;3.91e-07;4!UBERON:0004786;3.91e-07;4!UBERON:0004808;3.91e-07;4!UBERON:0001277;3.91e-07;4!UBERON:0000369;5.14e-07;4!UBERON:0002435;5.14e-07;4!UBERON:0000204;5.14e-07;4!UBERON:0003296;7.48e-07;4!UBERON:0010133;7.48e-07;4!UBERON:0002784;7.48e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.46e-20,81;UBERON:0001016,7.10e-20,89;UBERON:0002780,1.00e-12,41;UBERON:0001890,1.00e-12,41;UBERON:0003080,1.00e-12,41;UBERON:0006240,1.00e-12,41;UBERON:0001905,1.64e-12,2;UBERON:0002757,1.64e-12,2;UBERON:0010134,1.64e-12,2;UBERON:0005408,1.64e-12,2;UBERON:0001899,1.64e-12,2;UBERON:0002791,8.23e-11,32;UBERON:0001869,8.23e-11,32;UBERON:0000955,3.63e-10,68;UBERON:0006238,3.63e-10,68;UBERON:0003528,3.98e-10,34;UBERON:0002020,3.98e-10,34;UBERON:0001893,3.98e-10,34;UBERON:0001950,4.08e-10,20;UBERON:0003056,7.62e-10,61;UBERON:0004121,8.61e-10,171;UBERON:0000924,8.61e-10,171;UBERON:0006601,8.61e-10,171;UBERON:0011216,1.62e-09,223;UBERON:0000073,1.63e-09,53;UBERON:0002616,1.63e-09,53;UBERON:0002619,3.46e-09,22;UBERON:0005383,3.98e-09,3;UBERON:0005382,3.98e-09,3;UBERON:0001049,6.36e-09,56;UBERON:0005068,6.36e-09,56;UBERON:0006241,6.36e-09,56;UBERON:0007135,6.36e-09,56;UBERON:0000956,4.63e-08,25;UBERON:0000203,4.63e-08,25;UBERON:0002346,9.71e-08,86;UBERON:0001874,2.50e-07,1;UBERON:0002581,3.01e-07,1;UBERON:0001242,4.22e-07,4;UBERON:0001262,4.22e-07,4;UBERON:0004786,4.22e-07,4;UBERON:0004808,4.22e-07,4;UBERON:0001277,4.22e-07,4;UBERON:0000369,4.77e-07,4;UBERON:0002435,4.77e-07,4;UBERON:0000204,4.77e-07,4;UBERON:0010082,4.77e-07,4;UBERON:0003075,7.38e-07,82;UBERON:0007284,7.38e-07,82 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0.85870796139317,0.136874425072884,0.627713197974014,0.0764134057479513,0.0821005894499457,0.236132343941038,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0.196709770113833,0,0,0,0.651844533267181,0.473447805734733,0,0,0.294605907474837,0.221533894583621,0,0.128091319725675,0.130059347559878,0,0,0,0.296573126324121,0.267540828089713,0,0,0,0,0.506039384039006,0.318565414324097,0.651083453856419,0,0.301150238155546,0.511946444617674,0,0.473554504088034,0.821127996921047,0.604820229674197,0.802320587350522,0.868946423296794,0,0,0,0,0,0,0,0,0,0.221729397462564,0.351339142772504,0.458426764241994,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.397227542439656,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0.234321431833797,0,0,0,0.23486899728753,0,0,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0.375355559615893,0,0,0,0,0.226864366320042,0,0,0.211931901159562,0,0.103052529238439,0,0,0.168776332241266,0.0974370051611986,0,0.276149695926898,0,0,0,0,0,0,0,0,0.265059536642971,0,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0.441463099414651,1.10689594688802,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.352193736052904,0.207328115540772,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.710783897485092,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0.591092280605782,0.215627574859517,0.256686072559497,1.27047312111232,7.8083912314573,2.31986643833309,2.34522771468088,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.61384789315225,0,0.384417447767103,0.511707249066704,0.482561763430822,0,0,0.177561725313127,0,0,0,0.604297247958111,0,0,0.459257792658427,0.364182336013434,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0.261435451024901,0,0,0,0,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0.214840489736547,0,0.0852266274161009