FFCP PHASE1:Hg19::chr5:180017818..180017830,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:180017818..180017830,- to FFCP PHASE1:Hg19::chr5:180017818..180017830,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=92304 | |EntrezGene=92304 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18384 | |HGNC=18384 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=332bp_to_ENST00000512120_5end | |||
|cluster_id=chr5:180017818..180017830,- | |||
|coexpression_cluster_id=C365 | |||
|description=CAGE_peak_7_at_SCGB3A1_5end | |||
|id=chr5:180017818..180017830,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.33e-29;1!UBERON:0006298;2.73e-29;1!UBERON:0008801;2.73e-29;1!UBERON:0008947;1.50e-09;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.17e-26!115;UBERON:0000153!2.27e-11!129;UBERON:0007811!2.27e-11!129;UBERON:0003408!5.61e-11!10;UBERON:0003127!2.19e-10!2;UBERON:0001829!3.42e-10!2;UBERON:0000341!3.57e-10!2;UBERON:0000369!6.52e-10!4;UBERON:0002435!6.52e-10!4;UBERON:0000204!6.52e-10!4;UBERON:0010082!6.52e-10!4;UBERON:0001869!2.28e-08!32;UBERON:0002020!7.53e-08!34;UBERON:0003528!7.53e-08!34;UBERON:0002780!8.03e-08!41;UBERON:0001890!8.03e-08!41;UBERON:0006240!8.03e-08!41;UBERON:0001893!8.34e-08!34;UBERON:0001049!1.34e-07!57;UBERON:0005068!1.34e-07!57;UBERON:0006241!1.34e-07!57;UBERON:0007135!1.34e-07!57;UBERON:0003080!1.34e-07!42;UBERON:0002420!1.51e-07!9;UBERON:0007245!1.51e-07!9;UBERON:0010009!1.51e-07!9;UBERON:0010011!1.51e-07!9;UBERON:0000454!1.51e-07!9;UBERON:0002308!1.57e-07!9;UBERON:0000125!1.57e-07!9;UBERON:0000033!1.67e-07!123;UBERON:0001044!2.42e-07!6;UBERON:0003293!2.42e-07!6;UBERON:0003294!2.42e-07!6;UBERON:0010047!2.42e-07!6;UBERON:0000167!2.42e-07!6;UBERON:0000974!2.76e-07!10;UBERON:0002616!2.86e-07!59;UBERON:0003056!5.05e-07!61;UBERON:0000955!6.72e-07!69;UBERON:0006238!6.72e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;1.13e-57;2!UBERON:0001829;1.13e-56;2!UBERON:0001831;2.73e-29;1!UBERON:0001736;2.73e-29;1!UBERON:0002171;2.73e-29;1!UBERON:0006518;2.73e-29;1!UBERON:0008949;2.73e-29;1!UBERON:0000101;2.73e-29;1!UBERON:0001567;2.73e-29;1!UBERON:0002167;2.73e-29;1!UBERON:0001044;1.04e-19;6!UBERON:0003293;1.04e-19;6!UBERON:0003294;1.04e-19;6!UBERON:0010047;1.04e-19;6!UBERON:0003408;1.04e-19;6!UBERON:0000167;1.04e-19;6!UBERON:0003126;2.46e-17;7!UBERON:0001005;2.46e-17;7!UBERON:0000341;2.21e-15;2!UBERON:0004089;2.21e-15;2!UBERON:0001041;4.95e-09;14!UBERON:0007196;1.27e-08;15!UBERON:0001558;1.27e-08;15!UBERON:0005181;5.52e-07;35!UBERON:0000161;6.77e-07;19!UBERON:0000166;6.77e-07;19!UBERON:0005178;6.82e-07;34!UBERON:0002224;6.82e-07;34!UBERON:0001004;8.64e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,1.13e-57,2;UBERON:0001829,2.00e-56,2;UBERON:0002171,1.78e-29,1;UBERON:0006518,1.78e-29,1;UBERON:0008949,1.78e-29,1;UBERON:0000101,1.78e-29,1;UBERON:0002167,1.78e-29,1;UBERON:0001736,3.16e-29,1;UBERON:0006298,3.16e-29,1;UBERON:0001831,4.20e-29,1;UBERON:0001567,4.20e-29,1;UBERON:0008801,4.20e-29,1;UBERON:0001044,1.26e-19,6;UBERON:0003293,1.