FFCP PHASE1:Hg19::chr10:17496669..17496680,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338596 | |EntrezGene=338596 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23317 | |HGNC=23317 | ||
|TSSclassifier=strong | |||
|UniProt=B0YJ96 | |UniProt=B0YJ96 | ||
|association_with_transcript=-283bp_to_ENST00000377610_5end | |association_with_transcript=-283bp_to_ENST00000377610_5end | ||
|cluster_id=chr10:17496669..17496680,- | |||
|description=CAGE_peak_9_at_ST8SIA6_5end | |description=CAGE_peak_9_at_ST8SIA6_5end | ||
|id=chr10:17496669..17496680,- | |id=chr10:17496669..17496680,- | ||
|ontology_enrichment_celltype=CL:0000148!2.68e-12!10;CL:0000541!2.68e-12!10;CL:0002274!1.31e-11!5;CL:0000457!1.31e-11!5;CL:0002191!1.31e-11!5;CL:0000097!1.31e-11!5;CL:0000831!1.31e-11!5;CL:0002028!1.31e-11!5;CL:0000710!8.14e-10!20;CL:0000147!1.46e-08!14;CL:0000075!6.57e-07!27;CL:0000988!9.56e-07!182 | |ontology_enrichment_celltype=CL:0000148!2.68e-12!10;CL:0000541!2.68e-12!10;CL:0002274!1.31e-11!5;CL:0000457!1.31e-11!5;CL:0002191!1.31e-11!5;CL:0000097!1.31e-11!5;CL:0000831!1.31e-11!5;CL:0002028!1.31e-11!5;CL:0000710!8.14e-10!20;CL:0000147!1.46e-08!14;CL:0000075!6.57e-07!27;CL:0000988!9.56e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000148;3.66e-29;10!CL:0000147;5.66e-21;14!CL:0002566;1.56e-19;1!CL:0000710;8.26e-15;20!CL:0000075;4.60e-11;27!CL:0002077;2.08e-08;34!CL:0002567;2.88e-07;3 | |ontology_enrichment_celltype_v019=CL:0000148;3.66e-29;10!CL:0000147;5.66e-21;14!CL:0002566;1.56e-19;1!CL:0000710;8.26e-15;20!CL:0000075;4.60e-11;27!CL:0002077;2.08e-08;34!CL:0002567;2.88e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,3.16e-29,10;CL:0000541,3.16e-29,10;CL:0000147,5.11e-21,14;CL:0002566,1.88e-19,1;CL:0000710,7.69e-15,20;CL:0000075,4.37e-11,27;CL:0002077,7.23e-09,34;CL:0002567,2.47e-07,3;CL:0000333,4.57e-07,41 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.56e-19;1!UBERON:0007297;2.85e-10;2!UBERON:0003056;2.88e-07;3 | |ontology_enrichment_development_v019=UBERON:0005425;3.56e-19;1!UBERON:0007297;2.85e-10;2!UBERON:0003056;2.88e-07;3 | ||
|ontology_enrichment_disease=DOID:1240!1.34e-11!39;DOID:8692!8.42e-11!31;DOID:1036!3.05e-10!8;DOID:2531!1.09e-09!51;DOID:0060083!1.09e-09!51 | |ontology_enrichment_disease=DOID:1240!1.34e-11!39;DOID:8692!8.42e-11!31;DOID:1036!3.05e-10!8;DOID:2531!1.09e-09!51;DOID:0060083!1.09e-09!51 | ||
|ontology_enrichment_disease_v019=DOID:3371;3.56e-19;1!DOID:4549;3.56e-19;1!DOID:5861;3.56e-19;1!DOID:6496;3.56e-19;1 | |ontology_enrichment_disease_v019=DOID:3371;3.56e-19;1!DOID:4549;3.56e-19;1!DOID:5861;3.56e-19;1!DOID:6496;3.56e-19;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3371,2.71e-19,1;DOID:4549,2.71e-19,1;DOID:5861,2.71e-19,1;DOID:6496,2.71e-19,1 | |||
|ontology_enrichment_uberon=UBERON:0002950!1.08e-07!2;UBERON:0001891!1.08e-07!2;UBERON:0009616!1.08e-07!2 | |ontology_enrichment_uberon=UBERON:0002950!1.08e-07!2;UBERON:0001891!1.08e-07!2;UBERON:0009616!1.08e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.56e-19;1!UBERON:0001301;3.56e-19;1!UBERON:0001785;3.56e-19;1!UBERON:0002464;3.56e-19;1!UBERON:0004904;3.56e-19;1!UBERON:0001021;3.56e-19;1!UBERON:0002331;6.36e-17;10!UBERON:0000178;1.67e-11;15!UBERON:0000179;1.67e-11;15!UBERON:0000463;1.67e-11;15!UBERON:0003714;2.85e-10;2!UBERON:0005162;2.85e-10;2!UBERON:0000122;2.85e-10;2!UBERON:0000478;2.08e-07;24!UBERON:0002418;2.88e-07;3!UBERON:0004755;2.88e-07;3!UBERON:0006947;2.88e-07;3!UBERON:0004054;2.88e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0000941;3.56e-19;1!UBERON:0001301;3.56e-19;1!UBERON:0001785;3.56e-19;1!UBERON:0002464;3.56e-19;1!UBERON:0004904;3.56e-19;1!UBERON:0001021;3.56e-19;1!UBERON:0002331;6.36e-17;10!UBERON:0000178;1.67e-11;15!UBERON:0000179;1.67e-11;15!UBERON:0000463;1.67e-11;15!UBERON:0003714;2.85e-10;2!UBERON:0005162;2.85e-10;2!UBERON:0000122;2.85e-10;2!UBERON:0000478;2.08e-07;24!UBERON:0002418;2.88e-07;3!UBERON:0004755;2.88e-07;3!UBERON:0006947;2.88e-07;3!UBERON:0004054;2.88e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.91e-19,1;UBERON:0001785,3.91e-19,1;UBERON:0002464,3.91e-19,1;UBERON:0004904,3.91e-19,1;UBERON:0001021,3.91e-19,1;UBERON:0003902,3.91e-19,1;UBERON:0005425,3.91e-19,1;UBERON:0001301,5.62e-19,1;UBERON:0002331,6.54e-17,10;UBERON:0000358,6.54e-17,10;UBERON:0000307,6.54e-17,10;UBERON:0000091,6.54e-17,10;UBERON:0000087,6.54e-17,10;UBERON:0007010,6.54e-17,10;UBERON:0007806,6.54e-17,10;UBERON:0008780,6.54e-17,10;UBERON:0005728,6.54e-17,10;UBERON:0000178,1.70e-11,15;UBERON:0000179,1.70e-11,15;UBERON:0000463,1.70e-11,15;UBERON:0003714,2.99e-10,2;UBERON:0005162,2.99e-10,2;UBERON:0000122,2.99e-10,2;UBERON:0000478,2.11e-07,24;UBERON:0002418,2.63e-07,3;UBERON:0004755,2.63e-07,3;UBERON:0006947,3.35e-07,3;UBERON:0004054,3.35e-07,3 | |||
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| ||
|short_description=p9@ST8SIA6 | |short_description=p9@ST8SIA6 | ||
}} | }} |
Latest revision as of 11:19, 17 September 2015
Short description: | p9@ST8SIA6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ST8SIA6_5end |
Coexpression cluster: | NA |
Association with transcript: | -283bp_to_ENST00000377610_5end |
EntrezGene: | ST8SIA6 |
HGNC: | 23317 |
UniProt: | B0YJ96 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 3.16e-29 | 10 |
melanoblast | 3.16e-29 | 10 |
pigment cell | 5.11e-21 | 14 |
dark melanocyte | 1.88e-19 | 1 |
neurecto-epithelial cell | 7.69e-15 | 20 |
columnar/cuboidal epithelial cell | 4.37e-11 | 27 |
ecto-epithelial cell | 7.23e-09 | 34 |
light melanocyte | 2.47e-07 | 3 |
migratory neural crest cell | 4.57e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.91e-19 | 1 |
cranial nerve | 3.91e-19 | 1 |
nerve trunk | 3.91e-19 | 1 |
nerve connecting eye with brain | 3.91e-19 | 1 |
nerve | 3.91e-19 | 1 |
retinal neural layer | 3.91e-19 | 1 |
presumptive neural retina | 3.91e-19 | 1 |
epididymis | 5.62e-19 | 1 |
umbilical cord | 6.54e-17 | 10 |
blastocyst | 6.54e-17 | 10 |
blastula | 6.54e-17 | 10 |
bilaminar disc | 6.54e-17 | 10 |
inner cell mass | 6.54e-17 | 10 |
cleaving embryo | 6.54e-17 | 10 |
connecting stalk | 6.54e-17 | 10 |
inner cell mass derived epiblast | 6.54e-17 | 10 |
extraembryonic mesoderm | 6.54e-17 | 10 |
blood | 1.70e-11 | 15 |
haemolymphatic fluid | 1.70e-11 | 15 |
organism substance | 1.70e-11 | 15 |
neural tissue | 2.99e-10 | 2 |
multi cell component structure | 2.99e-10 | 2 |
neuron projection bundle | 2.99e-10 | 2 |
extraembryonic structure | 2.11e-07 | 24 |
cartilage tissue | 2.63e-07 | 3 |
skeletal tissue | 2.63e-07 | 3 |
male genital duct | 3.35e-07 | 3 |
internal male genitalia | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.71e-19 | 1 |
extraosseous chondrosarcoma | 2.71e-19 | 1 |
myxoid chondrosarcoma | 2.71e-19 | 1 |
extraskeletal myxoid chondrosarcoma | 2.71e-19 | 1 |