FFCP PHASE1:Hg19::chr1:155147046..155147077,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80128 | |EntrezGene=80128 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19019 | |HGNC=19019 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VT61 | |UniProt=Q5VT61 | ||
|association_with_transcript=0bp_to_ENST00000464760,uc001fhv.3,uc009wpf.2,uc009wpg.1_5end | |association_with_transcript=0bp_to_ENST00000464760,uc001fhv.3,uc009wpf.2,uc009wpg.1_5end | ||
|cluster_id=chr1:155147046..155147077,+ | |||
|description=CAGE_peak_2_at_TRIM46_5end | |description=CAGE_peak_2_at_TRIM46_5end | ||
|id=chr1:155147046..155147077,+ | |id=chr1:155147046..155147077,+ | ||
|ontology_enrichment_celltype=CL:0000071;3.20e-09;18!CL:0000115;6.99e-09;36!CL:0002139;1.88e-08;24!CL:1000449;1.00e-07;15!CL:1000497;4.64e-07;17!CL:0002518;4.64e-07;17 | |ontology_enrichment_celltype=CL:0000222!4.62e-10!119;CL:0000115!2.23e-09!35;CL:0002078!8.61e-09!44;CL:0000071!3.19e-08!18;CL:0002546!3.19e-08!18;CL:0002139!4.24e-08!24;CL:0000055!4.63e-07!180 | ||
| | |ontology_enrichment_celltype_v019=CL:0000071;3.20e-09;18!CL:0000115;6.99e-09;36!CL:0002139;1.88e-08;24!CL:1000449;1.00e-07;15!CL:1000497;4.64e-07;17!CL:0002518;4.64e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,8.97e-11,36;CL:0002078,1.34e-09,45;CL:0000071,2.52e-09,18;CL:0002546,2.52e-09,18;CL:0002139,2.34e-08,24;CL:1000449,7.85e-08,15;CL:0000222,9.59e-08,121;CL:1000497,3.70e-07,17;CL:0002518,3.70e-07,17 | |||
|ontology_enrichment_development_v019=CL:0002546;3.20e-09;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001893;5.69e-17;34!UBERON:0001869;8.85e-17;32!UBERON:0002791;1.85e-16;32!UBERON:0003528;6.24e-16;34!UBERON:0002020;6.24e-16;34!UBERON:0000956;3.16e-15;25!UBERON:0000203;3.16e-15;25!UBERON:0002780;4.21e-14;41!UBERON:0001890;4.21e-14;41!UBERON:0002619;1.45e-13;22!UBERON:0000073;1.63e-13;53!UBERON:0002616;1.63e-13;53!UBERON:0001950;3.62e-13;20!UBERON:0000955;1.34e-09;68!UBERON:0001017;2.40e-09;75!UBERON:0004638;3.20e-09;18!UBERON:0001986;3.20e-09;18!UBERON:0004852;3.20e-09;18!UBERON:0000487;1.53e-08;22!UBERON:0001016;1.94e-08;83!UBERON:0006555;1.00e-07;15!UBERON:0004819;1.00e-07;15!UBERON:0001285;1.00e-07;15!UBERON:0007684;1.00e-07;15!UBERON:0006914;1.25e-07;25!UBERON:0003914;8.06e-07;74 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.71e-21!94;UBERON:0001016!1.71e-21!94;UBERON:0005743!1.50e-19!86;UBERON:0000119!4.34e-19!312;UBERON:0000483!4.44e-19!309;UBERON:0003075!1.80e-18!86;UBERON:0007284!1.80e-18!86;UBERON:0001017!2.49e-18!82;UBERON:0002346!3.54e-18!90;UBERON:0002616!5.13e-18!59;UBERON:0001049!9.70e-18!57;UBERON:0005068!9.70e-18!57;UBERON:0006241!9.70e-18!57;UBERON:0007135!9.70e-18!57;UBERON:0003056!2.47e-17!61;UBERON:0000025!5.96e-17!