,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0,0.286822704408103,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0.962479855263359,0,0,0,0.426851060090485,0.956557636372934,0.399158742865633,0.191505370132367,0.423347165447766,0.649243880549111,0.280797178113459,0.228234679033192,0,0,0.169291777801603,0,0,0,0,0.614481528616916,0,0.333698283423817,0,0,0,0.540911356951966,0,0,0.18714054040822,0,0.242721043499027,0,0,0,0,0,0,0.281338832821026,0.111308705022906,0,1.05562704063997,0,0,0.251932747854276,0,0,0.311039587661807,0,0,4.60415133204185,0.197286811273867,0,0,0,0.927680981618513,0,0.520855522170466,0.174919999992391,0,0,0,0,0,0.583209226766509,0.694499979733169,3.54296554325536,0.964771509003264,0,0.331737779793674,0.295547618953547,1.31631238292384,0,0,0.153900517007594,0,5.30296980092538,12.0275243509095,49.9777910841237,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,1.11255605286265,0,0,11.5909518575831,0,0,0.0884575645033392,0,0.296521128680622,0.370691816839509,0.208843899010911,0.337005664903385,0,0.702793337176017,0,0,0,0,0,7.34574627913176,0.31593289814244,0.300646838828985,0.311064574191741,0,0,0,0,0,0.554698692052555,0,0.0979923974143777,0,0.34945333648406,0,0,0,0.0821154570532092,0.193978032976839,0.353024506766001,0.451961481561065,0.274083849293502,0,0.949661939338181,0.391102765469606,0,0,0,0,0.572682980829578,0.171594997861965,0,0.124252535565433,0,0,0,0,0,0,0,1.27746588066972,0,0.525774708558629,0,0.229160424011684,0.717873024576814,0,0,0,0.201550417460179,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0.0984274815147488,0,0,0.272406812223151,0.321506296930038,0.687697182986169,0.83088067605837,0,0,0.850493793212345,0,0,0.262272940674991,0,0,0.191915197319445,0,0,0,0.542999601753713,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0.904980694530854,0.52893040697076,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0.327872630709804,0,0,1.34228891392159,0.250381861413,0,0.110929051536852,0.496771223531068,1.10678907948985,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0.521988583930423,0,0,0,0,0,0.219284049578707,0,0.38582807654183,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0,1.15104934173287,0.431299245586727,0.471797825567689,0.327628914576042,0.169732529954025,1.062874600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| ||
|short_description=p9@ZMYND11 | |||
}} | }} |
Latest revision as of 11:40, 17 September 2015
Short description: | p9@ZMYND11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ZMYND11_5end |
Coexpression cluster: | C84_choriocarcinoma_pancreatic_Wilms_Mallassezderived_thymus_salivary_colon |
Association with transcript: | 0bp_to_ENST00000309776, ENST00000381602, ENST00000397962, NM_001202465, NM_001202466, NM_212479, uc001ifk.2, uc010pzt.1, uc010pzu.1, uc010pzv.1, uc010pzw.1_5end |
EntrezGene: | ZMYND11 |
HGNC: | 16966 |
UniProt: | Q15326Q5VUI0B7Z293Q5BJG6Q5UGI2B7Z2J6Q8N4B3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.59e-19 | 8 |
neural cell | 2.84e-10 | 25 |
neuron | 8.21e-10 | 6 |
neuroblast | 8.21e-10 | 6 |
electrically signaling cell | 8.21e-10 | 6 |
germ line cell | 7.18e-09 | 7 |
germ cell | 7.18e-09 | 7 |
intestinal epithelial cell | 4.22e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 8.54e-08 | 1 |
endocrine pancreas cancer | 8.54e-08 | 1 |
pancreatic endocrine carcinoma | 8.54e-08 | 1 |
germ cell and embryonal cancer | 7.15e-07 | 22 |
germ cell cancer | 7.15e-07 | 22 |