FFCP PHASE1:Hg19::chr11:2357003..2357020,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=36733 | |HGNC=36733 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-2bp_to_ENST00000419125_5end | |association_with_transcript=-2bp_to_ENST00000419125_5end | ||
|cluster_id=chr11:2357003..2357020,- | |||
|description=CAGE_peak_1_at_RPL26P30_5end | |description=CAGE_peak_1_at_RPL26P30_5end | ||
|id=chr11:2357003..2357020,- | |id=chr11:2357003..2357020,- | ||
|ontology_enrichment_celltype=CL:0000548!5.40e-33!679;CL:0000004!5.40e-33!679;CL:0000255!5.40e-33!679;CL:0000012!2.38e-32!682;CL:0000055!1.14e-21!180;CL:0000220!1.42e-18!246;CL:0000003!1.48e-18!722;CL:0002321!1.63e-18!248;CL:0000066!4.21e-18!254;CL:0000144!1.80e-16!625;CL:0002371!1.50e-12!591;CL:0000063!4.24e-10!578;CL:0000222!1.04e-09!119;CL:0000057!5.52e-09!75;CL:0000393!2.38e-08!60;CL:0000211!2.38e-08!60;CL:0000680!3.28e-08!57;CL:0000056!3.28e-08!57;CL:0000355!3.28e-08!57;CL:0000183!4.07e-08!59;CL:0000187!1.11e-07!54;CL:0000077!6.08e-07!19 | |ontology_enrichment_celltype=CL:0000548!5.40e-33!679;CL:0000004!5.40e-33!679;CL:0000255!5.40e-33!679;CL:0000012!2.38e-32!682;CL:0000055!1.14e-21!180;CL:0000220!1.42e-18!246;CL:0000003!1.48e-18!722;CL:0002321!1.63e-18!248;CL:0000066!4.21e-18!254;CL:0000144!1.80e-16!625;CL:0002371!1.50e-12!591;CL:0000063!4.24e-10!578;CL:0000222!1.04e-09!119;CL:0000057!5.52e-09!75;CL:0000393!2.38e-08!60;CL:0000211!2.38e-08!60;CL:0000680!3.28e-08!57;CL:0000056!3.28e-08!57;CL:0000355!3.28e-08!57;CL:0000183!4.07e-08!59;CL:0000187!1.11e-07!54;CL:0000077!6.08e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0000077;5.84e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.16e-19,250;CL:0000066,8.01e-18,253;CL:0000222,4.65e-10,121;CL:0000057,7.57e-09,76;CL:0000393,1.29e-08,61;CL:0000211,1.29e-08,61;CL:0000680,1.76e-08,58;CL:0000056,1.76e-08,58;CL:0000355,1.76e-08,58;CL:0000187,6.02e-08,55;CL:0000077,6.08e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!4.00e-16!239;DOID:162!7.27e-15!235;DOID:0050687!1.47e-10!143;DOID:305!1.77e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,4.00e-16,239;DOID:162,7.27e-15,235;DOID:0050687,1.47e-10,143;DOID:305,1.77e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.05e-11!238;UBERON:0009142!1.05e-11!238;UBERON:0002100!1.77e-11!216;UBERON:0005256!6.48e-11!143;UBERON:0000914!6.45e-10!83;UBERON:0002329!6.45e-10!83;UBERON:0003077!6.45e-10!83;UBERON:0003059!6.45e-10!83;UBERON:0007282!6.45e-10!83;UBERON:0009618!6.45e-10!83;UBERON:0007285!6.45e-10!83;UBERON:0000486!2.25e-08!82;UBERON:0004290!3.84e-08!70;UBERON:0001737!1.56e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.54e-07;9!UBERON:0001557;1.54e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,3.11e-10,199;UBERON:0003104,2.83e-09,160;UBERON:0009142,2.83e-09,160;UBERON:0007503,1.03e-08,78;UBERON:0000486,1.27e-08,83;UBERON:0002329,2.13e-08,71;UBERON:0003059,2.13e-08,71;UBERON:0007282,2.13e-08,71;UBERON:0004290,2.13e-08,71;UBERON:0009618,2.13e-08,71;UBERON:0007524,3.82e-08,73;UBERON:0003077,4.33e-08,72;UBERON:0007285,4.33e-08,72;UBERON:0005256,5.12e-08,122;UBERON:0001737,1.56e-07,9;UBERON:0000490,3.00e-07,148 | |||
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| ||
|short_description=p1@RPL26P30 | |short_description=p1@RPL26P30 | ||
}} | }} |
Latest revision as of 10:18, 17 September 2015
Short description: | p1@RPL26P30 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPL26P30_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_ENST00000419125_5end |
EntrezGene: | NA |
HGNC: | 36733 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.16e-19 | 250 |
epithelial cell | 8.01e-18 | 253 |
mesodermal cell | 4.65e-10 | 121 |
fibroblast | 7.57e-09 | 76 |
electrically responsive cell | 1.29e-08 | 61 |
electrically active cell | 1.29e-08 | 61 |
muscle precursor cell | 1.76e-08 | 58 |
myoblast | 1.76e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.76e-08 | 58 |
muscle cell | 6.02e-08 | 55 |
mesothelial cell | 6.08e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
trunk | 3.11e-10 | 199 |
mesenchyme | 2.83e-09 | 160 |
entire embryonic mesenchyme | 2.83e-09 | 160 |
epithelial vesicle | 1.03e-08 | 78 |
multilaminar epithelium | 1.27e-08 | 83 |
somite | 2.13e-08 | 71 |
presomitic mesoderm | 2.13e-08 | 71 |
presumptive segmental plate | 2.13e-08 | 71 |
dermomyotome | 2.13e-08 | 71 |
trunk paraxial mesoderm | 2.13e-08 | 71 |
dense mesenchyme tissue | 3.82e-08 | 73 |
paraxial mesoderm | 4.33e-08 | 72 |
presumptive paraxial mesoderm | 4.33e-08 | 72 |
trunk mesenchyme | 5.12e-08 | 122 |
larynx | 1.56e-07 | 9 |
unilaminar epithelium | 3.00e-07 | 148 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 4.00e-16 | 239 |
cancer | 7.27e-15 | 235 |
cell type cancer | 1.47e-10 | 143 |
carcinoma | 1.77e-09 | 106 |