194;UBERON:0001893!5.10e-16!34;UBERON:0002791!1.84e-15!33;UBERON:0002780!2.53e-15!41;UBERON:0001890!2.53e-15!41;UBERON:0006240!2.53e-15!41;UBERON:0000955!2.76e-15!69;UBERON:0006238!2.76e-15!69;UBERON:0002020!3.45e-15!34;UBERON:0003528!3.45e-15!34;UBERON:0001869!3.57e-15!32;UBERON:0003080!2.04e-14!42;UBERON:0000924!3.43e-14!173;UBERON:0006601!3.43e-14!173;UBERON:0004121!3.63e-14!169;UBERON:0000477!1.15e-13!286;UBERON:0002049!4.10e-13!79;UBERON:0007798!4.10e-13!79;UBERON:0004111!1.47e-12!241;UBERON:0000956!1.72e-12!25;UBERON:0000203!1.72e-12!25;UBERON:0000153!6.58e-12!129;UBERON:0007811!6.58e-12!129;UBERON:0004535!6.86e-12!110;UBERON:0000033!1.64e-11!123;UBERON:0002619!2.97e-11!22;UBERON:0001950!7.61e-11!20;UBERON:0001009!1.18e-10!113;UBERON:0001981!2.84e-10!60;UBERON:0007500!2.84e-10!60;UBERON:0004537!2.84e-10!60;UBERON:0006965!2.84e-10!60;UBERON:0000055!4.98e-10!69;UBERON:0001986!3.19e-08!18;UBERON:0004638!3.19e-08!18;UBERON:0004852!3.19e-08!18;UBERON:0000475!1.24e-07!365;UBERON:0001637!1.25e-07!42;UBERON:0003509!1.25e-07!42;UBERON:0004572!1.25e-07!42;UBERON:0000487!1.51e-07!22;UBERON:0006914!1.56e-07!25;UBERON:0004872!2.88e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.69e-17;34!UBERON:0001869;8.85e-17;32!UBERON:0002791;1.85e-16;32!UBERON:0003528;6.24e-16;34!UBERON:0002020;6.24e-16;34!UBERON:0000956;3.16e-15;25!UBERON:0000203;3.16e-15;25!UBERON:0002780;4.21e-14;41!UBERON:0001890;4.21e-14;41!UBERON:0002619;1.45e-13;22!UBERON:0000073;1.63e-13;53!UBERON:0002616;1.63e-13;53!UBERON:0001950;3.62e-13;20!UBERON:0000955;1.34e-09;68!UBERON:0001017;2.40e-09;75!UBERON:0004638;3.20e-09;18!UBERON:0001986;3.20e-09;18!UBERON:0004852;3.20e-09;18!UBERON:0000487;1.53e-08;22!UBERON:0001016;1.94e-08;83!UBERON:0006555;1.00e-07;15!UBERON:0004819;1.00e-07;15!UBERON:0001285;1.00e-07;15!UBERON:0007684;1.00e-07;15!UBERON:0006914;1.25e-07;25!UBERON:0003914;8.06e-07;74 | |||
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| ||
|short_description=p2@TRIM46 | |short_description=p2@TRIM46 | ||
}} | }} |
Latest revision as of 11:34, 17 September 2015
Short description: | p2@TRIM46 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TRIM46_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000464760, uc001fhv.3, uc009wpf.2, uc009wpg.1_5end |
EntrezGene: | TRIM46 |
HGNC: | 19019 |
UniProt: | Q5VT61 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 8.97e-11 | 36 |
meso-epithelial cell | 1.34e-09 | 45 |
blood vessel endothelial cell | 2.52e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.52e-09 | 18 |
endothelial cell of vascular tree | 2.34e-08 | 24 |
epithelial cell of nephron | 7.85e-08 | 15 |
mesodermal cell | 9.59e-08 | 121 |
kidney cell | 3.70e-07 | 17 |
kidney epithelial cell | 3.70e-07 | 17 |