FFCP PHASE1:Hg19::chr5:180017818..180017830,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92304 | |EntrezGene=92304 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18384 | |HGNC=18384 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=332bp_to_ENST00000512120_5end | |association_with_transcript=332bp_to_ENST00000512120_5end | ||
|cluster_id=chr5:180017818..180017830,- | |||
|coexpression_cluster_id=C365 | |coexpression_cluster_id=C365 | ||
|description=CAGE_peak_7_at_SCGB3A1_5end | |description=CAGE_peak_7_at_SCGB3A1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.33e-29;1!UBERON:0006298;2.73e-29;1!UBERON:0008801;2.73e-29;1!UBERON:0008947;1.50e-09;29 | |ontology_enrichment_development_v019=UBERON:0000358;1.33e-29;1!UBERON:0006298;2.73e-29;1!UBERON:0008801;2.73e-29;1!UBERON:0008947;1.50e-09;29 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p7@SCGB3A1 | |short_description=p7@SCGB3A1 | ||
}} | }} |
Latest revision as of 10:41, 17 September 2015
Short description: | p7@SCGB3A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SCGB3A1_5end |
Coexpression cluster: | C365_trachea_throat_aorta_lung_parotid_salivary_umbilical |
Association with transcript: | 332bp_to_ENST00000512120_5end |
EntrezGene: | SCGB3A1 |
HGNC: | 18384 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 1.13e-57 | 2 |
major salivary gland | 2.00e-56 | 2 |
lower lobe of right lung | 1.78e-29 | 1 |
right lung lobe | 1.78e-29 | 1 |
lower lobe of lung | 1.78e-29 | 1 |
lobe of lung | 1.78e-29 | 1 |
right lung | 1.78e-29 | 1 |
submandibular gland | 3.16e-29 | 1 |
submandibular gland primordium | 3.16e-29 | 1 |
parotid gland | 4.20e-29 | 1 |
cheek | 4.20e-29 | 1 |
parotid gland primordium | 4.20e-29 | 1 |
saliva-secreting gland | 1.26e-19 | 6 |
gland of oral region | 1.26e-19 | 6 |
gland of foregut | 1.26e-19 | 6 |
oral gland | 1.26e-19 | 6 |
oral cavity | 1.26e-19 | 6 |
trachea | 2.46e-17 | 7 |
respiratory airway | 2.46e-17 | 7 |
throat | 2.05e-15 | 2 |
midface | 2.74e-15 | 2 |
gland of gut | 3.34e-12 | 10 |
respiratory system | 6.69e-10 | 74 |
tracheobronchial tree | 1.27e-08 | 15 |
lower respiratory tract | 1.27e-08 | 15 |
foregut | 1.84e-08 | 87 |
thoracic cavity element | 2.93e-08 | 34 |
thoracic cavity | 2.93e-08 | 34 |
thoracic segment organ | 4.84e-08 | 35 |
respiratory primordium | 1.86e-07 | 38 |
endoderm of foregut | 1.86e-07 | 38 |