FFCP PHASE1:Hg19::chr1:29064279..29064293,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51441 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31675 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=17bp_to_ENST00000475796,ENST00000476976_5end | |||
|cluster_id=chr1:29064279..29064293,+ | |||
|description=CAGE_peak_11_at_YTHDF2_5end | |||
|id=chr1:29064279..29064293,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.64e-10!254 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.09e-30;5!CL:0000039;4.55e-22;7!CL:0000586;4.55e-22;7!CL:0002321;2.57e-10;15!CL:0000540;3.15e-07;6!CL:0000404;3.15e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.67e-30,5;CL:0000039,4.69e-22,7;CL:0000586,4.69e-22,7;CL:0000540,2.78e-07,6;CL:0000031,2.78e-07,6;CL:0000404,2.78e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.37e-09;10!UBERON:0005564;4.37e-09;10!CL:0000031;3.15e-07;6 | |||
|ontology_enrichment_disease=DOID:0050687!2.20e-13!143;DOID:162!7.11e-13!235;DOID:14566!1.75e-12!239;DOID:305!9.32e-11!106;DOID:3095!8.17e-10!22;DOID:2994!8.17e-10!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;9.76e-11;22!DOID:2994;9.76e-11;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.17e-10,22;DOID:2994,1.17e-10,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0,0.123121058076788,0,0.313454721478088,0,0.547497700291537,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0.670700859703636,0,0,0,0,0,0,0.472674085820339,0,0.175669571386252,0.0654895377488563,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0,0,0,0.775250277507987,0.35576626268671,0.33472061276467,0.402829317109147,0,0.488124115096339,0,0,0.0892997282840798,0.44905874525234,0.337834441449967,0,0,0.549605231791222,0,0,0.436094052142534,0,0.379891534993739,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0.311211035399766,0.269421344139376,0.163461903113459,0,0,0,0,0,0.448346041655403,0.117434498643765,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0.336672227908132,0,0,0,0,0,0.113432183160021,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95157929807353,1.85541675650079,1.04574548582567,1.0366105501537,0.504641701751257,1.45990943630332,0,0,0,0,0,0,0.337169380156203,0,0,0,0.237270619111097,0,0,0,1.4763109092493,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0.325808305310325,0,1.44331342025273,0.463721619900307,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0.179117045405697,0.290633938513962,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,1.32845119707087,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0.160853921143607,0,0,0.177561725313127,0,0,0,0,0,0.184161977871793,0,0,0,0,0.308061348417659,0.784349769176855,2.92278449306521,0.844413031143006,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0,0,0,0.512900250232778,0.328014645699706,0,0,0.27470839445503,0.41254749960294,0,0,0,0.193341436584244,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0,0.0890320356467374,0.165284915360978,0.192190067365106,0,0.10115778085555,0.464845549297286,0,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0.142283686696828,0.159426272728822,0.199579371432817,0,0.211673582723883,0.324621940274555,0,0,0.156679895773023,2.50634477090067,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0.494411622680279,0.211125408127993,0,0,0.251932747854276,0,0,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0.1137934482855,0.254253650292766,0.472775363535873,0.344743373241465,0,0,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0.113942055847001,2.07507513949254,0.628303510868405,1.08647371922008,0.31900115973192,0.183195186803725,0,0,0,0.166211681900156,0.225595660617181,0,0,0,0.317873157960757,0.421996129056054,0.163232808159148,0,0,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0.234264445725339,0,0,0.242780379534093,0,0,0,0,0.300646838828985,0.414752765588989,0,0.330991955875499,0.627865836814451,0,0.569219092059585,0.138674673013139,0.347119476670262,0,0.0870592065804026,0,0,0.0967563312890851,0.0730893170861856,0.328461828212837,0,0.0882561266915003,0,0.137041924646751,0.19871461170299,0.0633107959558787,0.195551382734803,0,0,0.19980960958213,0,0.343609788497747,0.171594997861965,0,0.248505071130865,0,0,0.523014231561666,0.101998217636322,0.577901179803038,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,2.32991899054908,0.0787831823072236,0.329663433524666,0.26961417541674,0.0984274815147488,0,0,0.136203406111576,0.803765742325096,1.51293380256957,1.24632101408756,0,0,0.0607495566580247,0,0.157611414598396,0,0,0.35857467866569,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0.785270481251171,0,0.122026264901963,0.1251909307065,0,0,0,0.691743174681154,0,0,0,0,0.468334905806882,0.28984205722165,0.298509605773748,0,0,0.189403005275089,0,0,0,0,0,0,0.318593534327405,0,0,0,0,0,0.150257608997218,0,0.406870733204662,0.181848659202559,0.214821114084977,0,0,0,0,0,0,0,0.857766365499703,0,0,0,0,0.358177682162975,0,0.219284049578707,0.176689145945881,0.38582807654183,0.337884881306145,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0.639471856518258,0.215649622793364,0.471797825567689,0.327628914576042,0.33946505990805,0.212574920101683,0.123935764259002,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0.11796972334774,0,0,0,0,0.198916222116275,0,0,0,0.785720083444267,0.163771917510097,0.295712172434091,0.0675375846183947,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0.0657727735628491,0.236387681767936,0.333694205676207,0,0,0.280272163313789,0,0,0.9555033757741,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0.255640214277473,0,0.22910686854405,0,0,0.335566295393377,0,0.243835849964539,0,0,0,0,0,0,0.118920090777569,0.11294608203896,0.769583617218004,0.150962843566674,0,0,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0.199882311849858,0,0,0.0802413666891683,0.730336388246517,0,0,0,0,0,0,0.371995018166751,0,0.432626562123789,1.00933139868063,0.874124575709564,0.506794004045748,0.61193297845189,1.06886962106224,1.74600309116205,0,0.227336094654718,0.803892390468535,0,0,0,0,0,0.186224142887574,0,0,0,0,0.342233301085281,0.134704106029175,0,0,0,1.06727345877715,0,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p11@YTHDF2 | |||
}} |
Latest revision as of 11:03, 17 September 2015
Short description: | p11@YTHDF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_YTHDF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_ENST00000475796, ENST00000476976_5end |
EntrezGene: | YTHDF2 |
HGNC: | 31675 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.67e-30 | 5 |
germ line cell | 4.69e-22 | 7 |
germ cell | 4.69e-22 | 7 |
neuron | 2.78e-07 | 6 |
neuroblast | 2.78e-07 | 6 |
electrically signaling cell | 2.78e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.17e-10 | 22 |
germ cell cancer | 1.17e-10 | 22 |