FFCP PHASE1:Hg19::chr16:67596384..67596411,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:67596384..67596411,+ to FFCP PHASE1:Hg19::chr16:67596384..67596411,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10664 | |EntrezGene=10664 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13723 | |HGNC=13723 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-52bp_to_uc002etl.2,uc010cek.2_5end | |||
|cluster_id=chr16:67596384..67596411,+ | |||
|description=CAGE_peak_3_at_CTCF_5end | |||
|id=chr16:67596384..67596411,+ | |||
|ontology_enrichment_celltype=CL:0000542!9.26e-12!53;CL:0000051!9.26e-12!53;CL:0000838!2.62e-11!52;CL:0000037!6.18e-10!172;CL:0000566!6.18e-10!172;CL:0002087!1.46e-09!119;CL:0000988!2.16e-09!182;CL:0000738!3.30e-09!140;CL:0002032!5.72e-09!165;CL:0000837!5.72e-09!165;CL:0002031!2.87e-08!124;CL:0000945!1.49e-07!24;CL:0000826!1.49e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.35e-07;24!CL:0000542;4.77e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,6.17e-12,53;CL:0000051,6.17e-12,53;CL:0000838,1.82e-11,52;CL:0000037,3.84e-09,168;CL:0002087,6.81e-09,115;CL:0000988,7.85e-09,177;CL:0000738,1.01e-08,136;CL:0002032,2.89e-08,161;CL:0000837,2.89e-08,161;CL:0000945,4.51e-08,24;CL:0000826,4.51e-08,24;CL:0002031,2.01e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;4.77e-07;53 | |||
|ontology_enrichment_disease=DOID:162!1.61e-11!235;DOID:14566!7.34e-11!239;DOID:305!7.97e-08!106;DOID:2531!4.79e-07!51;DOID:0060083!4.79e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,7.14e-11,235;DOID:14566,2.18e-10,239;DOID:305,2.57e-07,106;DOID:2531,9.97e-07,51;DOID:0060083,9.97e-07,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@CTCF | |||
}} | }} |
Latest revision as of 11:38, 17 September 2015
Short description: | p3@CTCF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CTCF_5end |
Coexpression cluster: | NA |
Association with transcript: | -52bp_to_uc002etl.2, uc010cek.2_5end |
EntrezGene: | CTCF |
HGNC: | 13723 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 6.17e-12 | 53 |
common lymphoid progenitor | 6.17e-12 | 53 |
lymphoid lineage restricted progenitor cell | 1.82e-11 | 52 |
hematopoietic stem cell | 3.84e-09 | 168 |
nongranular leukocyte | 6.81e-09 | 115 |
hematopoietic cell | 7.85e-09 | 177 |
leukocyte | 1.01e-08 | 136 |
hematopoietic oligopotent progenitor cell | 2.89e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.89e-08 | 161 |
lymphocyte of B lineage | 4.51e-08 | 24 |
pro-B cell | 4.51e-08 | 24 |
hematopoietic lineage restricted progenitor cell | 2.01e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.14e-11 | 235 |
disease of cellular proliferation | 2.18e-10 | 239 |
carcinoma | 2.57e-07 | 106 |
hematologic cancer | 9.97e-07 | 51 |
immune system cancer | 9.97e-07 | 51 |