FFCP PHASE1:Hg19::chr20:61273844..61273862,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=28231 | |EntrezGene=28231 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10953 | |HGNC=10953 | ||
|TSSclassifier=strong | |||
|UniProt=C9JL32 | |UniProt=C9JL32 | ||
|association_with_transcript=5bp_to_ENST00000370512_5end | |association_with_transcript=5bp_to_ENST00000370512_5end | ||
|cluster_id=chr20:61273844..61273862,+ | |||
|description=CAGE_peak_1_at_SLCO4A1_5end | |description=CAGE_peak_1_at_SLCO4A1_5end | ||
|id=chr20:61273844..61273862,+ | |id=chr20:61273844..61273862,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!2.22e-10!235;DOID:14566!3.48e-10!239;DOID:0050687!1.46e-08!143;DOID:305!2.35e-08!106 | |ontology_enrichment_disease=DOID:162!2.22e-10!235;DOID:14566!3.48e-10!239;DOID:0050687!1.46e-08!143;DOID:305!2.35e-08!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:162,6.92e-11,235;DOID:14566,1.89e-10,239;DOID:0050687,7.11e-09,143;DOID:305,2.22e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.61e-23!115;UBERON:0001049!3.92e-11!57;UBERON:0005068!3.92e-11!57;UBERON:0006241!3.92e-11!57;UBERON:0007135!3.92e-11!57;UBERON:0003080!1.17e-08!42;UBERON:0002780!3.79e-08!41;UBERON:0001890!3.79e-08!41;UBERON:0006240!3.79e-08!41;UBERON:0002346!1.06e-07!90;UBERON:0002616!1.57e-07!59;UBERON:0002020!3.51e-07!34;UBERON:0003528!3.51e-07!34;UBERON:0003075!4.71e-07!86;UBERON:0007284!4.71e-07!86 | |ontology_enrichment_uberon=UBERON:0007023!5.61e-23!115;UBERON:0001049!3.92e-11!57;UBERON:0005068!3.92e-11!57;UBERON:0006241!3.92e-11!57;UBERON:0007135!3.92e-11!57;UBERON:0003080!1.17e-08!42;UBERON:0002780!3.79e-08!41;UBERON:0001890!3.79e-08!41;UBERON:0006240!3.79e-08!41;UBERON:0002346!1.06e-07!90;UBERON:0002616!1.57e-07!59;UBERON:0002020!3.51e-07!34;UBERON:0003528!3.51e-07!34;UBERON:0003075!4.71e-07!86;UBERON:0007284!4.71e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;5.06e-07;114 | |ontology_enrichment_uberon_v019=UBERON:0007023;5.06e-07;114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.18e-24,114;UBERON:0001049,1.09e-10,56;UBERON:0005068,1.09e-10,56;UBERON:0006241,1.09e-10,56;UBERON:0007135,1.09e-10,56;UBERON:0000073,4.70e-10,53;UBERON:0002616,4.70e-10,53;UBERON:0002780,1.65e-08,41;UBERON:0001890,1.65e-08,41;UBERON:0003080,1.65e-08,41;UBERON:0006240,1.65e-08,41;UBERON:0003528,1.71e-07,34;UBERON:0002020,1.71e-07,34;UBERON:0002346,1.73e-07,86;UBERON:0000489,6.18e-07,31;UBERON:0000955,7.39e-07,68;UBERON:0006238,7.39e-07,68;UBERON:0001893,7.71e-07,34;UBERON:0003075,8.03e-07,82;UBERON:0007284,8.03e-07,82 | |||
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| ||
|short_description=p1@SLCO4A1 | |short_description=p1@SLCO4A1 | ||
}} | }} |
Latest revision as of 11:09, 17 September 2015
Short description: | p1@SLCO4A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLCO4A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_ENST00000370512_5end |
EntrezGene: | SLCO4A1 |
HGNC: | 10953 |
UniProt: | C9JL32 |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.18e-24 | 114 |
neural tube | 1.09e-10 | 56 |
neural rod | 1.09e-10 | 56 |
future spinal cord | 1.09e-10 | 56 |
neural keel | 1.09e-10 | 56 |
regional part of nervous system | 4.70e-10 | 53 |
regional part of brain | 4.70e-10 | 53 |
regional part of forebrain | 1.65e-08 | 41 |
forebrain | 1.65e-08 | 41 |
anterior neural tube | 1.65e-08 | 41 |
future forebrain | 1.65e-08 | 41 |
brain grey matter | 1.71e-07 | 34 |
gray matter | 1.71e-07 | 34 |
neurectoderm | 1.73e-07 | 86 |
cavitated compound organ | 6.18e-07 | 31 |
brain | 7.39e-07 | 68 |
future brain | 7.39e-07 | 68 |
telencephalon | 7.71e-07 | 34 |
neural plate | 8.03e-07 | 82 |
presumptive neural plate | 8.03e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.92e-11 | 235 |
disease of cellular proliferation | 1.89e-10 | 239 |
cell type cancer | 7.11e-09 | 143 |
carcinoma | 2.22e-08 | 106 |