26e-19,6;UBERON:0003294,1.26e-19,6;UBERON:0010047,1.26e-19,6;UBERON:0000167,1.26e-19,6;UBERON:0003126,2.46e-17,7;UBERON:0001005,2.46e-17,7;UBERON:0000341,2.05e-15,2;UBERON:0004089,2.74e-15,2;UBERON:0003408,3.34e-12,10;UBERON:0001004,6.69e-10,74;UBERON:0007196,1.27e-08,15;UBERON:0001558,1.27e-08,15;UBERON:0001041,1.84e-08,87;UBERON:0005178,2.93e-08,34;UBERON:0002224,2.93e-08,34;UBERON:0005181,4.84e-08,35;UBERON:0008947,1.86e-07,38;UBERON:0003258,1.86e-07,38 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.427149650270779,0,1.65695622138878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,1.09651553371436,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0.131545547125698,0,0,0.156986185701028,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,1.37618785021362,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49263787330687,0.952257725854961,0.452122368852043,0.186224142887574,0,0,0,0,0,0.0673520530145875,7.17222053926764,10.9777917660184,0,0,0,0,2.34640942403454,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.427149650270779,0,1.65695622138878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,1.09651553371436,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0.131545547125698,0,0,0.156986185701028,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,1.37618785021362,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49263787330687,0.952257725854961,0.452122368852043,0.186224142887574,0,0,0,0,0,0.0673520530145875,7.17222053926764,10.9777917660184,0,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p7@SCGB3A1 | |||
}} | }} |
Latest revision as of 10:41, 17 September 2015
Short description: | p7@SCGB3A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SCGB3A1_5end |
Coexpression cluster: | C365_trachea_throat_aorta_lung_parotid_salivary_umbilical |
Association with transcript: | 332bp_to_ENST00000512120_5end |
EntrezGene: | SCGB3A1 |
HGNC: | 18384 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 1.13e-57 | 2 |
major salivary gland | 2.00e-56 | 2 |
lower lobe of right lung | 1.78e-29 | 1 |
right lung lobe | 1.78e-29 | 1 |
lower lobe of lung | 1.78e-29 | 1 |
lobe of lung | 1.78e-29 | 1 |
right lung | 1.78e-29 | 1 |
submandibular gland | 3.16e-29 | 1 |
submandibular gland primordium | 3.16e-29 | 1 |
parotid gland | 4.20e-29 | 1 |
cheek | 4.20e-29 | 1 |
parotid gland primordium | 4.20e-29 | 1 |
saliva-secreting gland | 1.26e-19 | 6 |
gland of oral region | 1.26e-19 | 6 |
gland of foregut | 1.26e-19 | 6 |
oral gland | 1.26e-19 | 6 |
oral cavity | 1.26e-19 | 6 |
trachea | 2.46e-17 | 7 |
respiratory airway | 2.46e-17 | 7 |
throat | 2.05e-15 | 2 |
midface | 2.74e-15 | 2 |
gland of gut | 3.34e-12 | 10 |
respiratory system | 6.69e-10 | 74 |
tracheobronchial tree | 1.27e-08 | 15 |
lower respiratory tract | 1.27e-08 | 15 |
foregut | 1.84e-08 | 87 |
thoracic cavity element | 2.93e-08 | 34 |
thoracic cavity | 2.93e-08 | 34 |
thoracic segment organ | 4.84e-08 | 35 |
respiratory primordium | 1.86e-07 | 38 |
endoderm of foregut | 1.86e-07 | 38 |